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Search of human proteins with 31543169
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo
sapiens]
(462 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo sapiens] 974 0.0
gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2 [... 341 9e-94
gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1 [... 341 9e-94
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 44 2e-04
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 44 2e-04
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform... 44 2e-04
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor... 44 2e-04
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 42 0.002
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 42 0.002
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 41 0.002
gi|18496983 CAP-GLY domain containing linker protein 3 [Homo sap... 41 0.002
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.004
gi|188035871 SET and MYND domain containing 2 [Homo sapiens] 40 0.004
gi|12232401 SET and MYND domain containing 3 [Homo sapiens] 39 0.013
gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens] 38 0.022
gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens] 38 0.022
gi|68563515 keratinocyte proline-rich protein [Homo sapiens] 37 0.029
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 37 0.038
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.049
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 37 0.049
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 37 0.049
gi|38093643 SET and MYND domain containing 1 [Homo sapiens] 37 0.049
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.064
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.064
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 36 0.064
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 36 0.064
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 36 0.064
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 36 0.064
gi|157278361 nuclear localized factor 2 [Homo sapiens] 36 0.064
gi|147903292 nuclear localized factor 1 [Homo sapiens] 36 0.064
>gi|31543169 suppressor of variegation 4-20 homolog 2 [Homo sapiens]
Length = 462
Score = 974 bits (2517), Expect = 0.0
Identities = 462/462 (100%), Positives = 462/462 (100%)
Query: 1 MGPDRVTARELCENDDLATSLVLDPYLGFRTHKMNVSPVPPLRRQQHLRSALETFLRQRD 60
MGPDRVTARELCENDDLATSLVLDPYLGFRTHKMNVSPVPPLRRQQHLRSALETFLRQRD
Sbjct: 1 MGPDRVTARELCENDDLATSLVLDPYLGFRTHKMNVSPVPPLRRQQHLRSALETFLRQRD 60
Query: 61 LEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTILPCTRYSMETNG 120
LEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTILPCTRYSMETNG
Sbjct: 61 LEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLPESGFTILPCTRYSMETNG 120
Query: 121 AKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYSTRKRSAQLWLGPAAF 180
AKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYSTRKRSAQLWLGPAAF
Sbjct: 121 AKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYSTRKRSAQLWLGPAAF 180
Query: 181 INHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGEG 240
INHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGEG
Sbjct: 181 INHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGEG 240
