Search of human proteins with 31881785

Search of human proteins with 31881785

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31881785 Hermansky-Pudlak syndrome-6 [Homo sapiens]
         (775 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31881785 Hermansky-Pudlak syndrome-6 [Homo sapiens]               1573   0.0  
gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens]       35   0.20 
gi|5174633 receptor for egg jelly-like protein precursor [Homo s...    35   0.27 
gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo...    34   0.59 
gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens]      33   1.0  
gi|4885341 G protein-coupled receptor 6 [Homo sapiens]                 33   1.0  
gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]         33   1.0  
gi|153791781 transmembrane protease, serine 11E2 [Homo sapiens]        33   1.3  
gi|7662162 ALEX2 protein [Homo sapiens]                                33   1.3  
gi|29540562 ALEX2 protein [Homo sapiens]                               33   1.3  
gi|116734708 activin A receptor, type IIB precursor [Homo sapiens]     32   1.7  
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora...    32   2.2  
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]            32   2.2  
gi|40254871 transmembrane protease, serine 11E [Homo sapiens]          32   2.2  
gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2) int...    32   2.9  
gi|239756030 PREDICTED: hypothetical protein [Homo sapiens]            32   2.9  
gi|239750584 PREDICTED: hypothetical protein [Homo sapiens]            32   2.9  
gi|116235472 SH3-domain GRB2-like (endophilin) interacting prote...    32   2.9  
gi|40807452 peroxisome proliferator-activated receptor gamma, co...    32   2.9  
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    32   2.9  
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    32   2.9  
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    32   2.9  
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    32   2.9  
gi|239582755 myosin IG [Homo sapiens]                                  31   3.8  
gi|239756311 PREDICTED: hypothetical protein [Homo sapiens]            31   3.8  
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi...    31   3.8  
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi...    31   3.8  
gi|239744881 PREDICTED: hypothetical protein XP_002344129 [Homo ...    31   3.8  
gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]         31   3.8  
gi|194306623 immunoglobulin superfamily containing leucine-rich ...    31   3.8  

>gi|31881785 Hermansky-Pudlak syndrome-6 [Homo sapiens]
          Length = 775

 Score = 1573 bits (4072), Expect = 0.0
 Identities = 775/775 (100%), Positives = 775/775 (100%)

Query: 1   MKRSGTLRLLSDLSAFGGAARLRELVAGDSAVRVRGSPDGRHLLLLRPPGAVAPQLLVAS 60
           MKRSGTLRLLSDLSAFGGAARLRELVAGDSAVRVRGSPDGRHLLLLRPPGAVAPQLLVAS
Sbjct: 1   MKRSGTLRLLSDLSAFGGAARLRELVAGDSAVRVRGSPDGRHLLLLRPPGAVAPQLLVAS 60

Query: 61  RGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLAEVWGAGVGPGWRPLQSTEL 120
           RGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLAEVWGAGVGPGWRPLQSTEL
Sbjct: 61  RGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLAEVWGAGVGPGWRPLQSTEL 120

Query: 121 CPGGGARVVAVAALRGRLVWCEERQARAEGPSGSPAAAFSHCVCVRTLEPSGEASTSLGR 180
           CPGGGARVVAVAALRGRLVWCEERQARAEGPSGSPAAAFSHCVCVRTLEPSGEASTSLGR
Sbjct: 121 CPGGGARVVAVAALRGRLVWCEERQARAEGPSGSPAAAFSHCVCVRTLEPSGEASTSLGR 180

Query: 181 THVLLHHCPAFGLLASCRQLFLVPTATTWPGVAHVLLIWSPGKGKVMVAAPRLGLSYSKS 240
           THVLLHHCPAFGLLASCRQLFLVPTATTWPGVAHVLLIWSPGKGKVMVAAPRLGLSYSKS
Sbjct: 181 THVLLHHCPAFGLLASCRQLFLVPTATTWPGVAHVLLIWSPGKGKVMVAAPRLGLSYSKS 240

