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Search of human proteins with 30794264
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
(184 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30794264 glycosylphosphatidylinositol anchored high density l... 387 e-108
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 45 5e-05
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 42 3e-04
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 42 3e-04
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 41 5e-04
gi|54607116 leiomodin 3 (fetal) [Homo sapiens] 41 5e-04
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 40 0.001
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 40 0.001
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 40 0.001
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 40 0.001
gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo... 40 0.001
gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo... 40 0.001
gi|55956788 nucleolin [Homo sapiens] 39 0.003
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 39 0.003
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 39 0.003
gi|118600967 shroom family member 4 [Homo sapiens] 38 0.004
gi|4757900 calreticulin precursor [Homo sapiens] 38 0.006
gi|17975763 myelin transcription factor 1 [Homo sapiens] 38 0.006
gi|31543392 peroxisome proliferator-activated receptor gamma, co... 38 0.006
gi|51477718 TATA box binding protein-associated factor, RNA poly... 38 0.006
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 38 0.006
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 38 0.006
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 38 0.006
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 38 0.006
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 37 0.007
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 37 0.007
gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens] 37 0.007
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.007
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.007
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.007
>gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
Length = 184
Score = 387 bits (995), Expect = e-108
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 MKALGAVLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSR 60
MKALGAVLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSR
Sbjct: 1 MKALGAVLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSR 60
Query: 61 VLLRCYTCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKT 120
VLLRCYTCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKT
Sbjct: 61 VLLRCYTCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKT 120
Query: 121 VEGTQVTMTCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGSSETVGAALLLNLLAGLGAMG 180
VEGTQVTMTCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGSSETVGAALLLNLLAGLGAMG
Sbjct: 121 VEGTQVTMTCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGSSETVGAALLLNLLAGLGAMG 180
Query: 181 ARRP 184
ARRP
Sbjct: 181 ARRP 184
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 44.7 bits (104), Expect = 5e-05
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 63 LRCYTCKSLPRDERCNLTQNCSH-GQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKTV 121
L CY+CK+ +E C +NC+ G+ C T GLLT S C+ +C ++
Sbjct: 21 LLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRA---VGLLTVISKGCSLNCVDDSQDY 77
Query: 122 EGTQVTMTCCQSSLCN 137
+ +TCC + LCN
Sbjct: 78 YVGKKNITCCDTDLCN 93
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 42.0 bits (97), Expect = 3e-04
Identities = 37/124 (29%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 63 LRCYTCKSLPRDERCNLTQNCSHGQT-CTTLIAHGNTESGLLTTHSTWCTDSCQPITKTV 121
L C++C + + C CS C T+ A G L T + +C P
Sbjct: 21 LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGI--GNLVTFGHSLSKTCSPACPIP 78
Query: 122 EGTQVTM-----TCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGSSETVGAALLLNLLAGL 176
