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Search of human proteins with 31559821
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo
sapiens]
(279 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens] 573 e-164
gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens] 180 1e-45
gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens] 180 1e-45
gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens] 180 1e-45
gi|239508957 PREDICTED: similar to hCG1770601 [Homo sapiens] 180 1e-45
gi|122939172 connexin 45 [Homo sapiens] 178 5e-45
gi|69122473 connexin 45 [Homo sapiens] 178 5e-45
gi|22779877 connexin 46 [Homo sapiens] 150 9e-37
gi|55953076 connexin 50 [Homo sapiens] 147 1e-35
gi|14211941 gap junction protein, alpha 10 [Homo sapiens] 143 1e-34
gi|62865885 connexin 37 [Homo sapiens] 141 7e-34
gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens] 140 1e-33
gi|4504001 connexin 43 [Homo sapiens] 136 2e-32
gi|32483412 connexin 40 [Homo sapiens] 135 3e-32
gi|6631083 connexin 40 [Homo sapiens] 135 3e-32
gi|42558283 gap junction protein beta 2 [Homo sapiens] 132 3e-31
gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 132 3e-31
gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens] 129 4e-30
gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens] 128 6e-30
gi|159032020 gap junction protein, beta 6 [Homo sapiens] 127 1e-29
gi|158966714 gap junction protein, beta 6 [Homo sapiens] 127 1e-29
gi|158966717 gap junction protein, beta 6 [Homo sapiens] 127 1e-29
gi|40254837 gap junction protein, beta 6 [Homo sapiens] 127 1e-29
gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens] 126 2e-29
gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens] 126 2e-29
gi|145699105 connexin40.1 [Homo sapiens] 122 3e-28
gi|54607056 connexin 31 [Homo sapiens] 118 7e-27
gi|13128960 connexin 31 [Homo sapiens] 118 7e-27
gi|23397464 gap junction protein, beta 4 [Homo sapiens] 116 2e-26
gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens] 111 8e-25
>gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]
Length = 279
Score = 573 bits (1478), Expect = e-164
Identities = 279/279 (100%), Positives = 279/279 (100%)
Query: 1 MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC 60
MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC
Sbjct: 1 MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC 60
Query: 61 KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGRE 120
KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGRE
Sbjct: 61 KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGRE 120
Query: 121 GNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITC 180
GNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITC
Sbjct: 121 GNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITC 180
Query: 181 NLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSESTRR 240
NLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSESTRR
Sbjct: 181 NLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSESTRR 240
Query: 241 HKKATDSLPVVETKEQFQEAVPGRSLAQEKQRPVGPRDA 279
HKKATDSLPVVETKEQFQEAVPGRSLAQEKQRPVGPRDA
Sbjct: 241 HKKATDSLPVVETKEQFQEAVPGRSLAQEKQRPVGPRDA 279
>gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 180 bits (456), Expect = 1e-45
Identities = 89/96 (92%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
Query: 1 MCGRFLRR-LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 59
MCGRFLR LLAEES STPVGRLL PVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG
Sbjct: 19 MCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 78
Query: 60 CKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFT 95
CKAACFDAFHPLSPLRFWVFQVILVAVPS LYMG+T
Sbjct: 79 CKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYT 114
>gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 180 bits (456), Expect = 1e-45
Identities = 89/96 (92%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
Query: 1 MCGRFLRR-LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 59
MCGRFLR LLAEES STPVGRLL PVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG
Sbjct: 19 MCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 78
