Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 31077092
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31077092 neurogenin 2 [Homo sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31077092 neurogenin 2 [Homo sapiens] 546 e-156
gi|38455396 neurogenin 1 [Homo sapiens] 130 1e-30
gi|68989258 neurogenin 3 [Homo sapiens] 127 8e-30
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 86 3e-17
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 86 3e-17
gi|27475985 neurogenic differentiation 6 [Homo sapiens] 82 7e-16
gi|153792190 neurogenic differentiation 4 [Homo sapiens] 80 2e-15
gi|4885075 atonal homolog 1 [Homo sapiens] 79 6e-15
gi|28411948 oligodendrocyte transcription factor 3 [Homo sapiens] 72 4e-13
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 72 7e-13
gi|4507741 twist [Homo sapiens] 71 1e-12
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 71 1e-12
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo... 67 2e-11
gi|116805332 musculin [Homo sapiens] 65 8e-11
gi|21553337 atonal homolog 7 [Homo sapiens] 64 1e-10
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 63 2e-10
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 63 2e-10
gi|148922889 scleraxis homolog B [Homo sapiens] 63 3e-10
gi|186972126 scleraxis homolog A [Homo sapiens] 63 3e-10
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 63 3e-10
gi|226498192 atonal homolog 8 [Homo sapiens] 62 4e-10
gi|57529222 basic helix-loop-helix domain containing, class B, 4... 60 2e-09
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 60 3e-09
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 60 3e-09
gi|17981708 twist homolog 2 [Homo sapiens] 59 3e-09
gi|23097242 nephew of atonal 3 [Homo sapiens] 58 8e-09
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 55 5e-08
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 55 9e-08
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 55 9e-08
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 55 9e-08
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 546 bits (1408), Expect = e-156
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MFVKSETLELKEEEDVLVLLGSASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAG 60
MFVKSETLELKEEEDVLVLLGSASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAG
Sbjct: 1 MFVKSETLELKEEEDVLVLLGSASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAG 60
Query: 61 QGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNR 120
QGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNR
Sbjct: 61 QGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNR 120
Query: 121 ERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLADHCGGGGGG 180
ERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLADHCGGGGGG
Sbjct: 121 ERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLADHCGGGGGG 180
Query: 181 LPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSP 240
LPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSP
Sbjct: 181 LPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSP 240
Query: 241 ASPAGSDMDYWQPPPPDKHRYAPHLPIARDCI 272
ASPAGSDMDYWQPPPPDKHRYAPHLPIARDCI
Sbjct: 241 ASPAGSDMDYWQPPPPDKHRYAPHLPIARDCI 272
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 130 bits (327), Expect = 1e-30
Identities = 88/206 (42%), Positives = 113/206 (54%), Gaps = 23/206 (11%)