Query: 241 LNPGRGDTWDFRTLLRGLPGLLSPREPLAVHTWAPTPQGLLLLDFGGTVSLLQSHGGTRA 300
           LNPGRGDTWDFRTLLRGLPGLLSPREPLAVHTWAPTPQGLLLLDFGGTVSLLQSHGGTRA
Sbjct: 241 LNPGRGDTWDFRTLLRGLPGLLSPREPLAVHTWAPTPQGLLLLDFGGTVSLLQSHGGTRA 300

Query: 301 VGTLQEAPVGPWGSAALGTFQGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPA 360
           VGTLQEAPVGPWGSAALGTFQGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPA
Sbjct: 301 VGTLQEAPVGPWGSAALGTFQGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPA 360

Query: 361 PGMEDEEELETRGNLRLLSALGLFCVGWEAPQGVELPSAKDLVFEEACGYYQRRSLRGAQ 420
           PGMEDEEELETRGNLRLLSALGLFCVGWEAPQGVELPSAKDLVFEEACGYYQRRSLRGAQ
Sbjct: 361 PGMEDEEELETRGNLRLLSALGLFCVGWEAPQGVELPSAKDLVFEEACGYYQRRSLRGAQ 420

Query: 421 LTPEELRHSSTFRAPQALASILQGHLPPSALLTMLRTELRDYRGLEQLKAQLVAGDDEEA 480
           LTPEELRHSSTFRAPQALASILQGHLPPSALLTMLRTELRDYRGLEQLKAQLVAGDDEEA
Sbjct: 421 LTPEELRHSSTFRAPQALASILQGHLPPSALLTMLRTELRDYRGLEQLKAQLVAGDDEEA 480

Query: 481 GWTELAEQEVARLLRTELIGDQLAQLNTVFQALPTAAWGATLRALQLQLDGNGKLRSQAP 540
           GWTELAEQEVARLLRTELIGDQLAQLNTVFQALPTAAWGATLRALQLQLDGNGKLRSQAP
Sbjct: 481 GWTELAEQEVARLLRTELIGDQLAQLNTVFQALPTAAWGATLRALQLQLDGNGKLRSQAP 540

Query: 541 PDVWKKVLGGITAGKEPPNGILPPFELLCQCLCQLEPRWLPPFVELAQQQGGPGWGAGGP 600
           PDVWKKVLGGITAGKEPPNGILPPFELLCQCLCQLEPRWLPPFVELAQQQGGPGWGAGGP
Sbjct: 541 PDVWKKVLGGITAGKEPPNGILPPFELLCQCLCQLEPRWLPPFVELAQQQGGPGWGAGGP 600

Query: 601 GLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAVLQAVGQLVQKEQWDRALDAGLALG 660
           GLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAVLQAVGQLVQKEQWDRALDAGLALG
Sbjct: 601 GLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAVLQAVGQLVQKEQWDRALDAGLALG 660

Query: 661 PSSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCPPELAPAELLLLLRTYLPDEVGPPT 720
           PSSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCPPELAPAELLLLLRTYLPDEVGPPT
Sbjct: 661 PSSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCPPELAPAELLLLLRTYLPDEVGPPT 720

Query: 721 PFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTPPRDL 775
           PFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTPPRDL
Sbjct: 721 PFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTPPRDL 775


>gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens]
          Length = 1021

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 263 SPREPLAVHTWAPTPQGLLLLDFGGTVSLLQSHGGTRAVGTLQEAPVGPWGSA----ALG 318
           S R+P     W      +  +D GG + L   +    + G LQ + +GP   +    +LG
Sbjct: 309 SGRDPQLQGIWFFNGTEIAHIDAGGVLGLKNDYKERASQGELQVSKLGPKAFSLKIFSLG 368