Query: 60 CKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFT 95
CKAACFDAFHPLSPLRFWVFQVILVAVPS LYMG+T
Sbjct: 79 CKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYT 114
>gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 180 bits (456), Expect = 1e-45
Identities = 89/96 (92%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
Query: 1 MCGRFLRR-LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 59
MCGRFLR LLAEES STPVGRLL PVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG
Sbjct: 19 MCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 78
Query: 60 CKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFT 95
CKAACFDAFHPLSPLRFWVFQVILVAVPS LYMG+T
Sbjct: 79 CKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYT 114
>gi|239508957 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 180 bits (456), Expect = 1e-45
Identities = 89/96 (92%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
Query: 1 MCGRFLRR-LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 59
MCGRFLR LLAEES STPVGRLL PVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG
Sbjct: 19 MCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 78
Query: 60 CKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFT 95
CKAACFDAFHPLSPLRFWVFQVILVAVPS LYMG+T
Sbjct: 79 CKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYT 114
>gi|122939172 connexin 45 [Homo sapiens]
Length = 396
Score = 178 bits (451), Expect = 5e-45
Identities = 107/256 (41%), Positives = 139/256 (54%), Gaps = 40/256 (15%)
Query: 1 MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC 60
M FL RLL E ST VG++ L VL+ FR+VL A G +Y DEQS+FVC+T+QPGC
Sbjct: 1 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGC 60
Query: 61 KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHV--IWHWELSGKG--------- 109
+ C+DAF PLS +RFWVFQ+ILVA PS +Y+G+ ++ + + H E K
Sbjct: 61 ENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAMR 120
Query: 110 -KEEETLIQGREGNTDVP-------------------------GAGSLR---LLWAYVAQ 140
K+ L + E N + P G +R L+ YV Q
Sbjct: 121 WKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQ 180
Query: 141 LGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLKTMFGVSG 200
L AR V E L QY LYGFQ+ + C R PC I C +SRP+EKTIFL M+GV+G
Sbjct: 181 LLARTVFEVGFLIGQYFLYGFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVTG 240
Query: 201 FCLLFTFLELVLLGLG 216
CLL E++ LG G
Sbjct: 241 LCLLLNIWEMLHLGFG 256
>gi|69122473 connexin 45 [Homo sapiens]
Length = 396
Score = 178 bits (451), Expect = 5e-45
Identities = 107/256 (41%), Positives = 139/256 (54%), Gaps = 40/256 (15%)
Query: 1 MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC 60
M FL RLL E ST VG++ L VL+ FR+VL A G +Y DEQS+FVC+T+QPGC
Sbjct: 1 MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGC 60
Query: 61 KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHV--IWHWELSGKG--------- 109
+ C+DAF PLS +RFWVFQ+ILVA PS +Y+G+ ++ + + H E K
Sbjct: 61 ENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAMR 120
Query: 110 -KEEETLIQGREGNTDVP-------------------------GAGSLR---LLWAYVAQ 140
K+ L + E N + P G +R L+ YV Q
Sbjct: 121 WKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDGLMKIYVLQ 180
Query: 141 LGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLKTMFGVSG 200
L AR V E L QY LYGFQ+ + C R PC I C +SRP+EKTIFL M+GV+G
Sbjct: 181 LLARTVFEVGFLIGQYFLYGFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGVTG 240
Query: 201 FCLLFTFLELVLLGLG 216
CLL E++ LG G
Sbjct: 241 LCLLLNIWEMLHLGFG 256
>gi|22779877 connexin 46 [Homo sapiens]
Length = 435
Score = 150 bits (380), Expect = 9e-37
Identities = 89/236 (37%), Positives = 132/236 (55%), Gaps = 17/236 (7%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL RLL ST +G++ L VL FR+++L A+ V+GDEQS+F C+TQQPGC+ C
Sbjct: 6 FLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPGCENVC 65
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQ----GRE 120
+D P+S +RFW Q+I V+ P+ +Y+G L H++ E + +EEE L + +E
Sbjct: 66 YDRAFPISHIRFWALQIIFVSTPTLIYLGHVL-HIVRMEEKKKEREEEEQLKRESPSPKE 124
Query: 121 GNTDVPGA----GSLR----LLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRRE 172
