Search of human proteins with 31563392

Search of human proteins with 31563392

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo ...   335   1e-92
gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Hom...   285   2e-77
gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo ...   223   8e-59
gi|31563396 chemokine-like factor superfamily 1 isoform 3 [Homo ...   206   6e-54
gi|31563398 chemokine-like factor superfamily 1 isoform 4 [Homo ...   206   8e-54
gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Hom...   172   9e-44
gi|31563402 chemokine-like factor superfamily 1 isoform 5 [Homo ...    94   4e-20
gi|8393581 chemokine-like factor isoform a [Homo sapiens]              88   3e-18
gi|93141024 chemokine-like factor isoform e [Homo sapiens]             81   4e-16
gi|32307156 chemokine-like factor isoform d [Homo sapiens]             59   2e-09
gi|31563424 chemokine-like factor superfamily 1 isoform 12 [Homo...    58   3e-09
gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]         52   2e-07
gi|4505893 proteolipid protein 2 (colonic epithelium-enriched) [...    49   2e-06
gi|32307154 chemokine-like factor isoform b [Homo sapiens]             37   0.011
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]        35   0.040
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]         35   0.040
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]         35   0.040
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]         35   0.040
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ...    31   0.58 
gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ...    31   0.58 
gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]         29   2.2  
gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]          29   2.2  

>gi|31563392 chemokine-like factor superfamily 1 isoform 1 [Homo
           sapiens]
          Length = 169

 Score =  335 bits (858), Expect = 1e-92
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
           MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF
Sbjct: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60

Query: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV 120
           ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV
Sbjct: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV 120

Query: 121 IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 169
           IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA
Sbjct: 121 IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 169


>gi|148743783 chemokine-like factor superfamily 1 isoform 13 [Homo
           sapiens]
          Length = 286

 Score =  285 bits (728), Expect = 2e-77
 Identities = 148/159 (93%), Positives = 150/159 (94%), Gaps = 4/159 (2%)

Query: 11  SEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 70
           S +P+G LK       LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH
Sbjct: 132 SFSPTGMLK----ILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 187

Query: 71  LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVV 130
           LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVV
Sbjct: 188 LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVV 247

Query: 131 TTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 169
           TTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA
Sbjct: 248 TTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 286



 Score = 58.5 bits (140), Expect = 3e-09
 Identities = 27/28 (96%), Positives = 28/28 (100%)

Query: 1  MDPEHAKPESSEAPSGNLKQPETAAALS 28
          MDPEHAKPESSEAPSGNLKQPETAAAL+
Sbjct: 1  MDPEHAKPESSEAPSGNLKQPETAAALA 28


>gi|31563394 chemokine-like factor superfamily 1 isoform 2 [Homo
           sapiens]
          Length = 114

 Score =  223 bits (567), Expect = 8e-59
 Identities = 113/113 (100%), Positives = 113/113 (100%)

Query: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
           MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF
Sbjct: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60

Query: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
           ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113


>gi|31563396 chemokine-like factor superfamily 1 isoform 3 [Homo
           sapiens]
          Length = 122

 Score =  206 bits (525), Expect = 6e-54
 Identities = 117/169 (69%), Positives = 119/169 (70%), Gaps = 47/169 (27%)

Query: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
           MDPEHAKPESSEAPSGNLKQPETAAAL              A+   +             
Sbjct: 1   MDPEHAKPESSEAPSGNLKQPETAAAL--------------ASSGSV------------- 33

Query: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV 120
                               DLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV
Sbjct: 34  --------------------DLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV 73

Query: 121 IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 169
           IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA
Sbjct: 74  IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 122


>gi|31563398 chemokine-like factor superfamily 1 isoform 4 [Homo
           sapiens]
          Length = 116

 Score =  206 bits (524), Expect = 8e-54
 Identities = 116/169 (68%), Positives = 116/169 (68%), Gaps = 53/169 (31%)

Query: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
           MDPEHAKPESSEAPSGNLKQPETAAA                                  
Sbjct: 1   MDPEHAKPESSEAPSGNLKQPETAAA---------------------------------- 26

Query: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV 120
                              LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV
Sbjct: 27  -------------------LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAV 67

Query: 121 IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 169
           IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA
Sbjct: 68  IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPETGPDAPQRPA 116


>gi|148743778 chemokine-like factor superfamily 1 isoform 14 [Homo
           sapiens]
          Length = 231

 Score =  172 bits (437), Expect = 9e-44
 Identities = 92/103 (89%), Positives = 94/103 (91%), Gaps = 4/103 (3%)

Query: 11  SEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 70
           S +P+G LK       LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH
Sbjct: 132 SFSPTGMLK----ILRLSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHH 187

Query: 71  LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
           LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 188 LLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 230



 Score = 58.5 bits (140), Expect = 3e-09
 Identities = 27/28 (96%), Positives = 28/28 (100%)

