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Search of human proteins with 31317299
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens] 304 2e-83
gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens] 276 4e-75
gi|31982933 inhibitor of DNA binding 2 [Homo sapiens] 94 5e-20
gi|4504573 inhibitor of DNA binding 4, dominant negative helix-l... 85 3e-17
gi|156119621 inhibitor of DNA binding 3 [Homo sapiens] 82 1e-16
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 45 2e-05
gi|116517330 factor in the germline alpha [Homo sapiens] 41 4e-04
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 41 5e-04
gi|21553337 atonal homolog 7 [Homo sapiens] 40 8e-04
gi|206597481 achaete-scute complex-like 4 [Homo sapiens] 39 0.001
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 39 0.001
gi|31077092 neurogenin 2 [Homo sapiens] 39 0.001
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 39 0.002
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 39 0.002
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 39 0.002
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 38 0.003
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 38 0.004
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 37 0.007
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 37 0.007
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 37 0.007
gi|23111009 myogenic differentiation 1 [Homo sapiens] 37 0.009
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens] 36 0.012
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 35 0.020
gi|38455396 neurogenin 1 [Homo sapiens] 35 0.026
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 35 0.026
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 35 0.026
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 35 0.034
gi|148922889 scleraxis homolog B [Homo sapiens] 34 0.058
gi|4885075 atonal homolog 1 [Homo sapiens] 34 0.058
gi|186972126 scleraxis homolog A [Homo sapiens] 34 0.058
>gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]
Length = 155
Score = 304 bits (778), Expect = 2e-83
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ 60
MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ
Sbjct: 1 MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ 60
Query: 61 QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG 120
QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG
Sbjct: 61 QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG 120
Query: 121 RGLPVRAPLSTLNGEISALTAEAACVPADDRILCR 155
RGLPVRAPLSTLNGEISALTAEAACVPADDRILCR
Sbjct: 121 RGLPVRAPLSTLNGEISALTAEAACVPADDRILCR 155
>gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]
Length = 149
Score = 276 bits (707), Expect = 4e-75
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ 60
MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ
Sbjct: 1 MKVASGSTATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQ 60
Query: 61 QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG 120
QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG
Sbjct: 61 QVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGG 120
Query: 121 RGLPVRAPLSTLNGEISALTAE 142
RGLPVRAPLSTLNGEISALTAE
Sbjct: 121 RGLPVRAPLSTLNGEISALTAE 142
>gi|31982933 inhibitor of DNA binding 2 [Homo sapiens]
Length = 134
Score = 94.0 bits (232), Expect = 5e-20
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 9/99 (9%)
Query: 65 LLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT----PGG 120
LLY+MN CYS+LKELVP++PQN+KVSK+EILQHVIDYI DLQ+ L+S + + G
Sbjct: 35 LLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPG 94
Query: 121 RGLPVRAPLSTLNGEISALTAEAACVPA-----DDRILC 154
+ R PL+TLN +IS L+ +A+ P+ D + LC
Sbjct: 95 QNQASRTPLTTLNTDISILSLQASEFPSELMSNDSKALC 133
>gi|4504573 inhibitor of DNA binding 4, dominant negative
helix-loop-helix protein [Homo sapiens]
Length = 161
Score = 84.7 bits (208), Expect = 3e-17
Identities = 60/148 (40%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 27 GAGEV-VRCLSEQ------SVAISRCAGGAGARLPALLDEQQVNVLLYDMNGCYSRLKEL 79
G GE+ +RCL+E S A + A A + ++ L DMN CYSRL+ L
Sbjct: 19 GGGELALRCLAEHGHSLGGSAAAAAAAAAARCKAAEAAADEPALCLQCDMNDCYSRLRRL 78
Query: 80 VPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEV----------GTPGGR--GLPVRA 127
VPT+P N+KVSKVEILQHVIDYI DLQL L + + P G P R
Sbjct: 79 VPTIPPNKKVSKVEILQHVIDYILDLQLALETHPALLRQPPPPAPPHHPAGTCPAAPPRT 138
Query: 128 PLSTLNGEISALTAEAACVPADDRILCR 155
PL+ LN + A D ILCR
Sbjct: 139 PLTALNTD-----PAGAVNKQGDSILCR 161
>gi|156119621 inhibitor of DNA binding 3 [Homo sapiens]
Length = 119
Score = 82.4 bits (202), Expect = 1e-16
Identities = 53/109 (48%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 19 LKAGKTASGAGEVVRCLSEQSVAISRCAG-GAGARLPALLDEQQVNVLLYDMNGCYSRLK 77
+KA G E V CLSE+S+AI+R G G A P L L DMN CYSRL+
Sbjct: 1 MKALSPVRGCYEAVCCLSERSLAIARGRGKGPAAEEPLSL--------LDDMNHCYSRLR 52
Query: 78 ELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRGLPVR 126