D P + G +R LL YV + + + E + QY LYGF++ + C R
Sbjct: 125 PPQDNPSSRDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFELKPLYRCDRW 184
Query: 173 PCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSS 228
PC ++ C +SRP+EKTIF+ M V+ LL LE+ LG W+ K +S
Sbjct: 185 PCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLG----WKKLKQGVTS 236
>gi|55953076 connexin 50 [Homo sapiens]
Length = 433
Score = 147 bits (371), Expect = 1e-35
Identities = 84/227 (37%), Positives = 124/227 (54%), Gaps = 19/227 (8%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL +L E + ST +GR+ L VL FR+++L + V+GDEQS+FVC+TQQPGC+ C
Sbjct: 6 FLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPGCENVC 65
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGREGNTD 124
+D P+S +R WV Q+I V+ PS +Y+G +++V E K +E E L Q + G
Sbjct: 66 YDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYV--RMEEKRKSREAEELGQ-QAGTNG 122
Query: 125 VPGAGSLR----------------LLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFA 168
P GS++ LL Y+ + + + E + Y LYGF++ +
Sbjct: 123 GPDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRILPLYR 182
Query: 169 CRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGL 215
C R PC + C +SRP+EKTIF+ M V+ L +EL LGL
Sbjct: 183 CSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGL 229
>gi|14211941 gap junction protein, alpha 10 [Homo sapiens]
Length = 543
Score = 143 bits (361), Expect = 1e-34
Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 23/241 (9%)
Query: 9 LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 68
+L E ST VG++ L +L FR+++L + V+ DEQS F C+T+QPGC C+D
Sbjct: 10 ILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQPGCNNICYDDA 69
Query: 69 HPLSPLRFWVFQVILVAVPSALYMGFTLY--------------HVIWHWELSGKGKEEET 114
P+S +RFWV Q+I V+ PS +YMG LY H+ E EE+
Sbjct: 70 FPISLIRFWVLQIIFVSSPSLVYMGHALYRLRAFEKDRQRKKSHLRAQMENPDLDLEEQQ 129
Query: 115 LI-------QGREGNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSF 167
I + ++ VP G LL YV + R VLE + QY LYGFQM +
Sbjct: 130 RIDRELRRLEEQKRIHKVPLKGC--LLRTYVLHILTRSVLEVGFMIGQYILYGFQMHPLY 187
Query: 168 ACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSS 227
C + PC ++ C +SRP+EKTIF+ M ++ LL LE+ LG+ + RT KSS
Sbjct: 188 KCTQPPCPNAVDCFVSRPTEKTIFMLFMHSIAAISLLLNILEIFHLGIRKIMRTLYKKSS 247
Query: 228 S 228
S
Sbjct: 248 S 248
>gi|62865885 connexin 37 [Homo sapiens]
Length = 333
Score = 141 bits (355), Expect = 7e-34
Identities = 84/226 (37%), Positives = 119/226 (52%), Gaps = 17/226 (7%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL +LL + ST VG++ L VL FR+++L +G V+GDEQS+F C+T QPGC C
Sbjct: 6 FLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCTNVC 65
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETL--------- 115
+D P+S +R+WV Q + V+ P+ +Y+G +Y L K E L
Sbjct: 66 YDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKDPQVER 125
Query: 116 ----IQGREGNTDVPGAGSLR----LLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSF 167
++ + V G LR L+ YVA + + VLE L Q+ LYG+ M F
Sbjct: 126 ALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWTMEPVF 185
Query: 168 ACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
C+R PC + C +SRP+EKTIF+ M V L+ LELV L
Sbjct: 186 VCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHL 231
>gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens]
Length = 321
Score = 140 bits (353), Expect = 1e-33
Identities = 94/279 (33%), Positives = 133/279 (47%), Gaps = 65/279 (23%)
Query: 6 LRRLL-AEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
L RLL A + ST +GR+LL V++ FR++++A G VY DEQ+ FVC+T QPGC AC
Sbjct: 7 LERLLEAAVQQHSTMIGRILLTVVVIFRILIVAIVGETVYDDEQTMFVCNTLQPGCNQAC 66
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWEL------------------- 105
+D P+S +R+WVFQ+I+V PS ++ ++++ E
Sbjct: 67 YDRAFPISHIRYWVFQIIMVCTPSLCFITYSVHQSAKQRERRYSTVFLALDRDPPESIGG 126
Query: 106 --------SGKGKEEE-----TLIQGREGNTD----------------VPGAGSLR---- 132
SG GK E+ ++ G NT+ P LR
Sbjct: 127 PGGTGGGGSGGGKREDKKLQNAIVNGVLQNTENTSKETEPDCLEVKELTPHPSGLRTASK 186
Query: 133 --------LLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSR 184