Query: 241 AFRTRPREPALPPRPLDKYQLRETKRRLQQGLDSGSRQGLLGPRACVHPSPLRRDPFCAA 300
AFRTRPREPALPPRPLDKYQLRETKRRLQQGLDSGSRQGLLGPRACVHPSPLRRDPFCAA
Sbjct: 241 AFRTRPREPALPPRPLDKYQLRETKRRLQQGLDSGSRQGLLGPRACVHPSPLRRDPFCAA 300
Query: 301 CQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPRRAPVLSTHHAARVSLHRWG 360
CQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPRRAPVLSTHHAARVSLHRWG
Sbjct: 301 CQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPRRAPVLSTHHAARVSLHRWG 360
Query: 361 GCGPHCRLRGEALVALGQPPHARWAPQQDWHWARRYGLPYVVRVDLRRLAPAPPATPAPA 420
GCGPHCRLRGEALVALGQPPHARWAPQQDWHWARRYGLPYVVRVDLRRLAPAPPATPAPA
Sbjct: 361 GCGPHCRLRGEALVALGQPPHARWAPQQDWHWARRYGLPYVVRVDLRRLAPAPPATPAPA 420
Query: 421 GTPGPILIPKQALAFAPFSPPKRLRLVVSHGSIDLDVGGEEL 462
GTPGPILIPKQALAFAPFSPPKRLRLVVSHGSIDLDVGGEEL
Sbjct: 421 GTPGPILIPKQALAFAPFSPPKRLRLVVSHGSIDLDVGGEEL 462
>gi|50659084 suppressor of variegation 4-20 homolog 1 isoform 2
[Homo sapiens]
Length = 393
Score = 341 bits (874), Expect = 9e-94
Identities = 168/289 (58%), Positives = 203/289 (70%), Gaps = 24/289 (8%)
Query: 6 VTARELCENDDLATSLVLDPYLGFRTHKMNVSPVP-----------------PLR----- 43
++A+ELCENDDLATSLVLDPYLGF+THKMN S P P+R
Sbjct: 72 MSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNPVRFRPIK 131
Query: 44 -RQQHLRSALETFLRQRDLEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLP 102
RQ+ L+ +E F + LE A++ LT G W YF ++ QE K HV+ YLR F
Sbjct: 132 GRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFAT 191
Query: 103 ESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEG-LLRAGENDFS 161
+SGF ILPC RYS E NGAKIV+T+ WK+N+K+ELLVGCIAEL E +E LLR GENDFS
Sbjct: 192 DSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFS 251
Query: 162 IMYSTRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGF 221
+MYSTRK AQLWLGPAAFINHDC+PNCKFV + ACVK LRDIEPG+E++C+YG+GF
Sbjct: 252 VMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGF 311
Query: 222 FGEKNEHCECHTCERKGEGAFRTRPREPALPPRPLDKYQLRETKRRLQQ 270
FGE NE CEC+TCER+G GAF++R PA P KY LRET +RL +
Sbjct: 312 FGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
>gi|50659082 suppressor of variegation 4-20 homolog 1 isoform 1
[Homo sapiens]
Length = 885
Score = 341 bits (874), Expect = 9e-94
Identities = 168/289 (58%), Positives = 203/289 (70%), Gaps = 24/289 (8%)
Query: 6 VTARELCENDDLATSLVLDPYLGFRTHKMNVSPVP-----------------PLR----- 43
++A+ELCENDDLATSLVLDPYLGF+THKMN S P P+R
Sbjct: 72 MSAKELCENDDLATSLVLDPYLGFQTHKMNTSAFPSRSSRHFSKSDSFSHNNPVRFRPIK 131
Query: 44 -RQQHLRSALETFLRQRDLEAAYRALTLGGWTARYFQSRGPRQEAALKTHVYRYLRAFLP 102
RQ+ L+ +E F + LE A++ LT G W YF ++ QE K HV+ YLR F
Sbjct: 132 GRQEELKEVIERFKKDEHLEKAFKCLTSGEWARHYFLNKNKMQEKLFKEHVFIYLRMFAT 191
Query: 103 ESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEG-LLRAGENDFS 161
+SGF ILPC RYS E NGAKIV+T+ WK+N+K+ELLVGCIAEL E +E LLR GENDFS
Sbjct: 192 DSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFS 251
Query: 162 IMYSTRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGF 221
+MYSTRK AQLWLGPAAFINHDC+PNCKFV + ACVK LRDIEPG+E++C+YG+GF
Sbjct: 252 VMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGF 311
Query: 222 FGEKNEHCECHTCERKGEGAFRTRPREPALPPRPLDKYQLRETKRRLQQ 270
FGE NE CEC+TCER+G GAF++R PA P KY LRET +RL +
