Guide to the Human Genome
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Name: ID3 Sequence: fasta or formatted (119aa) NCBI GI: 156119621
Description:

inhibitor of DNA binding 3

Referenced in:

Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6          9           2
 C cysteine            4.2          5           2
 D aspartate           5.0          6           2
 E glutamate           7.6          9           2
 F phenylalanine       0.8          1           1
 G glycine             6.7          8           1
 H histidine           2.5          3           1
 I isoleucine          5.0          6           1
 K lysine              2.5          3           1
 L leucine            13.4         16           2
 M methionine          1.7          2           1
 N asparagine          1.7          2           1
 P proline            10.1         12           2
 Q glutamine           4.2          5           1
 R arginine            7.6          9           1
 S serine              6.7          8           1
 T threonine           2.5          3           1
 V valine              7.6          9           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   inhibitor of DNA binding 3 
ID2                   0.269   inhibitor of DNA binding 2 
ID1                   0.260   inhibitor of DNA binding 1 isoform a 
ID1                   0.260   inhibitor of DNA binding 1 isoform b 
ID4                   0.260   inhibitor of DNA binding 4, dominant negative helix-l...
HAND1                 0.087   basic helix-loop-helix transcription factor HAND1 [Ho...
TCF23                 0.055   transcription factor 23 
LOC100129654          0.055   PREDICTED: similar to transcription factor 23 [Homo...
LOC100129654          0.055   PREDICTED: similar to transcription factor 23 [Homo...
HAND2                 0.055   basic helix-loop-helix transcription factor HAND2 [H...
LOC100129654          0.046   PREDICTED: similar to transcription factor 23 [Homo...
ASCL5                 0.046   PREDICTED: achaete-scute complex homolog 5 (Drosoph...
ASCL5                 0.046   PREDICTED: achaete-scute complex homolog 5 (Drosoph...
ASCL5                 0.046   PREDICTED: achaete-scute complex homolog 5 
ASCL4                 0.046   achaete-scute complex-like 4 
MSC                   0.046   musculin 
ATOH7                 0.046   atonal homolog 7 
ATOH1                 0.046   atonal homolog 1 
TAL2                  0.041   T-cell acute lymphocytic leukemia 2 
NHLH2                 0.037   nescient helix loop helix 2 
NHLH2                 0.037   nescient helix loop helix 2 
TCF21                 0.037   transcription factor 21 
TCF21                 0.037   transcription factor 21 
NHLH1                 0.037   nescient helix loop helix 1 
NEUROG1               0.032   neurogenin 1 
FIGLA                 0.032   factor in the germline alpha 
ASCL1                 0.027   achaete-scute complex homolog 1 
ASCL2                 0.027   achaete-scute complex homolog-like 2 
LYL1                  0.027   lymphoblastic leukemia derived sequence 1 
SCXB                  0.023   scleraxis homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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