Query: 319 TF-QGTLACVLGSTLELLDMGSGQLLERKVLSTDRVHLLEPPA 360
              +G   CV+   ++    GS Q+L+RK      VHL +P A
Sbjct: 369 PEDEGAYRCVVAEVMKTRT-GSWQVLQRKQSPDSHVHLRKPAA 410


>gi|5174633 receptor for egg jelly-like protein precursor [Homo
           sapiens]
          Length = 2253

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 30/76 (39%), Positives = 35/76 (46%), Gaps = 8/76 (10%)

Query: 25  LVAGDSAVRVRGSPDGRHLLLLRPPGAVAPQLLVASRG----PGAELERAWPAGQPSPL- 79
           L+ G   + VRG   GR LL LRP    A   +++ RG    P     R W       L 
Sbjct: 41  LLRGAPGLGVRG---GRALLSLRPSAVRAGGAVLSGRGSLCFPHGGTGRRWYCLDLRVLL 97

Query: 80  DAFFLPWPARPALVLV 95
            A  LPWPA PAL LV
Sbjct: 98  SAQRLPWPAAPALALV 113


>gi|171184400 ATP-binding cassette, sub-family B, member 10 [Homo
           sapiens]
          Length = 738

 Score = 33.9 bits (76), Expect = 0.59
 Identities = 37/123 (30%), Positives = 42/123 (34%), Gaps = 20/123 (16%)

Query: 38  PDGRHLLLLRPPGAVAPQLLVASRGPGAELERAWPAGQPSPLDAFFLPWPARPALVLVWE 97
           P    L LL PP    P  L+      A   R      P  L  F    PAR     +W 
Sbjct: 4   PPAWPLRLLEPPSPAEPGRLLPVACVWAAASRV-----PGSLSPFTGLRPAR-----LWG 53

Query: 98  SGLAEVWGAGVGPGWRPLQSTELCPGGGARVVAVAALRGRLVWCEERQARAEGPSGSPAA 157
           +G A +WG G    WR       C GGG       A RG L         A GP      
Sbjct: 54  AGPALLWGVGAARRWR-----SGCRGGGP-----GASRGVLGLARLLGLWARGPGSCRCG 103

Query: 158 AFS 160
           AF+
Sbjct: 104 AFA 106


>gi|21361499 SUMO1/sentrin/SMT3 specific protease 3 [Homo sapiens]
          Length = 574

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 713 PDEVGPPTPFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYED--ILWDPSTP 767
           P    P   F  P   PP  +GLL AL+ + G +G    P   P E+  + W P +P
Sbjct: 177 PQVPSPCCRFDSPRGPPPPRLGLLGALMAEDGVRGSPPVPSGPPMEEDGLRWTPKSP 233


>gi|4885341 G protein-coupled receptor 6 [Homo sapiens]
          Length = 362

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 33/99 (33%), Positives = 41/99 (41%), Gaps = 23/99 (23%)

Query: 587 AQQQGGPGWGAGGPGLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAVLQAVGQLVQK 646
           A   GGP  G  GP       A A LG  G    +LEL   LS+G P  +L AV      
Sbjct: 25  ATAAGGPDTGEWGPP------AAAALGAGGGANGSLELSSQLSAGPPGLLLPAV------ 72

Query: 647 EQWDRALDAG-----------LALGPSSPLLRSEIFKLL 674
             WD  L              +AL  S+P LR+ +F L+
Sbjct: 73  NPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLV 111


>gi|38202209 methyl-CpG binding domain protein 5 [Homo sapiens]
          Length = 1494

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 7/52 (13%)

Query: 550  GITAGKEPPNGILPPFELLCQCLCQLEPRWLPPFVELAQQQGGPGWGAGGPG 601
            G+TA  E PN  LPPF+      C+L+PR  P       QQ   G   GGPG
Sbjct: 1037 GLTALPENPNTTLPPFQ---DTPCELQPRIDPSL----GQQVKDGLVVGGPG 1081