Sbjct: 312 FGENNEFCECYTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNR 360
Score = 31.6 bits (70), Expect = 1.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 435 FAPFSPPKRLRLVVSHGSIDLDV 457
F P P KRLRL+V SID+D+
Sbjct: 849 FIPLPPAKRLRLIVGKDSIDIDI 871
>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 44.3 bits (103), Expect = 2e-04
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 120 GAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWLGP- 177
G +V+ R +K E + VG + + E + A END + Y T + + GP
Sbjct: 1074 GWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTIDKDRIIDAGPK 1133
Query: 178 ---AAFINHDCKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCEC 231
+ F+NH C+PNC K+ + + DI G E+T Y G + C C
Sbjct: 1134 GNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRC 1193
Query: 232 HTCERKGEGAFRTRPR-EPALPPRPLDKYQLRETKRRLQQGLDSGSRQ 278
G RP+ L K ++T+RR +G G RQ
Sbjct: 1194 GA--SNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKG--EGKRQ 1237
>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 44.3 bits (103), Expect = 2e-04
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 120 GAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWLGP- 177
G +V+ R +K E + VG + + E + A END + Y T + + GP
Sbjct: 1074 GWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTIDKDRIIDAGPK 1133
Query: 178 ---AAFINHDCKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCEC 231
+ F+NH C+PNC K+ + + DI G E+T Y G + C C
Sbjct: 1134 GNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRC 1193
Query: 232 HTCERKGEGAFRTRPR-EPALPPRPLDKYQLRETKRRLQQGLDSGSRQ 278
G RP+ L K ++T+RR +G G RQ
Sbjct: 1194 GA--SNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKG--EGKRQ 1237
>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 44.3 bits (103), Expect = 2e-04
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 120 GAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWLGP- 177
G +V+ R +K E + VG + + E + A END + Y T + + GP
Sbjct: 1074 GWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTIDKDRIIDAGPK 1133
Query: 178 ---AAFINHDCKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCEC 231
+ F+NH C+PNC K+ + + DI G E+T Y G + C C
Sbjct: 1134 GNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRC 1193
Query: 232 HTCERKGEGAFRTRPR-EPALPPRPLDKYQLRETKRRLQQGLDSGSRQ 278
G RP+ L K ++T+RR +G G RQ
Sbjct: 1194 GA--SNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKG--EGKRQ 1237
>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
[Homo sapiens]
Length = 1365
Score = 44.3 bits (103), Expect = 2e-04
Identities = 45/168 (26%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 120 GAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWLGP- 177
G +V+ R +K E + VG + + E + A END + Y T + + GP
Sbjct: 1074 GWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTIDKDRIIDAGPK 1133
Query: 178 ---AAFINHDCKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCEC 231
+ F+NH C+PNC K+ + + DI G E+T Y G + C C
Sbjct: 1134 GNYSRFMNHSCQPNCETLKWTVNGDTRVGLFAVCDIPAGTELTFNYNLDCLGNEKTVCRC 1193
Query: 232 HTCERKGEGAFRTRPR-EPALPPRPLDKYQLRETKRRLQQGLDSGSRQ 278
G RP+ L K ++T+RR +G G RQ
Sbjct: 1194 GA--SNCSGFLGDRPKTSTTLSSEEKGKKTKKKTRRRRAKG--EGKRQ 1237
