FXN 25339

Name: FXN	Sequence: fasta or formatted (210aa)		NCBI GI: 31077081
Description: frataxin isoform 1 preproprotein		Referenced in: Heme Iron, Copper, and Arsenic Metabolism
Other entries for this name: alt prot [171aa] frataxin isoform 3 preproprotein alt prot [196aa] frataxin isoform 2 preproprotein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 17 2 C cysteine 1.0 2 1 D aspartate 6.2 13 1 E glutamate 4.8 10 2 F phenylalanine 1.9 4 2 G glycine 8.1 17 2 H histidine 1.4 3 1 I isoleucine 1.9 4 1 K lysine 6.2 13 2 L leucine 13.3 28 2 M methionine 1.0 2 1 N asparagine 3.3 7 1 P proline 5.2 11 1 Q glutamine 3.3 7 1 R arginine 6.2 13 2 S serine 9.0 19 2 T threonine 8.1 17 2 V valine 4.8 10 1 W tryptophan 2.4 5 1 Y tyrosine 3.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 frataxin isoform 1 preproprotein FXN 0.746 frataxin isoform 2 preproprotein FXN 0.746 frataxin isoform 3 preproprotein LOC100130897 0.015 PREDICTED: hypothetical protein LOC100130897 0.015 PREDICTED: hypothetical protein SASH3 0.012 SAM and SH3 domain containing 3 STAT3 0.012 signal transducer and activator of transcription 3 i... STAT3 0.012 signal transducer and activator of transcription 3 i... STAT3 0.012 signal transducer and activator of transcription 3 i... LOC100290893 0.010 PREDICTED: hypothetical protein XP_002347938 LOC100288361 0.010 PREDICTED: hypothetical protein XP_002344205 ADCY5 0.010 adenylate cyclase 5 UEVLD 0.010 ubiquitin-conjugating enzyme E2-like isoform a [Hom... UEVLD 0.010 ubiquitin-conjugating enzyme E2-like isoform b [Hom... C19orf55 0.010 hypothetical protein LOC148137 SHC4 0.007 rai-like protein LOC100293935 0.007 PREDICTED: hypothetical protein LOC100287289 0.007 PREDICTED: hypothetical protein LOC100287289 0.007 PREDICTED: hypothetical protein XP_002343656 LOC100130128 0.007 PREDICTED: hypothetical protein LOC100130128 0.007 PREDICTED: hypothetical protein LOC100130128 0.007 PREDICTED: hypothetical protein CP 0.007 ceruloplasmin precursor KDM5B 0.005 jumonji, AT rich interactive domain 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.