EG V + +CCQS LCN GG R S +GA LLL+LL L
Sbjct: 79 EGVNVGVASMGISCCQSFLCNF------------SAADGGLRASVTLLGAGLLLSLLPAL 126
Query: 177 GAMG 180
G
Sbjct: 127 LRFG 130
>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 42.0 bits (97), Expect = 3e-04
Identities = 37/124 (29%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 63 LRCYTCKSLPRDERCNLTQNCSHGQT-CTTLIAHGNTESGLLTTHSTWCTDSCQPITKTV 121
L C++C + + C CS C T+ A G L T + +C P
Sbjct: 21 LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGI--GNLVTFGHSLSKTCSPACPIP 78
Query: 122 EGTQVTM-----TCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGSSETVGAALLLNLLAGL 176
EG V + +CCQS LCN GG R S +GA LLL+LL L
Sbjct: 79 EGVNVGVASMGISCCQSFLCNF------------SAADGGLRASVTLLGAGLLLSLLPAL 126
Query: 177 GAMG 180
G
Sbjct: 127 LRFG 130
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 41.2 bits (95), Expect = 5e-04
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G+ ++EEEEEDE+ +D +EE+E+E EEEE
Sbjct: 731 GKEEEEEEEEDEEEEEEDEEEEEEEEEEEEE 761
Score = 38.5 bits (88), Expect = 0.003
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRD 74
G+ + +++EEEE+ED ++ +EE+E+E EEEE + L +S
Sbjct: 731 GKEEEEEEEEDEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSS 790
Query: 75 ERCNLTQNCSHGQTCTTLIAHGNTES 100
E + + S +TL+A ES
Sbjct: 791 EGSERSTDRSQEGAPSTLLADDQKES 816
Score = 34.3 bits (77), Expect = 0.062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
P + Q +EEEE+E+ ++ +E++E+E EEEE
Sbjct: 724 PVQPQANGKEEEEEEEEDEEEEEEDEEEEEEEEE 757
>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
Length = 560
Score = 41.2 bits (95), Expect = 5e-04
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 16 RPGRGQTQ-QEEEEEDEDHGPDDYDEEDEDEVEE-EETNRLPGGRSRVLLR 64
R +G + QE +EEDE+ DD D+E ED+ EE EETNR G+++ +R
Sbjct: 132 RESKGSSNIQETDEEDEEEEDDDDDDEGEDDGEESEETNREEEGKAKEQIR 182
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 40.0 bits (92), Expect = 0.001
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEE 49
G+ ++EEEEEDE+ DD D+E EDE EEE
Sbjct: 66 GEEEEEEEEEDEEEEEDDDDDELEDEGEEE 95
Score = 35.0 bits (79), Expect = 0.036
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
++EEEEE+ED ++ D++DE E E EE +P S
Sbjct: 67 EEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENS 103
Score = 30.0 bits (66), Expect = 1.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETN 52
+ ++E+EEE+ED D+ ++E E+E N
Sbjct: 71 EEEEEDEEEEEDDDDDELEDEGEEEASMPNEN 102
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 40.0 bits (92), Expect = 0.001
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEE 49
G+ ++EEEEEDE+ DD D+E EDE EEE
Sbjct: 267 GEEEEEEEEEDEEEEEDDDDDELEDEGEEE 296
Score = 35.0 bits (79), Expect = 0.036
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
++EEEEE+ED ++ D++DE E E EE +P S
Sbjct: 268 EEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENS 304
Score = 30.0 bits (66), Expect = 1.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETN 52
+ ++E+EEE+ED D+ ++E E+E N
Sbjct: 272 EEEEEDEEEEEDDDDDELEDEGEEEASMPNEN 303
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 40.0 bits (92), Expect = 0.001
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEE 49
G+ ++EEEEEDE+ DD D+E EDE EEE
Sbjct: 267 GEEEEEEEEEDEEEEEDDDDDELEDEGEEE 296
Score = 35.0 bits (79), Expect = 0.036
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
++EEEEE+ED ++ D++DE E E EE +P S
Sbjct: 268 EEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENS 304
Score = 30.0 bits (66), Expect = 1.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETN 52
+ ++E+EEE+ED D+ ++E E+E N
Sbjct: 272 EEEEEDEEEEEDDDDDELEDEGEEEASMPNEN 303
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 40.0 bits (92), Expect = 0.001
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
PG G +E+++ED+D DD DEEDE+E EEEE
Sbjct: 129 PG-GDGGEEDDKEDDDDDEDDDDEEDEEEEEEEE 161
Score = 35.8 bits (81), Expect = 0.021