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 41.6 bits (96), Expect = 0.002
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Query: 130 KKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWLGP----AAFINHD 184
KK E + VG + + E + A E+D + Y T + + GP A F+NH
Sbjct: 1694 KKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHC 1753
Query: 185 CKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGEGA 241
C+PNC K+ + L DI+ G E+T Y G C+C G
Sbjct: 1754 CQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 1813
Query: 242 FRTRPREPALPPRPLDKYQLRETKRRLQQG 271
R + +P K++ ++ +R QG
Sbjct: 1814 VRPK-NQPIATEEKSKKFKKKQQGKRRTQG 1842
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 41.6 bits (96), Expect = 0.002
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Query: 130 KKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWLGP----AAFINHD 184
KK E + VG + + E + A E+D + Y T + + GP A F+NH
Sbjct: 1963 KKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHC 2022
Query: 185 CKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGEGA 241
C+PNC K+ + L DI+ G E+T Y G C+C G
Sbjct: 2023 CQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 2082
Query: 242 FRTRPREPALPPRPLDKYQLRETKRRLQQG 271
R + +P K++ ++ +R QG
Sbjct: 2083 VRPK-NQPIATEEKSKKFKKKQQGKRRTQG 2111
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 41.2 bits (95), Expect = 0.002
Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 10/139 (7%)
Query: 117 ETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYS-TRKRSAQLWL 175
E G + + R+ KK E + VG + + E + RA EN + Y T + +
Sbjct: 1153 ERRGWGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNFYMLTVTKDRIIDA 1212
Query: 176 GP----AAFINHDCKPNC---KFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEH 228
GP + F+NH C PNC K+ + L DI G E+T Y G N
Sbjct: 1213 GPKGNYSRFMNHSCNPNCETQKWTVNGDVRVGLFALCDIPAGMELTFNYNLDCLG--NGR 1270
Query: 229 CECHTCERKGEGAFRTRPR 247
ECH G RP+
Sbjct: 1271 TECHCGADNCSGFLGVRPK 1289
>gi|18496983 CAP-GLY domain containing linker protein 3 [Homo
sapiens]
Length = 547
Score = 41.2 bits (95), Expect = 0.002
Identities = 47/189 (24%), Positives = 75/189 (39%), Gaps = 25/189 (13%)
Query: 243 RTRPREPALPPRPLDKYQLRETKRRLQQGLDSGSRQGLLGPRACVHPS---PLRRD---- 295
+T P A PPR ++ + E + + + R+ + VHPS PL +D
Sbjct: 3 KTDPAPMAPPPRGEEEEEEEEDEPVPEAPSPTQERR----QKPVVHPSAPAPLPKDYAFT 58
Query: 296 ---PFCAACQPLRLPACSARPDTSPLWLQWLPQPQPRV--------RPRKRRRPRPRRAP 344
P ACQ + + P+ + QW+PQ Q ++ R R
Sbjct: 59 FFDPNDPACQEILFDPQTTIPELFAIVRQWVPQVQHKIDVIGNEILRRGCHVNDRDGLTD 118
Query: 345 VLSTHHAARVSLHRWGGCGPHCRLRGEALVALGQPP--HARWAPQQDWHWARRYGLPYVV 402
+ H+A + H G RL + L+ALG +RW H+A + +P +V
Sbjct: 119 MTLLHYACKAGAHGVGDPAAAVRL-SQQLLALGADVTLRSRWTNMNALHYAAYFDVPDLV 177
Query: 403 RVDLRRLAP 411
RV L+ P
Sbjct: 178 RVLLKGARP 186
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.0 bits (92), Expect = 0.004
Identities = 51/175 (29%), Positives = 67/175 (38%), Gaps = 35/175 (20%)
Query: 280 LLGPRACVHPSPLRRDPFC-AACQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRP 338
L P V PSP P +A P R+P A P LQ P P + +P
Sbjct: 730 LAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP-----LQVPPSPPASLPMSPLAKP 784
Query: 339 RPRRAPVLSTHHAARVSLHRWGGCGPHCRLRGEA----LVALGQPPHARWAPQQDWHWAR 394