>gi|153791781 transmembrane protease, serine 11E2 [Homo sapiens]
          Length = 423

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)

Query: 666 LRSEIFKLLLAEFAQHRR-LDAHLPLLCRLCP---PELAPAELLLLLRTYLPDEVGPPTP 721
           LR E  K  + +F+Q +  + AH+ L+CR      PE     + L+L   L D VGPP  
Sbjct: 96  LREEFVKSQVIKFSQQKHGVLAHMLLICRFHSTEDPETVDKIVQLVLHEKLQDAVGPPKV 155

Query: 722 FPE 724
            P+
Sbjct: 156 DPQ 158


>gi|7662162 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 13/85 (15%)

Query: 48  PPGAVAPQLLVA----SRGPG--AELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLA 101
           PPG V P    A    + GPG  A  + A   G  SP +A   P PA P       +G A
Sbjct: 178 PPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATP-------TGAA 230

Query: 102 EVWGAGVGPGWRPLQSTELCPGGGA 126
              GA   PG      T + PG  A
Sbjct: 231 APTGAAESPGTSGSPRTAVVPGTSA 255


>gi|29540562 ALEX2 protein [Homo sapiens]
          Length = 632

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 29/85 (34%), Positives = 34/85 (40%), Gaps = 13/85 (15%)

Query: 48  PPGAVAPQLLVA----SRGPG--AELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLA 101
           PPG V P    A    + GPG  A  + A   G  SP +A   P PA P       +G A
Sbjct: 178 PPGTVVPTEAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATP-------TGAA 230

Query: 102 EVWGAGVGPGWRPLQSTELCPGGGA 126
              GA   PG      T + PG  A
Sbjct: 231 APTGAAESPGTSGSPRTAVVPGTSA 255


>gi|116734708 activin A receptor, type IIB precursor [Homo sapiens]
          Length = 512

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 710 TYLPDEVGPPTPFPEPGAEPPLTVGLLKALLEQTGAQ------GWLSGPVLSPY--EDIL 761
           T+LP+  GP   +  P   P L   L  +LL   G         W+      PY   DI 
Sbjct: 114 THLPEAGGPEVTYEPPPTAPTLLTVLAYSLLPIGGLSLIVLLAFWMYRHRKPPYGHVDIH 173

Query: 762 WDPSTPPPTP 771
            DP  PPP+P
Sbjct: 174 EDPGPPPPSP 183


>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
            homolog, Drosophila); translocated to, 4 isoform 1 [Homo
            sapiens]
          Length = 1834

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 693  RLCPPELAPAELLLLLRTYLPDEVGPPTPFPEPGAEPP 730
            RL  PE AP     L R  LP +  PP+P P PGA PP
Sbjct: 1684 RLLEPE-APG----LCRPPLPRDYEPPSPSPAPGAPPP 1716


>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 46/160 (28%), Positives = 57/160 (35%), Gaps = 27/160 (16%)

Query: 17  GGAARLRELVAGDSAVRV-RGSPD----------GRHLLLLRPPGAVAPQLLVASRGPGA 65
           G   R +EL AG S  R  RG P+          G      + PG  APQ L +  GPG 
Sbjct: 68  GSPTRDQELRAGSSCGRAARGFPEPGRGGKTQKWGGGTGTPQSPGPCAPQALASLLGPGK 127

Query: 66  ELERAWPAGQPSPLDAFFLPWPARPALVLVWESG---------LAEVWGAGVGPG----- 111
              R    G  S      LP    PA     E G         LA+   +G  PG     
Sbjct: 128 AGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLPPAS 187

Query: 112 WRPLQSTELCPGGGARVVAVAALRGRLVWCEERQARAEGP 151
            +PL+   L P G     +     GRL+ CE    +   P
Sbjct: 188 LQPLRLPYLAPPGPHDPTSRGP--GRLLTCEPPSRKLPPP 225