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G G + ++E++D+D DD ++E+E+E EEE+
Sbjct: 131 GDGGEEDDKEDDDDDEDDDDEEDEEEEEEEEED 163
Score = 33.1 bits (74), Expect = 0.14
Identities = 13/44 (29%), Positives = 29/44 (65%)
Query: 7 VLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
V L ++ G G + +E++++DED ++ +EE+E+E E+++
Sbjct: 122 VCLEIMEPGGDGGEEDDKEDDDDDEDDDDEEDEEEEEEEEEDDD 165
Score = 30.4 bits (67), Expect = 0.90
Identities = 9/29 (31%), Positives = 23/29 (79%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEET 51
+ ++++ED+D D+ +EE+E+E ++++T
Sbjct: 140 EDDDDDEDDDDEEDEEEEEEEEEDDDDDT 168
Score = 28.9 bits (63), Expect = 2.6
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRD 74
+ ++EEEE+D+D D D+E+ + ++ ++ P + + Y+ PRD
Sbjct: 155 EEEEEEEEDDDDDTEDFADQENLPDPQDISCHQSPSKTDHLTEKAYS--DTPRD 206
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 25 EEEEEDEDHGPDDYDEEDEDEVEEE 49
EE+EE+E+ +D D++ ED ++E
Sbjct: 151 EEDEEEEEEEEEDDDDDTEDFADQE 175
Score = 26.9 bits (58), Expect = 9.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEE+ED D D D++ + + +
Sbjct: 152 EDEEEEEEEEEDDDDDTEDFADQENLPDPQ 181
>gi|9955933 acrosomal vesicle protein 1 isoform e precursor [Homo
sapiens]
Length = 176
Score = 39.7 bits (91), Expect = 0.001
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 4/117 (3%)
Query: 22 TQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDERCNLTQ 81
++ E E+ D P E E+ + P G +L CYTC + +C +
Sbjct: 61 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG---TILNCYTCAYMNDQGKCLRGE 117
Query: 82 NCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKTVEGTQVTMTCCQS-SLCN 137
Q + E G L C + C + GT++ + CC++ S CN
Sbjct: 118 GTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCN 174
>gi|9955927 acrosomal vesicle protein 1 isoform b precursor [Homo
sapiens]
Length = 246
Score = 39.7 bits (91), Expect = 0.001
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 4/117 (3%)
Query: 22 TQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDERCNLTQ 81
++ E E+ D P E E+ + P G +L CYTC + +C +
Sbjct: 131 SELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSG---TILNCYTCAYMNDQGKCLRGE 187
Query: 82 NCSHGQTCTTLIAHGNTESGLLTTHSTWCTDSCQPITKTVEGTQVTMTCCQS-SLCN 137
Q + E G L C + C + GT++ + CC++ S CN
Sbjct: 188 GTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCN 244
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 38.9 bits (89), Expect = 0.003
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEE------TNRLPGGRSRVLLR 64
++++E+ED+D DD D++DED+ EEEE PG R + + +
Sbjct: 239 EEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAK 286
Score = 37.7 bits (86), Expect = 0.006
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 24 QEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+EE++EDED D+ DE+D+DE +EEE
Sbjct: 238 EEEDDEDEDDDDDEDDEDDDDEDDEEE 264
Score = 36.6 bits (83), Expect = 0.013
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 22 TQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
++ E++E+DED DD DEED+ E E ET G ++
Sbjct: 184 SEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKA 221
Score = 35.0 bits (79), Expect = 0.036
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEE 49
+ +EEED+D D+ D+EDEDE E+E
Sbjct: 143 EDSDEEEDDDSEEDEEDDEDEDEDEDE 169
Score = 32.3 bits (72), Expect = 0.24
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEE 49
G+ + + EEE++D + +D ++EDEDE E E
Sbjct: 137 GKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIE 171
Score = 31.2 bits (69), Expect = 0.53
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
++E+ +E+ED ++ +E+DEDE E+E+
Sbjct: 141 KKEDSDEEEDDDSEEDEEDDEDEDEDED 168
Score = 31.2 bits (69), Expect = 0.53
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 24 QEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDE 75
++E++ED++ DD D+E++D EE G+ + K++ DE
Sbjct: 185 EDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDE 236
Score = 28.9 bits (63), Expect = 2.6