+ Y+ Q+ R LE L QY LYGF +P + C R PC+ + C +SR
Sbjct: 187 SKLRRQEGISRFYIIQVVFRNALEIGFLVGQYFLYGFSVPGLYECNRYPCIKEVECYVSR 246
Query: 185 PSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWK 223
P+EKT+FL MF VSG C++ EL LG WR K
Sbjct: 247 PTEKTVFLVFMFAVSGICVVLNLAELNHLG----WRKIK 281
>gi|4504001 connexin 43 [Homo sapiens]
Length = 382
Score = 136 bits (343), Expect = 2e-32
Identities = 82/224 (36%), Positives = 121/224 (54%), Gaps = 21/224 (9%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L +LL + ST G++ L VL FR++LL + +GDEQS F C+TQQPGC+ C+
Sbjct: 7 LGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPGCENVCY 66
Query: 66 DAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGREG-NTD 124
D P+S +RFWV Q+I V+VP+ LY+ Y + E KEEE + +G N D
Sbjct: 67 DKSFPISHVRFWVLQIIFVSVPTLLYLAHVFY--VMRKEEKLNKKEEELKVAQTDGVNVD 124
Query: 125 V----------------PGAGSLR--LLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSS 166
+ G +R LL Y+ + + + E A L +Q+++YGF + +
Sbjct: 125 MHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIYGFSLSAV 184
Query: 167 FACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLEL 210
+ C+R+PC + C LSRP+EKTIF+ M VS L +EL
Sbjct: 185 YTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIEL 228
>gi|32483412 connexin 40 [Homo sapiens]
Length = 358
Score = 135 bits (341), Expect = 3e-32
Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL L E + ST VG++ L VL FR+++L + +GDEQ++F C T QPGC+ C
Sbjct: 6 FLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVC 65
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWH-----------WELSGKGKEEE 113
+D P+S +R+WV Q+I V+ PS +YMG ++ V E+ G G E
Sbjct: 66 YDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGSYEY 125
Query: 114 TLIQGREGNTDVPGAGSL----RLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFAC 169
+ + E + G G + LL YV + R +E + QY +YG + + C
Sbjct: 126 PVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLTTLHVC 185
Query: 170 RREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLG 214
RR PC + C +SRP+EK +F+ M V+ LL + EL LG
Sbjct: 186 RRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLG 230
>gi|6631083 connexin 40 [Homo sapiens]
Length = 358
Score = 135 bits (341), Expect = 3e-32
Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL L E + ST VG++ L VL FR+++L + +GDEQ++F C T QPGC+ C
Sbjct: 6 FLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVC 65
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWH-----------WELSGKGKEEE 113
+D P+S +R+WV Q+I V+ PS +YMG ++ V E+ G G E
Sbjct: 66 YDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGSYEY 125
Query: 114 TLIQGREGNTDVPGAGSL----RLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFAC 169
+ + E + G G + LL YV + R +E + QY +YG + + C
Sbjct: 126 PVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLTTLHVC 185
Query: 170 RREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLG 214
RR PC + C +SRP+EK +F+ M V+ LL + EL LG
Sbjct: 186 RRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLG 230
>gi|42558283 gap junction protein beta 2 [Homo sapiens]
Length = 226
Score = 132 bits (332), Expect = 3e-31
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 8/212 (3%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L+ +L ++ ST +G++ L VL FR+++L + V+GDEQ++FVC+T QPGCK C+
Sbjct: 6 LQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPSALYMGFTLY--HVIWHWELSGKGKEE-ETLIQGREGN 122
D + P+S +R W Q+I V+ P+ L Y H + G+ K E + + + +
Sbjct: 66 DHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIKGEIKSEFKDIEEIKTQK 125
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G+ L W Y + + R++ E A + + Y +Y GF M C PC ++ C
Sbjct: 126 VRIEGS----LWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCF 181
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
+SRP+EKT+F M VSG C+L EL L
Sbjct: 182 VSRPTEKTVFTVFMIAVSGICILLNVTELCYL 213
>gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens]
Length = 515
Score = 132 bits (332), Expect = 3e-31
Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 27/247 (10%)
Query: 10 LAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFH 69