P+ P L+T + P G+A +L P A PQ
Sbjct: 785 PPQAPPALATPPLQALP-------SPPASFPGQAPFSPSASLPMSPLATPPPQA------ 831
Query: 395 RYGLPYVVRVDLRRLAPAPPATP---AP--AGTPGP---ILIPKQALAFAPFSPP 441
P V+ L ++ P+PPA+P AP TPGP + P+ LA AP PP
Sbjct: 832 ----PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 882
Score = 30.4 bits (67), Expect = 3.5
Identities = 46/149 (30%), Positives = 59/149 (39%), Gaps = 31/149 (20%)
Query: 323 LPQPQPRVRPRKRRRPRPRRAPVLSTHH-------AARVSLHRWGGCG-PHCRLRGEALV 374
LP+P P RPR PR++ ++ H AAR GG P R +
Sbjct: 189 LPRPAPSARPRPPTEG-PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 247
Query: 375 ALGQP----PHARWAPQQDWHWA--RRYGL----PYVVRVDLRRLAPA-------PPATP 417
L P P AR P+ H + + GL P V + APA P ATP
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 307
Query: 418 APAGTPG-PILIPKQAL----AFAPFSPP 441
+P+GT P+ P A A P SPP
Sbjct: 308 SPSGTKARPVPPPDNAATPLPATLPPSPP 336
>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
Length = 433
Score = 40.0 bits (92), Expect = 0.004
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 179 AFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEH---------- 228
A +NH C PN V G A V+ +++I+PG+EV Y + + ++ +
Sbjct: 203 ALMNHSCCPNV-IVTYKGTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDRLRDSYFFT 261
Query: 229 CECHTCERKGEGAFRTRPREPALPPR 254
CEC C K + + R+ + PP+
Sbjct: 262 CECQECTTKDKDKAKVEIRKLSDPPK 287
>gi|12232401 SET and MYND domain containing 3 [Homo sapiens]
Length = 369
Score = 38.5 bits (88), Expect = 0.013
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 179 AFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNE----------H 228
+ +NH C PNC V +G ++ +RDIE G+E+T Y + +
Sbjct: 143 SLLNHSCDPNCSIV-FNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFE 201
Query: 229 CECHTCERKGEGA 241
C+C C+ + + A
Sbjct: 202 CDCFRCQTQDKDA 214
>gi|148839376 PWWP domain containing 2 isoform 1 [Homo sapiens]
Length = 590
Score = 37.7 bits (86), Expect = 0.022
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 289 PSPLRRDPFCAACQPLRLPACSARPDTSPLWLQ-----WLPQPQPRVRPRKRRRPRPRRA 343
P P P A P P P PLWL+ W+PQP PR R RRR R
Sbjct: 101 PPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRD 160
Query: 344 P---VLST 348
P +LST
Sbjct: 161 PGRLILST 168
>gi|148839311 PWWP domain containing 2 isoform 2 [Homo sapiens]
Length = 499
Score = 37.7 bits (86), Expect = 0.022
Identities = 26/68 (38%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 289 PSPLRRDPFCAACQPLRLPACSARPDTSPLWLQ-----WLPQPQPRVRPRKRRRPRPRRA 343
P P P A P P P PLWL+ W+PQP PR R RRR R
Sbjct: 101 PPPPLVPPLPAGSLPPYPPYFEGAPFPHPLWLRDTYKLWVPQPPPRTIKRTRRRLSRNRD 160
Query: 344 P---VLST 348
P +LST
Sbjct: 161 PGRLILST 168
>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
Length = 579
Score = 37.4 bits (85), Expect = 0.029
Identities = 45/173 (26%), Positives = 59/173 (34%), Gaps = 24/173 (13%)
Query: 283 PRACVHPSPLRRDPFC-----AACQPLRLPACSARPDTSPLWLQWL---PQPQ-----PR 329
PR + RR P C + C P ++P + P+ + PQP P
Sbjct: 310 PRRPISSCSQRRGPKCRIEISSPCCPRQVPPQRCPVEIPPIRRRSQSCGPQPSWGASCPE 369
Query: 330 VRPRKRRRPRPRRAPVLSTHHAARVSLHRWGGCGPHCRLRGEALVALGQPPHARWAPQQD 389
+RP RP P P L R P RLR E ++L P R P
Sbjct: 370 LRPHVEPRPLPSFCPPRRLDQCPESPLQRCPPPAPRPRLRPEPCISL--EPRPRPLP--- 424