Query: 51 ARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIK 110
AR Q+ A A G GA A + D ++ R R +R ++ + ++
Sbjct: 33 ARLQQAASAS-GPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTR-VRSEALLHSLR 90
Query: 111 KTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRL 170
++RR+KAN+RERNRMHNLNAALDALR VLP+FP+D KLTKIETLRFA+NYIWAL ETLRL
Sbjct: 91 RSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRL 150
Query: 171 ADHCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNS 230
AD GGG L + V PG PSPAS S A ++S S+
Sbjct: 151 ADQGLPGGGARERLLPPQCVPCLPG-----------PPSPASDAESWGSGAAAASPLSD- 198
Query: 231 TSPYSCTLSPASPAGSDMDYWQPPPP 256
P+SPA S+ ++P P
Sbjct: 199 ---------PSSPAASEDFTYRPGDP 215
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 127 bits (320), Expect = 8e-30
Identities = 92/200 (46%), Positives = 109/200 (54%), Gaps = 46/200 (23%)
Query: 64 RGGVAAGAEG-CRPARLLGLVHDCKRRPSRARAVSRGAKTAE-TVQRIKKTRRLKANNRE 121
RG A EG CR A R RAR R +E + + +++RR KAN+RE
Sbjct: 43 RGNCAEAEEGGCRGAP----------RKLRARRGGRSRPKSELALSKQRRSRRKKANDRE 92
Query: 122 RNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLAD--------- 172
RNRMHNLN+ALDALR VLPTFP+DAKLTKIETLRFAHNYIWALT+TLR+AD
Sbjct: 93 RNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSLYALEPP 152
Query: 173 --HCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNS 230
HCG G SPGG S GD S S S S +P++S+
Sbjct: 153 APHCGELG--------------SPGG------SPGDWGSLYSPVSQAGSLSPAASLEERP 192
Query: 231 ---TSPYSCTLSPASPAGSD 247
+ +S LSP S A SD
Sbjct: 193 GLLGATFSACLSPGSLAFSD 212
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 86.3 bits (212), Expect = 3e-17
Identities = 60/135 (44%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 45 PGASGGARR--------QRGAEA--GQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRAR 94
PGA G AR + G EA + G G E GL RP + R
Sbjct: 46 PGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKK-R 104
Query: 95 AVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETL 154
+ T ++R K RR KAN RERNRMH+LNAALD LR+V+P + + KL+KIETL
Sbjct: 105 GPKKRKMTKARLER-SKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETL 163
Query: 155 RFAHNYIWALTETLR 169
R A NYIWAL+E LR
Sbjct: 164 RLAKNYIWALSEILR 178
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 85.9 bits (211), Expect = 3e-17
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 85 DCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPE 144
D ++P R R + T ++R K RR+KAN RERNRMH LNAALD LR+V+P + +
Sbjct: 76 DDDQKPKR-RGPKKKKMTKARLERFK-LRRMKANARERNRMHGLNAALDNLRKVVPCYSK 133
Query: 145 DAKLTKIETLRFAHNYIWALTETLR 169
KL+KIETLR A NYIWAL+E LR
Sbjct: 134 TQKLSKIETLRLAKNYIWALSEILR 158
>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
Length = 337
Score = 81.6 bits (200), Expect = 7e-16
Identities = 43/79 (54%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 92 RARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKI 151
R R + + T ++R+K RR +AN RERNRMH LN ALD LR+V+P + + KL+KI
Sbjct: 75 RRRGLRKKKTTKLRLERVK-FRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKI 133
Query: 152 ETLRFAHNYIWALTETLRL 170
ETLR A NYIWAL+E LR+
Sbjct: 134 ETLRLAKNYIWALSEILRI 152
>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
Length = 331
Score = 80.1 bits (196), Expect = 2e-15
Identities = 62/170 (36%), Positives = 82/170 (48%), Gaps = 46/170 (27%)
Query: 9 ELKEEEDVLVLLGSASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAGQGARGGVA 68