Query: 1  MDPEHAKPESSEAPSGNLKQPETAAALS 28
          MDPEHAKPESSEAPSGNLKQPETAAAL+
Sbjct: 1  MDPEHAKPESSEAPSGNLKQPETAAALA 28


>gi|31563402 chemokine-like factor superfamily 1 isoform 5 [Homo
           sapiens]
          Length = 61

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 60/113 (53%), Positives = 60/113 (53%), Gaps = 53/113 (46%)

Query: 1   MDPEHAKPESSEAPSGNLKQPETAAALSLILGALACFIITQANESFITITSLEICIVVFF 60
           MDPEHAKPESSEAPSGNLKQPETAAA                                  
Sbjct: 1   MDPEHAKPESSEAPSGNLKQPETAAA---------------------------------- 26

Query: 61  ILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 113
                              LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG
Sbjct: 27  -------------------LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGG 60


>gi|8393581 chemokine-like factor isoform a [Homo sapiens]
          Length = 152

 Score = 88.2 bits (217), Expect = 3e-18
 Identities = 45/112 (40%), Positives = 71/112 (63%), Gaps = 3/112 (2%)

Query: 27  LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
           L+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ +L WPLLD+ NS+
Sbjct: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85

Query: 87  ITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCI-DAFVVTTKMRTN 137
           +T VF+ +V++LA+  +     L VGG +      VCC+ D  ++  K+  N
Sbjct: 86  VTTVFMLIVSVLALIPETT--TLTVGGGVFALVTAVCCLADGALIYRKLLFN 135


>gi|93141024 chemokine-like factor isoform e [Homo sapiens]
          Length = 113

 Score = 81.3 bits (199), Expect = 4e-16
 Identities = 40/89 (44%), Positives = 61/89 (68%), Gaps = 2/89 (2%)

Query: 27  LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
           L+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ +L WPLLD+ NS+
Sbjct: 26  LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPLLDIINSL 85

Query: 87  ITAVFLSVVAILAMQEKKRRHLLYVGGSL 115
           +T VF+ +V++LA+  +     L VGG L
Sbjct: 86  VTTVFMLIVSVLALIPETT--TLTVGGGL 112


>gi|32307156 chemokine-like factor isoform d [Homo sapiens]
          Length = 120

 Score = 58.9 bits (141), Expect = 2e-09
 Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 2/64 (3%)

Query: 27 LSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSI 86
          L+L + ++  FII QA E +I IT  E+ +++FFIL+YVL L  L+ +L WPL  L  ++
Sbjct: 26 LALTVTSMTFFIIAQAPEPYIVITGFEVTVILFFILLYVLRLDRLMKWLFWPL--LVFAL 83

Query: 87 ITAV 90
          +TAV
Sbjct: 84 VTAV 87


>gi|31563424 chemokine-like factor superfamily 1 isoform 12 [Homo
          sapiens]
          Length = 28

 Score = 58.2 bits (139), Expect = 3e-09
 Identities = 27/27 (100%), Positives = 27/27 (100%)

Query: 1  MDPEHAKPESSEAPSGNLKQPETAAAL 27
          MDPEHAKPESSEAPSGNLKQPETAAAL
Sbjct: 1  MDPEHAKPESSEAPSGNLKQPETAAAL 27


>gi|21389567 chemokine-like factor superfamily 2 [Homo sapiens]
          Length = 248

 Score = 52.0 bits (123), Expect = 2e-07
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 20/150 (13%)

Query: 33  ALACFIITQANESFIT-------ITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNS 85
           +L C I      S +T       I ++EI    FFIL+Y   +H  + ++ WP+ DL N 
Sbjct: 94  SLGCLIAAMILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFND 153

Query: 86  IITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKRFLGVE 145
           +I   FL    + A++ ++  +L Y+   L +  +    + AF+     R +   F G +
Sbjct: 154 LIACAFLVGAVVFAVRSRRSMNLHYL---LAVILIGAAGVFAFIDVCLQRNH---FRGKK 207

Query: 146 VERKL---SPAKDAYPETG----PDAPQRP 168
            ++ +    P K+  P+ G    P  P  P
Sbjct: 208 AKKHMLVPPPGKEKGPQQGKGPEPAKPPEP 237


>gi|4505893 proteolipid protein 2 (colonic epithelium-enriched)
           [Homo sapiens]
          Length = 152

 Score = 48.9 bits (115), Expect = 2e-06
 Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 25  AALSLILGALACFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTN 84
           A + L L  L CF  + +   + +++ +E+ +   F ++Y+  LH  + +++WP  D   
Sbjct: 30  AEIILCLVILICF--SASTPGYSSLSVIEMILAAIFFVVYMCDLHTKIPFINWPWSDFFR 87