L E ST +G++ L +L FR+++L + V+ DEQS F+C+T+QPGC+ C+D
Sbjct: 11 LEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPGCRNVCYDQAF 70
Query: 70 PLSPLRFWVFQVILVAVPSALYMGFTLYH---------------------VIWHWELSGK 108
P+S +R+WV QVI V+ PS +YMG LY V + +
Sbjct: 71 PISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEEVEFEMPRDRR 130
Query: 109 GKEEETLIQGREGNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFA 168
E+E + P G+L L YV + R V+E + QY LYGF + F
Sbjct: 131 RLEQELCQLEKRKLNKAPLRGTL--LCTYVIHIFTRSVVEVGFMIGQYLLYGFHLEPLFK 188
Query: 169 CRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGR----WWRTWKH 224
C PC I C +SRP+EKTIFL M ++ L LE+ LG + W +K
Sbjct: 189 CHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIKRGLWGKYKL 248
Query: 225 KSSSSKY 231
K +++
Sbjct: 249 KKEHNEF 255
>gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]
Length = 294
Score = 129 bits (323), Expect = 4e-30
Identities = 86/252 (34%), Positives = 127/252 (50%), Gaps = 25/252 (9%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL LL +S VGRL L V+L FR+++LA G V+ DEQ EFVC+T QPGC+ C
Sbjct: 6 FLGSLLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTC 65
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKE---EETLIQGREG 121
+D P+S RFW+F ++L++ P L++ ++++ GKE E Q G
Sbjct: 66 YDRAFPVSHYRFWLFHILLLSAPPVLFVVYSMHRA---------GKEAGGAEAAAQCAPG 116
Query: 122 NTDVPGA----GSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGS 177
+ A + R Y+ + RL+ E LG Q LYGF++ FAC PC +
Sbjct: 117 LPEAQCAPCALRARRARRCYLLSVALRLLAELTFLGGQALLYGFRVAPHFACAGPPCPHT 176
Query: 178 ITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKYFLTSES 237
+ C +SRP+EKT+F+ F V L + EL L WK + + + +
Sbjct: 177 VDCFVSRPTEKTVFVLFYFAVGLLSALLSVAELGHL-------LWKGRPRAGE--RDNRC 227
Query: 238 TRRHKKATDSLP 249
R H++A LP
Sbjct: 228 NRAHEEAQKLLP 239
>gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens]
Length = 223
Score = 128 bits (321), Expect = 6e-30
Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 14/216 (6%)
Query: 1 MCGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGC 60
M FLR LL+ ++ ST G + L V+ FRL++ + V+ DEQ EF C+++QPGC
Sbjct: 1 MSWMFLRDLLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGC 60
Query: 61 KAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGRE 120
K CFD F P+S +R W Q+I+V+ PS L + HV +H +G+E+ + R+
Sbjct: 61 KNVCFDDFFPISQVRLWALQLIMVSTPSLL----VVLHVAYH-----EGREK----RHRK 107
Query: 121 GNTDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSIT 179
PG L +AY+ L + E L L Y LY GF +P C +PC ++
Sbjct: 108 KLYVSPGTMDGGLWYAYLISLIVKTGFEIGFLVLFYKLYDGFSVPYLIKCDLKPCPNTVD 167
Query: 180 CNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGL 215
C +S+P+EKTIF+ + S C++ F+EL L L
Sbjct: 168 CFISKPTEKTIFILFLVITSCLCIVLNFIELSFLVL 203
>gi|159032020 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 127 bits (318), Expect = 1e-29
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L + ++ ST +G++ + V+ FR+++L + V+GDEQ +FVC+T QPGCK C+
Sbjct: 6 LHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
D F P+S +R W Q+I V+ P+ A+++ + + + K + + + ++
Sbjct: 66 DHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDIKKQK 125
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G+ L W Y + + R++ E A + + Y LY G+ +P C +PC + C
Sbjct: 126 VRIEGS----LWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCF 181
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKY 231
+SRP+EKT+F M S C+L EL L L +R K + +
Sbjct: 182 ISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNH 231
>gi|158966714 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 127 bits (318), Expect = 1e-29
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L + ++ ST +G++ + V+ FR+++L + V+GDEQ +FVC+T QPGCK C+
Sbjct: 6 LHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
D F P+S +R W Q+I V+ P+ A+++ + + + K + + + ++
Sbjct: 66 DHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDIKKQK 125
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G+ L W Y + + R++ E A + + Y LY G+ +P C +PC + C
Sbjct: 126 VRIEGS----LWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCF 181
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKY 231
