FXN 23527

Name: FXN	Sequence: fasta or formatted (171aa)		NCBI GI: 239787198
Description: frataxin isoform 3 preproprotein		Referenced in: Heme Iron, Copper, and Arsenic Metabolism
Other entries for this name: alt prot [210aa] frataxin isoform 1 preproprotein alt prot [196aa] frataxin isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 12 1 C cysteine 1.2 2 1 D aspartate 5.3 9 1 E glutamate 4.7 8 2 F phenylalanine 2.9 5 2 G glycine 7.6 13 2 H histidine 1.2 2 1 I isoleucine 2.3 4 1 K lysine 4.1 7 2 L leucine 14.0 24 2 M methionine 1.2 2 1 N asparagine 3.5 6 1 P proline 6.4 11 1 Q glutamine 4.1 7 1 R arginine 7.6 13 2 S serine 7.6 13 2 T threonine 8.8 15 2 V valine 4.7 8 1 W tryptophan 2.9 5 1 Y tyrosine 2.9 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 frataxin isoform 3 preproprotein FXN 0.924 frataxin isoform 2 preproprotein FXN 0.917 frataxin isoform 1 preproprotein USP54 0.021 ubiquitin specific peptidase 54 LOC100130897 0.018 PREDICTED: hypothetical protein LOC100130897 0.018 PREDICTED: hypothetical protein DENND4B 0.015 DENN/MADD domain containing 4B SASH3 0.015 SAM and SH3 domain containing 3 STAT3 0.015 signal transducer and activator of transcription 3 i... STAT3 0.015 signal transducer and activator of transcription 3 i... STAT3 0.015 signal transducer and activator of transcription 3 i... LOC100290893 0.012 PREDICTED: hypothetical protein XP_002347938 LOC100288361 0.012 PREDICTED: hypothetical protein XP_002344205 C19orf55 0.012 hypothetical protein LOC148137 ADCY5 0.012 adenylate cyclase 5 SHC4 0.009 rai-like protein LOC100293935 0.009 PREDICTED: hypothetical protein LOC100287289 0.009 PREDICTED: hypothetical protein LOC100287289 0.009 PREDICTED: hypothetical protein XP_002343656 LOC100130128 0.009 PREDICTED: hypothetical protein LOC100130128 0.009 PREDICTED: hypothetical protein LOC100130128 0.009 PREDICTED: hypothetical protein CP 0.009 ceruloplasmin precursor KDM5B 0.006 jumonji, AT rich interactive domain 1B TDP1 0.006 tyrosyl-DNA phosphodiesterase 1 TDP1 0.006 tyrosyl-DNA phosphodiesterase 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.