ELVP +P+ ++S+VEILQ VIDYI DLQ+ L +E G P G LP++
Sbjct: 53 ELVPGVPRGTQLSQVEILQRVIDYILDLQVVL-AEPAPGPPDGPHLPIQ 100
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 45.1 bits (105), Expect = 2e-05
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 68 DMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT 117
++NG ++ L++L+PT P ++K+SK EIL+ + YI L LN + E GT
Sbjct: 202 NVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQEEEGT 251
>gi|116517330 factor in the germline alpha [Homo sapiens]
Length = 219
Score = 41.2 bits (95), Expect = 4e-04
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 68 DMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDL 105
++N ++RLK LVP LPQ+RK SKV+IL+ +YI+ L
Sbjct: 80 NLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVL 117
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 40.8 bits (94), Expect = 5e-04
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 6 GSTATAAAGPSCALKAGKTAS---GAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQQV 62
G T +A P+ + G A + E++RC + A + GGA A A +E++
Sbjct: 3 GGTLPRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAA--VARRNERER 60
Query: 63 NVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRG 122
N + +N + L++ VP ++K+SKVE L+ ++YIR LQ L V G
Sbjct: 61 NRVKL-VNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGG 119
Query: 123 LPVRA 127
L +A
Sbjct: 120 LRPQA 124
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 40.0 bits (92), Expect = 8e-04
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 SGSTATAAAGPSCA--LKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQQV 62
SG A A P CA + T +GAG + +S A R A A R
Sbjct: 7 SGPPAGARVAPPCAGGTECAGTCAGAGRL------ESAARRRLAANARERRR-------- 52
Query: 63 NVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT 117
+ +N + RL+ +VP Q++K+SK E LQ + YI L L G+
Sbjct: 53 ---MQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAERFGS 104
>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
Length = 173
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRG-LPVRA 127
+N Y+RL++ +P ++++SKVE L+ IDYI+ LQ EL G G G +P R
Sbjct: 89 VNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQ-ELLERQAWGLEGAAGAVPQRR 147
Query: 128 PLSTLNGEISALTA 141
+GE A +A
Sbjct: 148 AECNSDGESKASSA 161
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 39.3 bits (90), Expect = 0.001
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 14/122 (11%)
Query: 15 PSCALK--AGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQQVNVL----LYD 68
PSC AG G +R LS + A +R + Q NV +
Sbjct: 119 PSCLAYPCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQS 178
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIR--------DLQLELNSESEVGTPGG 120
+N + L+ +PTLP +++SKV+ L+ I YI DL L G PGG
Sbjct: 179 INDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLPLRGGGAGGCGGPGG 238
Query: 121 RG 122
G
Sbjct: 239 GG 240
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 39.3 bits (90), Expect = 0.001
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 66 LYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRGLP 124
++++N L+E++PT P++ K++K+E L+ +YI L L G GG GLP
Sbjct: 125 MHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLADHCG-GGGGGLP 182
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT-PGGRGLPVRA 127
+N Y+RL+ +P +++SKVE L+ I YI+ LQ L+S + T P RGLP
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPASRGLPGTG 265
Query: 128 P 128
P
Sbjct: 266 P 266
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT-PGGRGLPVRA 127
+N Y+RL+ +P +++SKVE L+ I YI+ LQ L+S + T P RGLP
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPASRGLPGTG 265
Query: 128 P 128
P
Sbjct: 266 P 266
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 38.5 bits (88), Expect = 0.002
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT-PGGRGLPVRA 127
+N Y+RL+ +P +++SKVE L+ I YI+ LQ L+S + T P RGLP
Sbjct: 206 VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSSAPDGSTPPASRGLPGTG 265
Query: 128 P 128
P
Sbjct: 266 P 266
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 38.1 bits (87), Expect = 0.003
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 44 RCAGGAGARLPALL--DEQQVNVLLYD----MNGCYSRLKELVPTLPQNRKVSKVEILQH 97
R AGG G P ++ Q N D +N ++ L+ L+PT P +RK+SK+E L+
Sbjct: 57 RRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRL 116
Query: 98 VIDYIRDLQ--LELNSESEVGTP 118
YI L L L ++ G P
Sbjct: 117 ASSYIAHLANVLLLGDSADDGQP 139
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 37.7 bits (86), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 68 DMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEV-----GTPGGRG 122
++NG ++ L++L+PT P +RK+SK E+L+ + YI L L ++ PG R
Sbjct: 165 NVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAGPTPPGPRK 224
Query: 123 LPV 125
PV
Sbjct: 225 RPV 227
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 37.0 bits (84), Expect = 0.007