Identities = 9/31 (29%), Positives = 22/31 (70%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G+ ++E+ ++E+ + DEED+++ +E+E
Sbjct: 137 GKNAKKEDSDEEEDDDSEEDEEDDEDEDEDE 167
Score = 28.1 bits (61), Expect = 4.5
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 25 EEEEEDEDHGPDDYDEEDEDEVEEEETNRL 54
++E+ DE+ D ++E++DE E+E+ + +
Sbjct: 141 KKEDSDEEEDDDSEEDEEDDEDEDEDEDEI 170
Score = 27.3 bits (59), Expect = 7.6
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 11/41 (26%)
Query: 21 QTQQEEEEEDEDH-----------GPDDYDEEDEDEVEEEE 50
+ E+E+EDED P DE+DED+ ++E+
Sbjct: 157 EEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDED 197
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 38.9 bits (89), Expect = 0.003
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETN 52
+ + EEEEE+E+ +D +EE+E+E EEEE N
Sbjct: 1074 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEN 1105
Score = 36.6 bits (83), Expect = 0.013
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
++ +EEEEE+++ ++ +EE+EDE EEEE
Sbjct: 1067 ESSEEEEEEEDEEEEEEEEEEEEDEEEEEE 1096
Score = 36.6 bits (83), Expect = 0.013
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 22 TQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+++EEEEEDE+ ++ +EE+++E EEEE
Sbjct: 1069 SEEEEEEEDEEEEEEEEEEEEDEEEEEEE 1097
Score = 36.6 bits (83), Expect = 0.013
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++E+EEE+E+ ++ DEE+E+E EEEE
Sbjct: 1072 EEEEEDEEEEEEEEEEEEDEEEEEEEEEEE 1101
Score = 36.2 bits (82), Expect = 0.016
Identities = 14/28 (50%), Positives = 23/28 (82%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
++EEEE++E+ ++ +EEDE+E EEEE
Sbjct: 1071 EEEEEEDEEEEEEEEEEEEDEEEEEEEE 1098
Score = 35.8 bits (81), Expect = 0.021
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRV 61
+ +++EEEE+E+ ++ +EE+E+E EEEE + R+
Sbjct: 1073 EEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRL 1113
Score = 34.7 bits (78), Expect = 0.048
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 11 LLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
LL + + ++EE+EE+E+ ++ ++E+E+E EEEE
Sbjct: 1061 LLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEE 1100
Score = 31.6 bits (70), Expect = 0.40
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 7/38 (18%)
Query: 23 QQEEEEEDEDHGPDDYDEEDED-------EVEEEETNR 53
++EEEE++E +D+D +DED EVE+EE R
Sbjct: 1409 EEEEEEDEEPSHNEDHDADDEDDSHMESAEVEKEELPR 1446
Score = 30.4 bits (67), Expect = 0.90
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 19 RGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
RGQ + +E E+ ++ +EE+E+E EEEE
Sbjct: 1058 RGQLLELSKESSEEEEEEEDEEEEEEEEEEEE 1089
Score = 30.0 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 16 RPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+P + EEEEE+E+ ++ +EE+E+E EEEE
Sbjct: 1342 KPEDDLIKPEEEEEEEE---EEEEEEEEEEGEEEE 1373
Score = 29.6 bits (65), Expect = 1.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
P T E+ ED+ P++ +EE+E+E EEEE
Sbjct: 1332 PVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEE 1365
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 38.5 bits (88), Expect = 0.003
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDER 76
+ + EE+EEDE+ D+ DE++ED+ +EEE ++ L C P D+R
Sbjct: 323 EEENEEDEEDEEEEKDEEDEDEEDDEDEEEDGDDEQSHWQLFLAC-----CPEDQR 373
Score = 36.2 bits (82), Expect = 0.016
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
++EE EEDE+ ++ DEEDEDE ++E+
Sbjct: 322 EEEENEEDEEDEEEEKDEEDEDEEDDED 349
Score = 27.3 bits (59), Expect = 7.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 6/28 (21%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+++EEEE+E+ DEEDE+E ++EE
Sbjct: 319 KKKEEEENEE------DEEDEEEEKDEE 340
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 38.1 bits (87), Expect = 0.004
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLP 55
Q +Q+EEEE+E+ ++ +EE+E+E EEEE P
Sbjct: 1127 QQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEELPP 1161
Score = 37.4 bits (85), Expect = 0.007