E+KEEE G L++LT S +EEEEEE G ++RG +
Sbjct: 30 EVKEEESRPGTYGM----LSSLTEEHDSIEEEEEEEE--DGEKPKRRGPK---------- 73
Query: 69 AGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNL 128
K++ ++AR ++R + RR+KAN RER RMH L
Sbjct: 74 ------------------KKKMTKAR-----------LERFR-ARRVKANARERTRMHGL 103
Query: 129 NAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLADHCGGGG 178
N ALD LR V+P + + KL+KIETLR A NYIWAL+E L G G
Sbjct: 104 NDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKG 153
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 78.6 bits (192), Expect = 6e-15
Identities = 77/214 (35%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 24 SPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLV 83
SP L A S A +E G RR G + + G V + C+ L G V
Sbjct: 84 SPELGA-----SEAAAPRDEVDGRGELVRRSSGGASSSKSPGPVKVREQLCK---LKGGV 135
Query: 84 HDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFP 143
+ SR RA S ++ V ++K RRL AN RER RMH LN A D LR V+P+F
Sbjct: 136 VVDELGCSRQRAPS-----SKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFN 190
Query: 144 EDAKLTKIETLRFAHNYIWALTETLRLADHCGGGGGGLPGA--------LFSEAVLLSPG 195
D KL+K ETL+ A YI AL+E L+ GG P A L + A
Sbjct: 191 NDKKLSKYETLQMAQIYINALSELLQTPS--GGEQPPPPPASCKSDHHHLRTAASYEGGA 248
Query: 196 G---ASAALSSSGDSPSPASTWSC-TNSPAPSSS 225
G A+ A +SG S P SC T AP+S+
Sbjct: 249 GNATAAGAQQASGGSQRPTPPGSCRTRFSAPASA 282
>gi|28411948 oligodendrocyte transcription factor 3 [Homo sapiens]
Length = 272
Score = 72.4 bits (176), Expect = 4e-13
Identities = 58/172 (33%), Positives = 73/172 (42%), Gaps = 35/172 (20%)
Query: 114 RLKANNRERNRMHNLNAALDALREVLPTF--PEDAKLTKIETLRFAHNYIWALTETL--- 168
RLK N RER RMH+LN A+D LREV+P P KL+KI TL A NYI LT +L
Sbjct: 85 RLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEM 144
Query: 169 -----------RLADHCG--GGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPASTWS 215
A HCG G G P + + P A S + SP A++
Sbjct: 145 KRLVGEIYGGHHSAFHCGTVGHSAGHPAHAANSVHPVHPILGGALSSGNASSPLSAASLP 204
Query: 216 CTNSPAPSSSVSSNSTSPYSCTLSPASPAGSDMDYW-----------QPPPP 256
+ P S+ ++P PA GS +W PPPP
Sbjct: 205 AIGTIRPPHSLLKAPSTP------PALQLGSGFQHWAGLPCPCTICQMPPPP 250
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 71.6 bits (174), Expect = 7e-13
Identities = 78/264 (29%), Positives = 106/264 (40%), Gaps = 51/264 (19%)
Query: 2 FVKSETLELKEEEDVLVLLGSASPALA-ALTPLSSSADEEEEEEPGASGGARRQRGAEAG 60
F+ + E + +LL A PA AL P SS E ++ G GG + GA G
Sbjct: 52 FLSHQLHEYCYRDGACLLLQPAPPAAPLALAPPSSGGLGEPDD--GGGGGYCCETGAPPG 109
Query: 61 ---------QGARGGVAAGAEGCRP-ARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIK 110
AGA P ARL GL A A +R + + ++
Sbjct: 110 GFPYSPGSPPSCLAYPCAGAAVLSPGARLRGL-------SGAAAAAARRRRRVRSEAELQ 162
Query: 111 KTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRL 170
+ R+ AN RER RM ++N A + LR +PT P + +L+K++TLR A YI L+E ++
Sbjct: 163 QLRQA-ANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQA 221
Query: 171 ADHCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNS 230
GGG G G PGG GDSP S +
Sbjct: 222 DLPLRGGGAGGCG---------GPGGGGRL---GGDSP------------------GSQA 251
Query: 231 TSPYSCTLSPASPAGSDMDYWQPP 254
C SP+ SD DY PP
Sbjct: 252 QKVIICHRGTRSPSPSDPDYGLPP 275
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 70.9 bits (172), Expect = 1e-12
Identities = 60/168 (35%), Positives = 85/168 (50%), Gaps = 29/168 (17%)