Query: 390 WHWARRYGLPYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPPK 442
R+ P + L L P P P P PG IP+ P P+
Sbjct: 425 ----RQLSEPCLYPEPLPALRPTP--RPVPLPRPGQCEIPEPRPCLQPCEHPE 471
Score = 32.7 bits (73), Expect = 0.71
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 249 PALPPRPLDKYQLRETKRRLQQGLDSGSRQ-------GLLGPRACV----HPSPLRRDPF 297
P + PRPL + RRL Q +S ++ L P C+ P PL R
Sbjct: 372 PHVEPRPLPSFC---PPRRLDQCPESPLQRCPPPAPRPRLRPEPCISLEPRPRPLPRQLS 428
Query: 298 CAACQPLRLPACSARPDTSPLWLQW---LPQPQPRVRPRKRRRPRPRRAPV 345
P LPA P PL +P+P+P ++P + P PR P+
Sbjct: 429 EPCLYPEPLPALRPTPRPVPLPRPGQCEIPEPRPCLQPCEHPEPCPRPEPI 479
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 37.0 bits (84), Expect = 0.038
Identities = 62/237 (26%), Positives = 85/237 (35%), Gaps = 58/237 (24%)
Query: 246 PREPALPPRPLDKYQLRETKRRLQQGLDSGSRQGLLGPRACVHPSPLRRDPFCAACQPLR 305
P +P P K+Q R + + QG + QG+ G +P P
Sbjct: 1108 PGRGPVPAPPAAKWQDRPMQPLVSQGQLRHTSQGM-GIPVLPYPEPAE------------ 1154
Query: 306 LPACSARPDTSPLWLQWL-PQPQPRVRPRKRRRPRP----------RRAPVLSTHHAARV 354
P P T L +W PQP+PR PR+ RR P R +P+ + ++R
Sbjct: 1155 -PGAHGGPSTFGLDTRWYEPQPRPRPSPRQARRAEPSLHQVVLQPSRLSPLTQSPLSSRT 1213
Query: 355 ---SLHRWGGCGPHCRLRGEALVALGQPPHA----------RWAPQQDWHWARRYGLP-Y 400
L P + E QPP A +P Q + R G P Y
Sbjct: 1214 GSPELAARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQ----SSRSGSPSY 1269
Query: 401 VVRVDLRRLA---PAPPATPAPAG----------TPGPILIPKQALAFAPFSPPKRL 444
+ LA P+PP PAPAG TP P ++ L P +PP L
Sbjct: 1270 RPAMGFTTLATGYPSPPPGPAPAGPGDSLDVFGQTPSPRRTGEELL--RPETPPPTL 1324
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 36.6 bits (83), Expect = 0.049
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 290 SPLRRDPFCAACQPLRLPACSARPDTSPLWLQWLPQPQP----RVRPRKRRRPRPRRAPV 345
+P + P A PL++P + P + P+ P PQ P + +P P+ P
Sbjct: 465 TPPSQAPPSLAAPPLQVPP--SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 522
Query: 346 LSTHHAARVSLHRWGGCGPHCRLRGEA----LVALGQPPHARWAPQQDWHWARRYGLPYV 401
L+T + P G+A +L P A PQ P V
Sbjct: 523 LATPPLQALP-------SPPASFPGQAPFSPSASLPMSPLATPPPQA----------PPV 565
Query: 402 VRVDLRRLAPAPPATP---AP--AGTPGP---ILIPKQALAFAPFSPP 441
+ L ++ P+PPA+P AP TPGP + P+ LA AP PP
Sbjct: 566 LAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 613
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.049
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 290 SPLRRDPFCAACQPLRLPACSARPDTSPLWLQWLPQPQP----RVRPRKRRRPRPRRAPV 345
+P + P A PL++P + P + P+ P PQ P + +P P+ P
Sbjct: 426 TPPSQAPPSLAAPPLQVPP--SPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 483
Query: 346 LSTHHAARVSLHRWGGCGPHCRLRGEA----LVALGQPPHARWAPQQDWHWARRYGLPYV 401
L+T + P G+A +L P A PQ P V
Sbjct: 484 LATPPLQALP-------SPPASFPGQAPFSPSASLPMSPLATPPPQA----------PPV 526
Query: 402 VRVDLRRLAPAPPATP---AP--AGTPGP---ILIPKQALAFAPFSPP 441
+ L ++ P+PPA+P AP TPGP + P+ LA AP PP
Sbjct: 527 LAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Score = 34.3 bits (77), Expect = 0.24
Identities = 44/147 (29%), Positives = 58/147 (39%), Gaps = 27/147 (18%)
Query: 323 LPQPQPRVRPRKRRRPRPRRAPVLSTHH-------AARVSLHRWGGCG-PHCRLRGEALV 374
LP+P P RPR PR++ ++ H AAR GG P R +
Sbjct: 180 LPRPAPSARPRPPTEG-PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSAT 238