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLP 55
Q Q+++EEE+E+ ++ +EE+E+E EEE LP
Sbjct: 1126 QQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEELP 1160
Score = 32.7 bits (73), Expect = 0.18
Identities = 12/35 (34%), Positives = 25/35 (71%)
Query: 16 RPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
R + Q QQ+++++ ++ ++ +EE+E+E EEEE
Sbjct: 1116 RAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEE 1150
>gi|4757900 calreticulin precursor [Homo sapiens]
Length = 417
Score = 37.7 bits (86), Expect = 0.006
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPG 56
++EE E+ ED D DEEDE++ EE+E +PG
Sbjct: 378 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPG 411
Score = 35.8 bits (81), Expect = 0.021
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ + E++E+DED D+ DEED++E EEE+
Sbjct: 379 EEEAEDKEDDEDKDEDEEDEEDKEEDEEED 408
Score = 30.8 bits (68), Expect = 0.69
Identities = 10/33 (30%), Positives = 24/33 (72%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNR 53
+ +++++ ++E+ D D+ED+DE EE+E ++
Sbjct: 369 EEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDK 401
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 37.7 bits (86), Expect = 0.006
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEE+ED ++ +EE+E+E EEEE
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEE 292
Score = 37.7 bits (86), Expect = 0.006
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEEDE+ ++ +EE+E+E EEEE
Sbjct: 265 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEE 294
Score = 37.7 bits (86), Expect = 0.006
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLP 55
+ ++EEEEE+E+ ++ +EE+E+E EEEE P
Sbjct: 275 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAP 309
Score = 37.0 bits (84), Expect = 0.010
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ + EEEEE+E+ +D +EE+E+E EEEE
Sbjct: 258 EEEDEEEEEEEEEEEEDEEEEEEEEEEEEE 287
Score = 37.0 bits (84), Expect = 0.010
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ +EEEEE+E+ D+ +EE+E+E EEEE
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEE 288
Score = 36.2 bits (82), Expect = 0.016
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ ++ +EE+E+E EEEE
Sbjct: 260 EDEEEEEEEEEEEEDEEEEEEEEEEEEEEE 289
Score = 36.2 bits (82), Expect = 0.016
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ ++ +EE+E+E EEEE
Sbjct: 273 EDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Score = 35.8 bits (81), Expect = 0.021
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ ++ +EE+E+E EEEE
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEEEEEE 291
Score = 35.4 bits (80), Expect = 0.028
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ + EEEEE+E+ ++ +EE+E+E EEEE
Sbjct: 271 EEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Score = 35.4 bits (80), Expect = 0.028
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ +EEEEE+E+ ++ +EE+E+E EEEE
Sbjct: 272 EEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Score = 35.0 bits (79), Expect = 0.036
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEEE+++ ++ +EE+E+E EEEE
Sbjct: 264 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEE 293
Score = 35.0 bits (79), Expect = 0.036
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEEE++E+ ++ +EE+E+E EEEE
Sbjct: 266 EEEEEEEEDEEEEEEEEEEEEEEEEEEEEE 295
Score = 35.0 bits (79), Expect = 0.036
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EEE+E+E+ ++ +EE+E+E EEEE
Sbjct: 267 EEEEEEEDEEEEEEEEEEEEEEEEEEEEEE 296
Score = 35.0 bits (79), Expect = 0.036
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++EE+EE+E+ ++ +EE+E+E EEEE
Sbjct: 268 EEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297
Score = 35.0 bits (79), Expect = 0.036
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ ++E+EEE+E+ ++ +EE+E+E EEEE
Sbjct: 269 EEEEEDEEEEEEEEEEEEEEEEEEEEEEEE 298
Score = 35.0 bits (79), Expect = 0.036
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ +++EEEE+E+ ++ +EE+E+E EEEE