>gi|40254871 transmembrane protease, serine 11E [Homo sapiens]
          Length = 423

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 666 LRSEIFKLLLAEFAQHRR-LDAHLPLLCRLCP---PELAPAELLLLLRTYLPDEVGPPTP 721
           LR E  K  + +F+Q +  + AH+ L+CR      PE     + L+L   L D VGPP  
Sbjct: 96  LREEFVKSQVIKFSQQKHGVLAHMLLICRFHSTEDPETVDKIVQLVLHEKLQDAVGPPKV 155

Query: 722 FP 723
            P
Sbjct: 156 DP 157


>gi|223278403 glutamate receptor, ionotropic, delta 2 (Grid2)
           interacting protein [Homo sapiens]
          Length = 1211

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 10/137 (7%)

Query: 577 PRWLPPFVELAQQQGGPGWGAGGPGLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAV 636
           PR  P    L    GGPG G+ GP  P       +      R  AL  ELL  +GR +  
Sbjct: 73  PRVPPSLGVLPAPDGGPGPGS-GPAAP----TTVLRAPRCGRGLALGRELLRLAGRKRPD 127

Query: 637 LQAVGQLVQKEQWDRALDAGLALGPSSPLLRSEIFKLLLAEFAQHRRLDAHLPLLCRLCP 696
                +  + +++ R +D  L      P  + ++F   L +FA  +R+D  L     L  
Sbjct: 128 AVHRERRRKAQEFSRKVDEILG---DQPTAKEQVF-AALKQFAAEQRVD-DLVWTLTLAL 182

Query: 697 PELAPAELLLLLRTYLP 713
           P  A   LL  LR ++P
Sbjct: 183 PREACGPLLDNLRIFIP 199


>gi|239756030 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 24/93 (25%)

Query: 531 GNGKLRSQAPPDVWKKVLGGITAGKEPPNGI-----LPPFELLCQCLCQLEPR------- 578
           G G+   +     W     G TA  +PP        LPP    C C+  L  +       
Sbjct: 9   GCGRSSQEGQGTCWPHQFMGDTALGQPPCSAVGSCPLPPPSWECGCVLLLWIKLPGCWPH 68

Query: 579 ------------WLPPFVELAQQQGGPGWGAGG 599
                       WLPP V  AQ   GPG G+GG
Sbjct: 69  WTGVAVRPCLGAWLPPEVRAAQGGVGPGEGSGG 101


>gi|239750584 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 24/93 (25%)

Query: 531 GNGKLRSQAPPDVWKKVLGGITAGKEPPNGI-----LPPFELLCQCLCQLEPR------- 578
           G G+   +     W     G TA  +PP        LPP    C C+  L  +       
Sbjct: 9   GCGRSSQEGQGTCWPHQFMGDTALGQPPCSAVGSCPLPPPSWECGCVLLLWIKLPGCWPH 68

Query: 579 ------------WLPPFVELAQQQGGPGWGAGG 599
                       WLPP V  AQ   GPG G+GG
Sbjct: 69  WTGVAVRPCLGAWLPPEVRAAQGGVGPGEGSGG 101


>gi|116235472 SH3-domain GRB2-like (endophilin) interacting protein
           1 [Homo sapiens]
          Length = 828

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 713 PDEVGPPTPFPEPGAE-PPLTV-------GLLKALLEQTGAQGWLSGPVLSPYEDILWDP 764
           P  +GPP P   PG   PP  V        + K + EQT  +      + SP +  L   
Sbjct: 349 PGPLGPPGPTGPPGPPGPPRNVLSPLNLEEVQKKVAEQTFIKDDYLETISSPKDFGLGQR 408

Query: 765 STPPPTPP 772
           +TPPP PP
Sbjct: 409 ATPPPPPP 416


>gi|40807452 peroxisome proliferator-activated receptor gamma,
            coactivator-related 1 [Homo sapiens]
          Length = 1664