Query: 22 SASPALAALTPLSSSADEEEEEEP--GASGG-----ARRQRGAEAGQG--ARGGVAAGAE 72
S+SP A LS+S +E + ++P G GG +RR G AG G A GGV G E
Sbjct: 6 SSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAGGGAGPGGAAGGGVGGGDE 65
Query: 73 GCRPARLLGLVHDCKRRPSRARA-----------VSRGAKTAETVQRIKKTRRLKANNRE 121
PA+ KR A S G + ++ + ++ T+R+ AN RE
Sbjct: 66 PGSPAQ-------GKRGKKSAGCGGGGGAGGGGGSSSGGGSPQSYEELQ-TQRVMANVRE 117
Query: 122 RNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLR 169
R R +LN A ALR+++PT P D KL+KI+TL+ A YI L + L+
Sbjct: 118 RQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQ 164
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 70.9 bits (172), Expect = 1e-12
Identities = 52/131 (39%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 38 DEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVS 97
D E G G+ G E +G R A A AR G +RRP +
Sbjct: 16 DTEATPGEGTPDGSLPNPGPEPAKGLRSRPARAA-----ARAPG--EGRRRRPGPS---G 65
Query: 98 RGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFA 157
G + ++QR RL++N RER RMH LN A ALREV+P D KL+KIETL A
Sbjct: 66 PGGRRDSSIQR-----RLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLA 120
Query: 158 HNYIWALTETL 168
NYI +LT T+
Sbjct: 121 KNYIKSLTATI 131
>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
sapiens]
Length = 323
Score = 66.6 bits (161), Expect = 2e-11
Identities = 72/248 (29%), Positives = 104/248 (41%), Gaps = 26/248 (10%)
Query: 12 EEEDVLVLLGSASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAGQGARGGVAAGA 71
E +D+ + S + +A T + S+ + P S RGA GA G G
Sbjct: 16 EPDDLFLPARSKGSSGSAFTGGTVSSSTPSDCPPELSA---ELRGAMGSAGAHPGDKLGG 72
Query: 72 EGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAA 131
G + + S A A S + + + RLK N+RER RMH+LN A
Sbjct: 73 SGFKSSS-----SSTSSSTSSAAASSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIA 127
Query: 132 LDALREVLPTF--PEDAKLTKIETLRFAHNYIWALTETL----RLADHCGGG--GGGLP- 182
+D LREV+P P KL+KI TL A NYI LT +L RL GG G P
Sbjct: 128 MDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGFHPS 187
Query: 183 --GALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSP 240
G L A L + AA + + P+ + P + ++ + + + +S
Sbjct: 188 ACGGLAHSAPLPAATAHPAAAAHAAHHPA-------VHHPILPPAAAAAAAAAAAAAVSS 240
Query: 241 ASPAGSDM 248
AS GS +
Sbjct: 241 ASLPGSGL 248
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 64.7 bits (156), Expect = 8e-11
Identities = 50/145 (34%), Positives = 71/145 (48%), Gaps = 33/145 (22%)
Query: 34 SSSADEEE---EEE------PGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVH 84
+SSA+EE+ EEE G++ G +R+R AG G GG +AG G +P G
Sbjct: 44 NSSAEEEDPDGEEERCALGTAGSAEGCKRKRPRVAGGGGAGG-SAGGGGKKPLPAKGSAA 102
Query: 85 DCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPE 144
+CK+ ++R AN RER RM L+ A L+ LP P
Sbjct: 103 ECKQ-----------------------SQRNAANARERARMRVLSKAFSRLKTSLPWVPP 139
Query: 145 DAKLTKIETLRFAHNYIWALTETLR 169
D KL+K++TLR A +YI L + L+
Sbjct: 140 DTKLSKLDTLRLASSYIAHLRQLLQ 164
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 64.3 bits (155), Expect = 1e-10
Identities = 38/77 (49%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 99 GAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAH 158
GA E+ R RRL AN RER RM LN A D LR V+P + +D KL+K ETL+ A
Sbjct: 31 GAGRLESAAR----RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMAL 86
Query: 159 NYIWALTETLRLADHCG 175
+YI ALT L A+ G
Sbjct: 87 SYIMALTRILAEAERFG 103