Query: 85  SIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFV 129
           ++I A+   + +I+ + E +  H   V G L L A  +   DA+V
Sbjct: 88  TLIAAILYLITSIVVLVE-RGNHSKIVAGVLGLIATCLFGYDAYV 131


>gi|32307154 chemokine-like factor isoform b [Homo sapiens]
          Length = 99

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 80  LDLTNSIITAVFLSVVAILAMQEKKRRHLLYVGGSLCLTAVIVCCI-DAFVVTTKMRTN 137
           LD+ NS++T VF+ +V++LA+  +     L VGG +      VCC+ D  ++  K+  N
Sbjct: 26  LDIINSLVTTVFMLIVSVLALIPETT--TLTVGGGVFALVTAVCCLADGALIYRKLLFN 82


>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 36  CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
           C++ + A+ +F+T   LE  + ++F+    + L+     L WP++D    +  A+    +
Sbjct: 58  CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116

Query: 96  AILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
           +I A+  K         G     A IV   D +++   +   LK+
Sbjct: 117 SITAI-AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ 160


>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 36  CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
           C++ + A+ +F+T   LE  + ++F+    + L+     L WP++D    +  A+    +
Sbjct: 58  CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116

Query: 96  AILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
           +I A+  K         G     A IV   D +++   +   LK+
Sbjct: 117 SITAI-AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ 160


>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 36  CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
           C++ + A+ +F+T   LE  + ++F+    + L+     L WP++D    +  A+    +
Sbjct: 58  CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116

Query: 96  AILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
           +I A+  K         G     A IV   D +++   +   LK+
Sbjct: 117 SITAI-AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ 160


>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
          Length = 182

 Score = 34.7 bits (78), Expect = 0.040
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 36  CFIITQANESFITITSLEICIVVFFILIYVLTLHHLLTYLHWPLLDLTNSIITAVFLSVV 95
           C++ + A+ +F+T   LE  + ++F+    + L+     L WP++D    +  A+    +
Sbjct: 58  CYVASSAS-AFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAI 116

Query: 96  AILAMQEKKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
           +I A+  K         G     A IV   D +++   +   LK+
Sbjct: 117 SITAI-AKYSDGASKAAGVFGFFATIVFATDFYLIFNDVAKFLKQ 160


>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
           sapiens]
          Length = 208

 Score = 30.8 bits (68), Expect = 0.58
 Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 46  FITITSLEICIVVFFILI-YVLTLHHLLTYLHWPLLDLTNSIITA--VFLSVVAILAMQE 102
           F    S    +V   +LI + L LH  +  ++W L DL N+ ++A   F++ + + A+  
Sbjct: 86  FFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNH 145

Query: 103 KKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
           +    +  V      TA     ++ F+   K R ++++
Sbjct: 146 RAGAEIAAVIFGFLATAAY--AVNTFLAVQKWRVSVRQ 181


>gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo
           sapiens]
          Length = 234

 Score = 30.8 bits (68), Expect = 0.58
 Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 46  FITITSLEICIVVFFILI-YVLTLHHLLTYLHWPLLDLTNSIITA--VFLSVVAILAMQE 102
           F    S    +V   +LI + L LH  +  ++W L DL N+ ++A   F++ + + A+  
Sbjct: 86  FFEFVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLAALNH 145

Query: 103 KKRRHLLYVGGSLCLTAVIVCCIDAFVVTTKMRTNLKR 140
           +    +  V      TA     ++ F+   K R ++++
Sbjct: 146 RAGAEIAAVIFGFLATAAY--AVNTFLAVQKWRVSVRQ 181


>gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]
          Length = 386

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 10/69 (14%)

Query: 101 QEKKRRHLLYVGGSLCLTAV-IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPE 159
           +E+K + LLY   +LC  AV  +  ++A    TK +T L      E    L P K AYP 
Sbjct: 193 EEEKAKRLLYC--ALCKVAVNSLSQLEAHNKGTKHKTIL------EARSGLGPIK-AYPR 243

Query: 160 TGPDAPQRP 168
            GP  P  P
Sbjct: 244 LGPPTPGEP 252


>gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]
          Length = 366

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 10/69 (14%)

Query: 101 QEKKRRHLLYVGGSLCLTAV-IVCCIDAFVVTTKMRTNLKRFLGVEVERKLSPAKDAYPE 159
           +E+K + LLY   +LC  AV  +  ++A    TK +T L      E    L P K AYP 
Sbjct: 173 EEEKAKRLLYC--ALCKVAVNSLSQLEAHNKGTKHKTIL------EARSGLGPIK-AYPR 223

Query: 160 TGPDAPQRP 168
            GP  P  P
Sbjct: 224 LGPPTPGEP 232


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.137    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,245,147
Number of Sequences: 37866
Number of extensions: 227131
Number of successful extensions: 1076
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1050
Number of HSP's gapped (non-prelim): 27
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.