Query: 375 ALGQP----PHARWAPQQDWHWA--RRYGL----PYVVRVDLRRLAPA-------PPATP 417
L P P AR P+ H + + GL P V + APA P ATP
Sbjct: 239 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP 298
Query: 418 APAGTPGPILIPK-QALAFAPFSPPKR 443
+P+ P P P Q L P +PP +
Sbjct: 299 SPSAPPSPSAPPSLQTLPSPPATPPSQ 325
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 36.6 bits (83), Expect = 0.049
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 178 AAFINHDCKPNCKFVPADGNAAC---VKVLRDIEPGDEVTCFYG-EGFFGEKNEHCEC 231
A FINH C PNC+ N + L+D+ G E+T Y F EK + C+C
Sbjct: 2213 ARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKC 2270
>gi|38093643 SET and MYND domain containing 1 [Homo sapiens]
Length = 490
Score = 36.6 bits (83), Expect = 0.049
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 25/123 (20%)
Query: 181 INHDCKPNCKFVPADGNAACVK------------VLRDIEPGDEVTCFYGEGFFGEKNEH 228
+NHDC PNC + +GN VK L I G+E+T Y + F E
Sbjct: 204 VNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYID-FLNVSEER 262
Query: 229 -----------CECHTCERKGEGAFRTRPREPALPPRPLDKYQLRETKRRLQQGLDSGSR 277
C C C++K + ++ P + + K ++ +K L++ +D
Sbjct: 263 KRQLKKQYYFDCTCEHCQKKLKDDLFLGVKDNPKPSQEVVKEMIQFSKDTLEK-IDKARS 321
Query: 278 QGL 280
+GL
Sbjct: 322 EGL 324
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.064
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 399 PYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
P V + LAPAP PAPA P P+ P A A AP P
Sbjct: 157 PVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 199
Score = 30.4 bits (67), Expect = 3.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 410 APAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
APAP PAP P P P A A AP P
Sbjct: 174 APAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.064
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 399 PYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
P V + LAPAP PAPA P P+ P A A AP P
Sbjct: 157 PVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 199
Score = 30.4 bits (67), Expect = 3.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 410 APAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
APAP PAP P P P A A AP P
Sbjct: 174 APAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 36.2 bits (82), Expect = 0.064
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 399 PYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
P V + LAPAP PAPA P P+ P A A AP P
Sbjct: 168 PVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAP 210
Score = 30.4 bits (67), Expect = 3.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 410 APAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
APAP PAP P P P A A AP P
Sbjct: 185 APAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 36.2 bits (82), Expect = 0.064
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 171 AQLWLGPAAFINHDCKPNC--KFVPADGNAACVKV-LRDIEPGDEVTCFYGEGFFGEKNE 227
A L GPA +INH C PNC + V D + + R I G+E+T Y F ++++
Sbjct: 5463 ATLTGGPARYINHSCAPNCVAEVVTFDKEDKIIIISSRRIPKGEELTYDYQFDFEDDQHK 5522
Query: 228 ---HCECHTCER 236
HC C +
Sbjct: 5523 IPCHCGAWNCRK 5534
Score = 31.6 bits (70), Expect = 1.6
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 289 PSPLRRDPFCAACQPL-RLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPRRAPVLS 347