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 687  HLPLLCRLCPPELAPAELLLL-------LRTYLPDEVGPPTPFPEPGAEPPLTVGLLKAL 739
            + PL    C P ++P+    L       L +  P     P     P A PP  V    + 
Sbjct: 917  YAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPTCSVPWAPPPAPVSPYSST 976

Query: 740  LEQTGAQGWLSGPVLSPYEDILWDPSTPPPTPPRDL 775
                G  GW  GP  +P+    W    PPP PP  +
Sbjct: 977  CTY-GPLGWGPGPQHAPF----WSTVPPPPLPPASI 1007


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 713 PD-EVGPPTPFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTP 771
           PD ++GP + FP P  E    V      L+          P+L P      DPS+PPP P
Sbjct: 722 PDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPT-----DPSSPPPCP 776

Query: 772 P 772
           P
Sbjct: 777 P 777


>gi|20336260 retinoblastoma protein-binding zinc finger protein
           isoform b [Homo sapiens]
          Length = 1682

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 713 PD-EVGPPTPFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTP 771
           PD ++GP + FP P  E    V      L+          P+L P      DPS+PPP P
Sbjct: 923 PDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPT-----DPSSPPPCP 977

Query: 772 P 772
           P
Sbjct: 978 P 978


>gi|20336258 retinoblastoma protein-binding zinc finger protein
           isoform a [Homo sapiens]
          Length = 1718

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 713 PD-EVGPPTPFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPVLSPYEDILWDPSTPPPTP 771
           PD ++GP + FP P  E    V      L+          P+L P      DPS+PPP P
Sbjct: 923 PDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPT-----DPSSPPPCP 977

Query: 772 P 772
           P
Sbjct: 978 P 978


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 16/79 (20%)

Query: 696 PPELAPAELLLLLRTYLPDEVGPP--TPFPEPGAEPPLTVGLLKALLEQTGAQGWLSGPV 753
           PP L PA +L        D+   P   P   P   PPL       LL   G  G  + P 
Sbjct: 234 PPPLPPASVL-------SDKAVKPQLAPLHLPPIPPPLP------LLPPCGYPGLKAEPA 280

Query: 754 LSPYEDILWDPSTPPPTPP 772
            SP +D    P+ PPP PP
Sbjct: 281 -SPAQDAQEPPAPPPPLPP 298


>gi|239582755 myosin IG [Homo sapiens]
          Length = 1018

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 14/128 (10%)

Query: 65  AELERAWPAGQPSPLDAFFLPWPARPALVLVWESGLAEVWGAGVGPGWRPLQSTELCPGG 124
           AEL+R + A +  PL    L WP  PA++  ++     ++       WR  Q  +  P  
Sbjct: 753 AELQRRFQAARQPPLYGRDLVWPLPPAVLQPFQDTCHALFCR-----WRARQLVKNIPPS 807

Query: 125 G-----ARVVAVAALRG-RLVW-CEERQAR--AEGPSGSPAAAFSHCVCVRTLEPSGEAS 175
                 A+V A+ AL+G R  W C    AR      + +P A+      ++TL+      
Sbjct: 808 DMPQIKAKVAAMGALQGLRQDWGCRRAWARDYLSSATDNPTASSLFAQRLKTLQDKDGFG 867

Query: 176 TSLGRTHV 183
             L  +HV
Sbjct: 868 AVLFSSHV 875


>gi|239756311 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 103 VWGAGVGPG---WRPLQSTELCPGGGARVVA--VAALRGRLVWCEERQARAEGPSGSPA- 156
           VWG    PG    R L   +L  G G R  A  +    G  V C + QARA G   + A 
Sbjct: 17  VWGCAPSPGAAAGRRLALQQLAEGRGGRARARGLVGQHGGAVLCPQGQARARGAQAAQAG 76

Query: 157 ----AAFSHCVCVR 166
               AA  H  C++
Sbjct: 77  RAHVAAEVHVQCLQ 90