+SRP+EKT+F M S C+L EL L L +R K + +
Sbjct: 182 ISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNH 231
>gi|158966717 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 127 bits (318), Expect = 1e-29
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L + ++ ST +G++ + V+ FR+++L + V+GDEQ +FVC+T QPGCK C+
Sbjct: 6 LHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
D F P+S +R W Q+I V+ P+ A+++ + + + K + + + ++
Sbjct: 66 DHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDIKKQK 125
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G+ L W Y + + R++ E A + + Y LY G+ +P C +PC + C
Sbjct: 126 VRIEGS----LWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCF 181
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKY 231
+SRP+EKT+F M S C+L EL L L +R K + +
Sbjct: 182 ISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNH 231
>gi|40254837 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 127 bits (318), Expect = 1e-29
Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 8/230 (3%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L + ++ ST +G++ + V+ FR+++L + V+GDEQ +FVC+T QPGCK C+
Sbjct: 6 LHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
D F P+S +R W Q+I V+ P+ A+++ + + + K + + + ++
Sbjct: 66 DHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHETTRKFRRGEKRNDFKDIEDIKKQK 125
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G+ L W Y + + R++ E A + + Y LY G+ +P C +PC + C
Sbjct: 126 VRIEGS----LWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCF 181
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRTWKHKSSSSKY 231
+SRP+EKT+F M S C+L EL L L +R K + +
Sbjct: 182 ISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRSKRAQTQKNH 231
>gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 126 bits (317), Expect = 2e-29
Identities = 73/212 (34%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L LL+ +R ST +GR+ L V+ FR+++L + V+GDE+S F+C+T QPGC + C+
Sbjct: 6 LYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNSVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
D F P+S +R W Q+ILV+ P+ A+++ + L G G + L + +
Sbjct: 66 DQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHG-DPLHLEEVKRHK 124
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G L W YV + RL+ E + + Y LY G+ M C PC ++ C
Sbjct: 125 VHISGT----LWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF 180
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
+SRP+EKT+F M SG C++ E+V L
Sbjct: 181 VSRPTEKTVFTVFMLAASGICIILNVAEVVYL 212
>gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 126 bits (317), Expect = 2e-29
Identities = 73/212 (34%), Positives = 114/212 (53%), Gaps = 9/212 (4%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L LL+ +R ST +GR+ L V+ FR+++L + V+GDE+S F+C+T QPGC + C+
Sbjct: 6 LYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNSVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPS---ALYMGFTLYHVIWHWELSGKGKEEETLIQGREGN 122
D F P+S +R W Q+ILV+ P+ A+++ + L G G + L + +
Sbjct: 66 DQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIEKKMLRLEGHG-DPLHLEEVKRHK 124
Query: 123 TDVPGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
+ G L W YV + RL+ E + + Y LY G+ M C PC ++ C
Sbjct: 125 VHISGT----LWWTYVISVVFRLLFEAVFMYVFYLLYPGYAMVRLVKCDVYPCPNTVDCF 180
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
+SRP+EKT+F M SG C++ E+V L
Sbjct: 181 VSRPTEKTVFTVFMLAASGICIILNVAEVVYL 212
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 122 bits (306), Expect = 3e-28
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 18 TPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFW 77
T VG+L + + R++++ +G VY DEQ FVC+T QPGC C+D F P+S LRFW
Sbjct: 19 TMVGKLWFVLTMLLRMLVIVLAGRPVYQDEQERFVCNTLQPGCANVCYDVFSPVSHLRFW 78
Query: 78 VFQVILVAVPSALYMGFTLYHVIWHWELS----------GKGKEEETLIQGREGNTDVPG 127
+ Q + V +PSA++ + L+ L G+ G G VP
Sbjct: 79 LIQGVCVLLPSAVFSVYVLHRGATLAALGPRRCPDPREPASGQRRCPRPFGERGGLQVPD 138
Query: 128 AGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSE 187
+ Y+ L R +LE A L Y L+GF P F C R PC G + C +SRP+E
Sbjct: 139 FSA-----GYIIHLLLRTLLEAAFGALHYFLFGFLAPKKFPCTRPPCTGVVDCYVSRPTE 193