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 63.2 bits (152), Expect = 2e-10
Identities = 54/158 (34%), Positives = 71/158 (44%), Gaps = 25/158 (15%)
Query: 87 KRRPSRARA-VSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPED 145
KRRPS ++ G T K RR+ N+RER R N+N A LR+++PT P D
Sbjct: 168 KRRPSPYEMEITDGPHT-------KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPD 220
Query: 146 AKLTKIETLRFAHNYIWALTETLRLADH---------------CGGGGGGLPGALFSEAV 190
KL+K E LR A YI L + L + GGGGGG G + +
Sbjct: 221 KKLSKNEILRLAMKYINFLAKLLNDQEEEGTQRAKTGKDPVVGAGGGGGGGGGGAPPDDL 280
Query: 191 LLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSS 228
L +++ SS D AS S T PAP + S
Sbjct: 281 LQDVLSPNSSCGSSLD--GAASPDSYTEEPAPKHTARS 316
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 63.2 bits (152), Expect = 2e-10
Identities = 60/187 (32%), Positives = 72/187 (38%), Gaps = 41/187 (21%)
Query: 36 SADEEEEEEPGAS----GGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPS 91
S DEE E AS G A G G GG AG G
Sbjct: 22 SEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGG------------------ 63
Query: 92 RARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKI 151
GA V++ R AN RER+R ++N A ALR ++PT P D KL+KI
Sbjct: 64 -------GAGPVVVVRQ-----RQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKI 111
Query: 152 ETLRFAHNYIWALTETLRLADHCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPA 211
ETLR A +YI L L L D G A S GA A + G P
Sbjct: 112 ETLRLASSYIAHLANVLLLGDSADDGQPCFRAA-------GSAKGAVPAAADGGRQPRSI 164
Query: 212 STWSCTN 218
T+ +N
Sbjct: 165 CTFCLSN 171
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 62.8 bits (151), Expect = 3e-10
Identities = 52/160 (32%), Positives = 65/160 (40%), Gaps = 43/160 (26%)
Query: 34 SSSADEE----EEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRR 89
SS +DE+ G G RR G AG G GG R
Sbjct: 32 SSGSDEKPCRVHAARCGLQGARRRAGGRRAGGGGPGG----------------------R 69
Query: 90 PSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLT 149
P R + +R AN RER+R +++N A ALR ++PT P D KL+
Sbjct: 70 PGR-----------------EPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLS 112
Query: 150 KIETLRFAHNYIWALTETLRLADHCGGGGGGLPGALFSEA 189
KIETLR A +YI L L + CG G G F A
Sbjct: 113 KIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHA 152
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 62.8 bits (151), Expect = 3e-10
Identities = 52/160 (32%), Positives = 65/160 (40%), Gaps = 43/160 (26%)
Query: 34 SSSADEE----EEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRR 89
SS +DE+ G G RR G AG G GG R
Sbjct: 32 SSGSDEKPCRVHAARCGLQGARRRAGGRRAGGGGPGG----------------------R 69
Query: 90 PSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLT 149
P R + +R AN RER+R +++N A ALR ++PT P D KL+
Sbjct: 70 PGR-----------------EPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLS 112
Query: 150 KIETLRFAHNYIWALTETLRLADHCGGGGGGLPGALFSEA 189
KIETLR A +YI L L + CG G G F A
Sbjct: 113 KIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHA 152
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 62.8 bits (151), Expect = 3e-10
Identities = 66/209 (31%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 45 PGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAE 104
PG GG + G GG +G+ G S + + S K+ E
Sbjct: 197 PGGLGGGGGGGSSSGSSGGGGGSGSGSGG-----------------SSSSSSSSSKKSKE 239
Query: 105 TVQRIKKTRRLKANNRERNRMHNLNAALDALREVLP--TFPEDAKLTKIETLRFAHNYI- 161