PSPL P +PL LP T PL +P P P + RP+PR P
Sbjct: 4918 PSPLAPSPASPPTEPLVELP-------TEPLAEPPVPSPLPLASSPESARPKPRARPPEE 4970
Query: 348 THHAARVSLHRWGG 361
+ L +W G
Sbjct: 4971 GEDSRPPRLKKWKG 4984
>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
sapiens]
Length = 4911
Score = 36.2 bits (82), Expect = 0.064
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 171 AQLWLGPAAFINHDCKPNC--KFVPAD-GNAACVKVLRDIEPGDEVTCFYGEGFFGEKNE 227
A L GPA +INH C PNC + V + G+ + R I+ G+E+ Y F ++++
Sbjct: 4837 ATLTGGPARYINHSCAPNCVAEVVTFERGHKIIISSSRRIQKGEELCYDYKFDFEDDQHK 4896
Query: 228 ---HCECHTCER 236
HC C +
Sbjct: 4897 IPCHCGAVNCRK 4908
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 36.2 bits (82), Expect = 0.064
Identities = 51/169 (30%), Positives = 59/169 (34%), Gaps = 34/169 (20%)
Query: 281 LGPRACVHPSP-LRRDPFCAACQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPR 339
L P CVH P L R P L +P RP P+ P+P + P P
Sbjct: 229 LDPALCVHLVPQLPRPPV------LPVPPMPPRPPMVPM------PPRPPIAPMPPMAPV 276
Query: 340 P---RRAPVLSTHHAARVSLHRWGGCGPHCRLRGEALVALGQPPHARWAPQQDWHWARRY 396
P R APV A V W P A V G PP A P
Sbjct: 277 PPGSRMAPVPPGPRMAPVP--PWPPMAPVPPWPPMAPVPTG-PPMAPVPPG--------- 324
Query: 397 GLPYVVRVD----LRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPP 441
P + RV + R+ P PP P P G P L P +A P PP
Sbjct: 325 --PPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGPP 371
>gi|157278361 nuclear localized factor 2 [Homo sapiens]
Length = 364
Score = 36.2 bits (82), Expect = 0.064
Identities = 56/169 (33%), Positives = 68/169 (40%), Gaps = 35/169 (20%)
Query: 283 PRACVHPSPLRRDPFCAACQPLRLPACSARPDTSPLWLQWLPQPQPRVRPRKRRRPRPRR 342
P C SP+R AA P R C+A D LW P+ R PR
Sbjct: 40 PAPCTLESPIR-----AAAVPRR---CAAESD---LW------PRAADEDAGRTDWDPRS 82
Query: 343 APVLSTHHAARVSLHRWGGCG----PHCRLRGEALVALGQPPHARWAPQQDWHWARRYGL 398
LS H RV +G C PH R R E+L+ LG PP AP+ H G
Sbjct: 83 QAALSLPHLPRVRT-TYGFCALLESPHTR-RKESLL-LGGPP----APRPRAHSCGGGGG 135
Query: 399 PYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAPFSPPKRLRLV 447
P L PATPA G P +P+ ALA + P+R RL+
Sbjct: 136 PDAPLGTLCGPRGPGPATPAAPGGPR---LPQDALA----AGPRRCRLL 177
>gi|147903292 nuclear localized factor 1 [Homo sapiens]
Length = 369
Score = 36.2 bits (82), Expect = 0.064
Identities = 39/102 (38%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Query: 340 PRRAPVLSTHHAARVSLHRWGGCG----PHCRLRGEALVALGQPPHARWAPQQDWHWARR 395
PR LS H RV +G C PH R R E+L+ LG PP AP+ H
Sbjct: 85 PRSQAALSLPHLPRVRT-AYGFCALLESPHTR-RKESLL-LGGPP----APRPRAHTYGG 137
Query: 396 YGLPYVVRVDLRRLAPAPPATPAPAGTPGPILIPKQALAFAP 437
G P + LR PATPA G P P P+ ALA P
Sbjct: 138 GGGPDALLGTLRVPRAPGPATPAAPGCPRP---PQDALARRP 176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,431,653
Number of Sequences: 37866
Number of extensions: 1284602
Number of successful extensions: 8161
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 7527
Number of HSP's gapped (non-prelim): 653
length of query: 462
length of database: 18,247,518
effective HSP length: 106
effective length of query: 356
effective length of database: 14,233,722
effective search space: 5067205032
effective search space used: 5067205032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.