Query: 188 KTIFLKTMFGVSGFCLLFTFLELV 211
K++ + ++ VS L +LV
Sbjct: 194 KSLLMLFLWAVSALSFLLGLADLV 217
>gi|54607056 connexin 31 [Homo sapiens]
Length = 270
Score = 118 bits (295), Expect = 7e-27
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 12/212 (5%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L+ LL+ ++ ST GR+ L V+ FR+++ + V+GDEQ +F C+T+QPGC C+
Sbjct: 6 LQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGREGNTDV 125
D + P+S +R W Q+I V PS L + HV + E + +++ G +
Sbjct: 66 DNYFPISNIRLWALQLIFVTCPSLL----VILHVAYREERERRHRQK----HGDQCAKLY 117
Query: 126 PGAGSLR--LLWAYVAQLGARLVLEGAALGLQYHL-YGFQMPSSFACRR-EPCLGSITCN 181
AG L W Y+ L +L++E L L + L +GF MP C PC + C
Sbjct: 118 DNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCY 177
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
++RP+EK IF M G S C++ T EL L
Sbjct: 178 IARPTEKKIFTYFMVGASAVCIVLTICELCYL 209
>gi|13128960 connexin 31 [Homo sapiens]
Length = 270
Score = 118 bits (295), Expect = 7e-27
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 12/212 (5%)
Query: 6 LRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACF 65
L+ LL+ ++ ST GR+ L V+ FR+++ + V+GDEQ +F C+T+QPGC C+
Sbjct: 6 LQALLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCY 65
Query: 66 DAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGREGNTDV 125
D + P+S +R W Q+I V PS L + HV + E + +++ G +
Sbjct: 66 DNYFPISNIRLWALQLIFVTCPSLL----VILHVAYREERERRHRQK----HGDQCAKLY 117
Query: 126 PGAGSLR--LLWAYVAQLGARLVLEGAALGLQYHL-YGFQMPSSFACRR-EPCLGSITCN 181
AG L W Y+ L +L++E L L + L +GF MP C PC + C
Sbjct: 118 DNAGKKHGGLWWTYLFSLIFKLIIEFLFLYLLHTLWHGFNMPRLVQCANVAPCPNIVDCY 177
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
++RP+EK IF M G S C++ T EL L
Sbjct: 178 IARPTEKKIFTYFMVGASAVCIVLTICELCYL 209
>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
Length = 266
Score = 116 bits (291), Expect = 2e-26
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 5 FLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAAC 64
FL+ LL+ ++ ST + R+ L V+ FR+++ + V+ DEQ +FVC+T+QPGC C
Sbjct: 5 FLQGLLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGCPNVC 64
Query: 65 FDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWELSGKGKEEETLIQGREGNTD 124
+D F P+S +R W Q+ILV PS L V+ H + + + L G +
Sbjct: 65 YDEFFPVSHVRLWALQLILVTCPSLL--------VVMHVAYREERERKHHLKHGPNAPSL 116
Query: 125 VPGAGSLR--LLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCN 181
R L W Y+ L + ++ L + + LY + MP AC EPC ++ C
Sbjct: 117 YDNLSKKRGGLWWTYLLSLIFKAAVDAGFLYIFHRLYKDYDMPRVVACSVEPCPHTVDCY 176
Query: 182 LSRPSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
+SRP+EK +F M + C+L E+ L
Sbjct: 177 ISRPTEKKVFTYFMVTTAAICILLNLSEVFYL 208
>gi|10835079 gap junction protein, beta 5, 31.1kDa [Homo sapiens]
Length = 273
Score = 111 bits (277), Expect = 8e-25
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 9 LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 68
LL+ ++ ST GR+ L ++ FR+++ + V+ D+ +F C+T+QPGC CFD F
Sbjct: 9 LLSGVNKYSTAFGRIWLSLVFIFRVLVYLVTAERVWSDDHKDFDCNTRQPGCSNVCFDEF 68
Query: 69 HPLSPLRFWVFQVILVAVPSALYMGFTLYHVIW---HWELSGKGKEEETLIQGREGNTDV 125
P+S +R W Q+ILV PS L + Y + H E G+ L G++
Sbjct: 69 FPVSHVRLWALQLILVTCPSLLVVMHVAYREVQEKRHREAHGENSGRLYLNPGKKRG--- 125
Query: 126 PGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLY-GFQMPSSFACRREPCLGSITCNLSR 184
L W YV L + ++ A L + + Y + +P C +PC + C +S+
Sbjct: 126 ------GLWWTYVCSLVFKASVDIAFLYVFHSFYPKYILPPVVKCHADPCPNIVDCFISK 179
Query: 185 PSEKTIFLKTMFGVSGFCLLFTFLELVLL 213
PSEK IF M + C+L +EL+ L
Sbjct: 180 PSEKNIFTLFMVATAAICILLNLVELIYL 208
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,496,623
Number of Sequences: 37866
Number of extensions: 521718
Number of successful extensions: 1505
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1434
Number of HSP's gapped (non-prelim): 45
length of query: 279
length of database: 18,247,518
effective HSP length: 101
effective length of query: 178
effective length of database: 14,423,052
effective search space: 2567303256
effective search space used: 2567303256
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.