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 70 NGCYSRLKELVPTLPQNRKVSKVEILQHVIDYI 102
N ++ L++L+PTLP ++K+SK+EIL+ I YI
Sbjct: 94 NLAFAELRKLLPTLPPDKKLSKIEILRLAICYI 126
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 37.0 bits (84), Expect = 0.007
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 70 NGCYSRLKELVPTLPQNRKVSKVEILQHVIDYI 102
N ++ L++L+PTLP ++K+SK+EIL+ I YI
Sbjct: 94 NLAFAELRKLLPTLPPDKKLSKIEILRLAICYI 126
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 37.0 bits (84), Expect = 0.007
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 70 NGCYSRLKELVPTLPQNRKVSKVEILQHVIDYI 102
N ++ L++L+PTLP ++K+SK+EIL+ I YI
Sbjct: 92 NLAFAELRKLLPTLPPDKKLSKIEILRLAICYI 124
>gi|23111009 myogenic differentiation 1 [Homo sapiens]
Length = 320
Score = 36.6 bits (83), Expect = 0.009
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 23 KTASGAGEVVRCLSEQSVAISRCAGGAGARLPALLDEQQVNVLLYDMNGCYSRLKELVPT 82
+ SG + RCL A R A R A + E++ L +N + LK +
Sbjct: 82 RAPSGHHQAGRCLLWACKACKRKTTNADRRKAATMRERR---RLSKVNEAFETLKRCTSS 138
Query: 83 LPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRGLPVRAP 128
P N+++ KVEIL++ I YI LQ L + P G AP
Sbjct: 139 NP-NQRLPKVEILRNAIRYIEGLQALLRDQD--AAPPGAAAAFYAP 181
>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
Length = 236
Score = 36.2 bits (82), Expect = 0.012
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 73 YSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEV 115
++ L+E VP N+K+SKVE L+ ++YIR LQ L+ V
Sbjct: 138 FATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAV 180
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 35.4 bits (80), Expect = 0.020
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 66 LYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTPGGRG 122
++ +N + L+E++P + ++K+SK+E L +YI+ L + + S PG G
Sbjct: 88 MHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATILTMSSSRLPGLEG 144
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 35.0 bits (79), Expect = 0.026
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 9 ATAAAGPSCALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGARLPALL----------- 57
A+A+ P+ A + S A EV ++ R G R ALL
Sbjct: 39 ASASGPPAPARRGAPNISRASEVPGAQDDEQERRRR-RGRTRVRSEALLHSLRRSRRVKA 97
Query: 58 DEQQVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGT 117
++++ N ++++N L+ ++P+ P + K++K+E L+ +YI L L ++ G
Sbjct: 98 NDRERN-RMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRL-ADQGL 155
Query: 118 PGG 120
PGG
Sbjct: 156 PGG 158
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 35.0 bits (79), Expect = 0.026
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESEVGTP 118
+N ++ L+E +P +P + K+SK++ L+ YI L L +++ G P
Sbjct: 110 INSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQSGDP 159
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 35.0 bits (79), Expect = 0.026
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 68 DMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSES 113
++N +++L++L+PT P ++K+SK E L+ + YI L L +S
Sbjct: 17 NVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQS 62
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 34.7 bits (78), Expect = 0.034
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 56 LLDEQQVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLE 108
+L+ Q+ N D+ + L++ VP L +N K +KV IL+ +Y+ LQ E
Sbjct: 388 ILERQRRN----DLRSSFLTLRDHVPELVKNEKAAKVVILKKATEYVHSLQAE 436
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 33.9 bits (76), Expect = 0.058
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDL 105
+N ++ L+ L+PT P +RK+SK+E L+ YI L
Sbjct: 91 VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHL 127
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 33.9 bits (76), Expect = 0.058
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 24/136 (17%)
Query: 4 ASGSTATAAAGPS------CALKAGKTASGAGEVVRCLSEQSVAISRCAGGAGA--RLPA 55
+ G++++ + GP C LK G G S Q S+ G RL A
Sbjct: 110 SGGASSSKSPGPVKVREQLCKLKGGVVVDELG-----CSRQRAPSSKQVNGVQKQRRLAA 164
Query: 56 LLDEQQVNVLLYDMNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDLQLELNSESE- 114
E++ ++ +N + +L+ ++P+ ++K+SK E LQ Q+ +N+ SE
Sbjct: 165 NARERR---RMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMA-------QIYINALSEL 214
Query: 115 VGTPGGRGLPVRAPLS 130
+ TP G P P S
Sbjct: 215 LQTPSGGEQPPPPPAS 230
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 33.9 bits (76), Expect = 0.058
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 69 MNGCYSRLKELVPTLPQNRKVSKVEILQHVIDYIRDL 105
+N ++ L+ L+PT P +RK+SK+E L+ YI L
Sbjct: 91 VNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHL 127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,832,484
Number of Sequences: 37866
Number of extensions: 244614
Number of successful extensions: 1064
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 999
Number of HSP's gapped (non-prelim): 89
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.