+K RL N RER RMH+LN ALD LR V+P P KL+KI TL A NYI
Sbjct: 240 -----QKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYIL 294
Query: 162 ---WALTETLRLADHCGGG----GGGLPGALFSEAVLLSPGGASAALSSSGDSPSPAS-- 212
AL E RL + G LP + + A + A A + P A
Sbjct: 295 MQAQALEEMRRLVAYLNQGQAISAASLPSSAAAAAAAAALHPALGAYEQAAGYPFSAGLP 354
Query: 213 -TWSCTNSPAPSSSVSSNSTSPYSCTLSP 240
SC A +SVSS+ CT P
Sbjct: 355 PAASCPEKCALFNSVSSSLCK--QCTEKP 381
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 62.4 bits (150), Expect = 4e-10
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 87 KRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDA 146
++RP A A S ++ +++TRRL AN RER R+H ++AA +ALR+ +P +
Sbjct: 211 RKRPGEATAAS------SEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQ 264
Query: 147 KLTKIETLRFAHNYIWALTETLRLAD 172
KL+K+ LR A NYI +L RLAD
Sbjct: 265 KLSKLAILRIACNYILSLA---RLAD 287
>gi|57529222 basic helix-loop-helix domain containing, class B, 4
[Homo sapiens]
Length = 225
Score = 60.1 bits (144), Expect = 2e-09
Identities = 67/209 (32%), Positives = 83/209 (39%), Gaps = 56/209 (26%)
Query: 23 ASPALAALTPLSSSADEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGL 82
A+PA A + S+ E+ +E A RR+RG G
Sbjct: 51 AAPAPRAPAQAAESSGEQSGDEDDAFEQRRRRRGP-----------------------GS 87
Query: 83 VHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLP-- 140
D +RRP R++ RL N RER RMH+LN ALD LR V+P
Sbjct: 88 AADGRRRPREQRSL-----------------RLSINARERRRMHDLNDALDGLRAVIPYA 130
Query: 141 TFPEDAKLTKIETLRFAHNYI----WALTETLRLADHCGGGGG------GLPGALFSEAV 190
P KL+KI TL A NYI AL E RL G G P F +A
Sbjct: 131 HSPSVRKLSKIATLLLAKNYILMQAQALDEMRRLVAFLNQGQGLAAPVNAAPLTPFGQAT 190
Query: 191 LLSPGGASAALSSSGDSPSPASTWSCTNS 219
+ P A AAL G P + +S T S
Sbjct: 191 -VCPFSAGAAL---GPCPDKCAAFSGTPS 215
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 59.7 bits (143), Expect = 3e-09
Identities = 56/168 (33%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 86 CKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPED 145
C RR A A + G A + N RERNR+ +N ALR+ +P
Sbjct: 34 CSRRRRPATAETGGGAAAVA----------RRNERERNRVKLVNLGFQALRQHVPHGGAS 83
Query: 146 AKLTKIETLRFAHNYIWALTETLRLADHCGG--GGGGLPGALFSEAVLLSPGGASAALSS 203
KL+K+ETLR A YI AL L D GG P A+ A PG A S
Sbjct: 84 KKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASP 143
Query: 204 SGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSPASPAGSDMDYW 251
S S SP S + P S S+ S LSPA D W
Sbjct: 144 SRASSSPGRGGS--SEPGSPRSAYSSDDSGCEGALSPAERELLDFSSW 189
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 59.7 bits (143), Expect = 3e-09
Identities = 38/83 (45%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 87 KRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDA 146
KRRPS AE Q K RR+ N+RER R N+N A LR++LPT P D
Sbjct: 130 KRRPSHCEL-----DLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDR 184
Query: 147 KLTKIETLRFAHNYIWALTETLR 169
KL+K E LR A YI L LR
Sbjct: 185 KLSKNEVLRLAMKYIGFLVRLLR 207
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 59.3 bits (142), Expect = 3e-09
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 34/151 (22%)
Query: 21 GSASPALAALTPLSS--SADEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPAR 78
GS+SP ++P+ S +++EE E +P G RR + G+
Sbjct: 4 GSSSP----VSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGS--------------- 44
