FXN 25689

Name: FXN	Sequence: fasta or formatted (196aa)		NCBI GI: 31742516
Description: frataxin isoform 2 preproprotein		Referenced in: Heme Iron, Copper, and Arsenic Metabolism
Other entries for this name: alt prot [171aa] frataxin isoform 3 preproprotein alt prot [210aa] frataxin isoform 1 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 13 1 C cysteine 2.6 5 1 D aspartate 5.1 10 1 E glutamate 4.1 8 2 F phenylalanine 2.0 4 2 G glycine 8.2 16 2 H histidine 0.5 1 1 I isoleucine 2.0 4 1 K lysine 4.6 9 2 L leucine 11.7 23 2 M methionine 2.0 4 1 N asparagine 3.1 6 1 P proline 7.1 14 1 Q glutamine 4.1 8 1 R arginine 6.6 13 2 S serine 9.2 18 2 T threonine 9.7 19 2 V valine 5.6 11 2 W tryptophan 2.0 4 1 Y tyrosine 3.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 frataxin isoform 2 preproprotein FXN 0.801 frataxin isoform 3 preproprotein FXN 0.796 frataxin isoform 1 preproprotein USP54 0.019 ubiquitin specific peptidase 54 LOC100130897 0.016 PREDICTED: hypothetical protein LOC100130897 0.016 PREDICTED: hypothetical protein DENND4B 0.013 DENN/MADD domain containing 4B SASH3 0.013 SAM and SH3 domain containing 3 STAT3 0.013 signal transducer and activator of transcription 3 i... STAT3 0.013 signal transducer and activator of transcription 3 i... STAT3 0.013 signal transducer and activator of transcription 3 i... LOC100290893 0.011 PREDICTED: hypothetical protein XP_002347938 LOC100288361 0.011 PREDICTED: hypothetical protein XP_002344205 C19orf55 0.011 hypothetical protein LOC148137 ADCY5 0.011 adenylate cyclase 5 SHC4 0.008 rai-like protein LOC100293935 0.008 PREDICTED: hypothetical protein LOC100287289 0.008 PREDICTED: hypothetical protein LOC100287289 0.008 PREDICTED: hypothetical protein XP_002343656 LOC100130128 0.008 PREDICTED: hypothetical protein LOC100130128 0.008 PREDICTED: hypothetical protein LOC100130128 0.008 PREDICTED: hypothetical protein CP 0.008 ceruloplasmin precursor KDM5B 0.005 jumonji, AT rich interactive domain 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.