>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 306

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 689 PLLCRLCPPELAPAELLLLLRTYLPDEVGPPTPFPEPGAEPPLTVGLLKALLEQT-GAQG 747
           P+L R   P L P+   +L R+  P      TP   P + P LT      L   +     
Sbjct: 150 PILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILT 209

Query: 748 WLSGPVLSPYEDILWDPSTPPPTPP 772
             S P L+P    +  PS+ P   P
Sbjct: 210 RSSTPTLTPSSRPILTPSSTPTLTP 234


>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 306

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 689 PLLCRLCPPELAPAELLLLLRTYLPDEVGPPTPFPEPGAEPPLTVGLLKALLEQT-GAQG 747
           P+L R   P L P+   +L R+  P      TP   P + P LT      L   +     
Sbjct: 150 PILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILT 209

Query: 748 WLSGPVLSPYEDILWDPSTPPPTPP 772
             S P L+P    +  PS+ P   P
Sbjct: 210 RSSTPTLTPSSRPILTPSSTPTLTP 234


>gi|239744881 PREDICTED: hypothetical protein XP_002344129 [Homo
           sapiens]
          Length = 159

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 24/93 (25%)

Query: 531 GNGKLRSQAPPDVWKKVLGGITAGKEPPNGI-----LPPFELLCQCLCQLEPR------- 578
           G G+   +     W     G TA  +PP        LPP    C C+  L  +       
Sbjct: 9   GCGRSSQEGQGTCWPHRFMGDTALGQPPCSAVGSCPLPPPSWECGCVLLLWIKLPGCWPH 68

Query: 579 ------------WLPPFVELAQQQGGPGWGAGG 599
                       WLPP V  AQ   GPG G+GG
Sbjct: 69  WTGVAVRPCLGAWLPPEVRAAQGGVGPGEGSGG 101


>gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens]
          Length = 349

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 42/158 (26%), Positives = 61/158 (38%), Gaps = 31/158 (19%)

Query: 592 GPGWGAGGPGLPLYRRALAVLGEEGTRPEALELELLLSSGRPKAVLQAVGQLV------- 644
           GPG    GPGLP   +  AV+          E E LL    P  +LQ    L+       
Sbjct: 61  GPGKKEWGPGLPSQAQDGAVVTATRQASRLPEAEGLLPEQSPAGLLQDKDLLLGLALPYP 120

Query: 645 QKEQ----WDRA---------------LDAGLAL--GPSSPLLRSEIFKLLLAEFAQHRR 683
           +KE     W+R                L  G AL  GPSS + ++E+ +  + + A    
Sbjct: 121 EKENRPPGWERTRKRSREHKRRRDRLRLHQGRALVRGPSSLMKKAELSEAQVLDAAMEES 180

Query: 684 LDAHLPLLCRLCPPELAPA---ELLLLLRTYLPDEVGP 718
             +  P +  L   E APA    L+L + +  P +  P
Sbjct: 181 STSLAPTMFFLTTFEAAPATEESLILPVTSLRPQQAQP 218


>gi|194306623 immunoglobulin superfamily containing leucine-rich
           repeat 2 [Homo sapiens]
          Length = 745

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 7/37 (18%)

Query: 100 LAEVWGAGVG-------PGWRPLQSTELCPGGGARVV 129
           LA  WG G G       PG RPL+   LCP GG   V
Sbjct: 505 LAARWGPGPGGAGGAPRPGRRPLRLLYLCPAGGGAAV 541


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,927,696
Number of Sequences: 37866
Number of extensions: 2225149
Number of successful extensions: 7521
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 7438
Number of HSP's gapped (non-prelim): 145
length of query: 775
length of database: 18,247,518
effective HSP length: 110
effective length of query: 665
effective length of database: 14,082,258
effective search space: 9364701570
effective search space used: 9364701570
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.