Query: 79 LLGLVHDCKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREV 138
P+ + +G+ +A++ + ++ ++R+ AN RER R +LN A ALR++
Sbjct: 45 -----------PTPGKRGKKGSPSAQSFEELQ-SQRILANVRERQRTQSLNEAFAALRKI 92
Query: 139 LPTFPEDAKLTKIETLRFAHNYIWALTETLR 169
+PT P D KL+KI+TL+ A YI L + L+
Sbjct: 93 IPTLPSD-KLSKIQTLKLAARYIDFLYQVLQ 122
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 58.2 bits (139), Expect = 8e-09
Identities = 46/131 (35%), Positives = 57/131 (43%), Gaps = 34/131 (25%)
Query: 38 DEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVS 97
D EEEE G + E G+G LLG RP R R ++
Sbjct: 61 DPEEEECEVDQGDGEEEEEEERGRGVS--------------LLG-------RPKRKRVIT 99
Query: 98 RGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFA 157
+ A AN RER RM NLN A D LR +PTF + +L++IETLR A
Sbjct: 100 YAQRQA-------------ANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLA 146
Query: 158 HNYIWALTETL 168
YI +TE L
Sbjct: 147 IVYISFMTELL 157
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 55.5 bits (132), Expect = 5e-08
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 112 TRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETL--R 169
TR++ N RER R N+N+A LR+++PT P D KL+K ETLR A YI L + L +
Sbjct: 2 TRKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQ 61
Query: 170 LADHCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSP 210
G G LF + L PG L + PSP
Sbjct: 62 SLQQTGVAAQGNILGLFPQGPHL-PGLEDRTLLENYQVPSP 101
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 54.7 bits (130), Expect = 9e-08
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 113 RRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLAD 172
RR AN +ER R ++N+A LRE +P P D KL+KI+TLR A +YI L + L D
Sbjct: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159
Query: 173 HCG 175
G
Sbjct: 160 QNG 162
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 54.7 bits (130), Expect = 9e-08
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 99 GAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTF-------PEDAKLTKI 151
G+ + + ++ R K N+RER RM +LN A+DALREV+ + KL+KI
Sbjct: 92 GSARPDAKEEQQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGRKLSKI 151
Query: 152 ETLRFAHNYIWALTETLRLADHCGGGGGG--LPGALFSEAVLLSPGGASAALSSSGDSPS 209
TL A NYI L +L+ G G G P L + LL+ S L+ P
Sbjct: 152 ATLLLARNYILLLGSSLQELRRALGEGAGPAAPRLLLAGLPLLAAAPGSVLLAPGAVGPP 211
Query: 210 PA 211
A
Sbjct: 212 DA 213
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 54.7 bits (130), Expect = 9e-08
Identities = 51/131 (38%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 42 EEEPGAS--GGARRQRGAEAGQGARGGVAAGAEGCRPAR--LLGLVHDCKRRPSRARAVS 97
E E G S GG GA G G GG A G E P R L L + +RR RA A
Sbjct: 18 ETESGFSDCGGGAGPDGAGPG-GPGGGQARGPEPGEPGRKDLQHLSREERRRRRRATAKY 76
Query: 98 RGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFA 157
R A RER R+ N A LR++LPT P D KL+KIE LR A
Sbjct: 77 RTAHAT----------------RERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLA 120
Query: 158 HNYIWALTETL 168
YI L L
Sbjct: 121 ICYISYLNHVL 131
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,788,345
Number of Sequences: 37866
Number of extensions: 731571
Number of successful extensions: 8014
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 383
Number of HSP's that attempted gapping in prelim test: 6450
Number of HSP's gapped (non-prelim): 1647
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.