Sbjct: 270 EEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 299
Score = 33.5 bits (75), Expect = 0.11
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 19 RGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+G EEE+E+E+ ++ +E++E+E EEEE
Sbjct: 252 KGILSHEEEDEEEEEEEEEEEEDEEEEEEEEE 283
Score = 33.1 bits (74), Expect = 0.14
Identities = 12/29 (41%), Positives = 23/29 (79%)
Query: 22 TQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ +EE+EE+E+ ++ ++E+E+E EEEE
Sbjct: 256 SHEEEDEEEEEEEEEEEEDEEEEEEEEEE 284
Score = 29.6 bits (65), Expect = 1.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
+ ++EEEEE+E+ PD +ED ++ L G S
Sbjct: 295 EEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPES 333
Score = 27.7 bits (60), Expect = 5.8
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETN 52
+ ++EEEEE+E+ ++ +E D + +E+T+
Sbjct: 287 EEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTS 318
Score = 27.3 bits (59), Expect = 7.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 27 EEEDEDHGPDDYDEEDEDEVEEEE 50
EE + G ++EEDE+E EEEE
Sbjct: 246 EESSKQKGILSHEEEDEEEEEEEE 269
>gi|31543392 peroxisome proliferator-activated receptor gamma,
coactivator 1 beta [Homo sapiens]
Length = 1023
Score = 37.7 bits (86), Expect = 0.006
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
Query: 16 RPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGR 58
RP R Q Q+EE+EE+E+ +EE+E++ EEEE R GR
Sbjct: 422 RPARLQQQEEEDEEEEE------EEEEEEKEEEEEWGRKRPGR 458
>gi|51477718 TATA box binding protein-associated factor, RNA
polymerase II, Q [Homo sapiens]
Length = 462
Score = 37.7 bits (86), Expect = 0.006
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 19 RGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
R +E+E+DED D+ ++EDED+ EEEE
Sbjct: 329 RSNNDDDEDEDDEDEDEDEDEDEDEDKEEEEE 360
Score = 31.6 bits (70), Expect = 0.40
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 25 EEEEEDEDHGPDDYDEEDEDEVEEEETNR 53
E+E+EDED D+ EE+E++ EE R
Sbjct: 341 EDEDEDEDEDEDEDKEEEEEDCSEEYLER 369
Score = 27.7 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 19 RGQTQQEEEEEDEDHGPDDYDE-EDEDEVEEEE 50
R D+D DD DE EDEDE E+E+
Sbjct: 322 REMFSDSRSNNDDDEDEDDEDEDEDEDEDEDED 354
Score = 27.7 bits (60), Expect = 5.8
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEE 48
+ + E+E+EDED +D +EE+ED EE
Sbjct: 341 EDEDEDEDEDED---EDKEEEEEDCSEE 365
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 37.7 bits (86), Expect = 0.006
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G + ++E EEEDED D D EDE+E EEEE
Sbjct: 127 GDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEE 159
Score = 37.0 bits (84), Expect = 0.010
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 24 QEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+EE+E+D++ G D DEE+E+E EEEE
Sbjct: 136 EEEDEDDDEDGEDVEDEEEEEEEEEEE 162
Score = 31.6 bits (70), Expect = 0.40
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G ++ +E DED ++ D E+E+E+EEE+
Sbjct: 107 GEEYSEDNDEPGDEDEEDEEGDREEEEEIEEED 139
Score = 29.6 bits (65), Expect = 1.5
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 27 EEEDEDHGPDDYDEEDEDEVEE-EETNRLPG 56
+E D+ G +D DE++EDE EE E N PG
Sbjct: 88 DECDDSDGTEDMDEKEEDEGEEYSEDNDEPG 118
Score = 29.3 bits (64), Expect = 2.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEE 49
G ++EE+E E++ D+ + DEDE +EE
Sbjct: 95 GTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEE 126
Score = 28.9 bits (63), Expect = 2.6
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
+ + EE ED D P D DEEDE+ EEE
Sbjct: 104 EDEGEEYSEDNDE-PGDEDEEDEEGDREEE 132
Score = 28.1 bits (61), Expect = 4.5
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEED-------EDEVEEEE 50
PG + EE + +E+ ++ DE+D EDE EEEE
Sbjct: 117 PGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEE 157
Score = 27.3 bits (59), Expect = 7.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 20 GQTQQEEEEEDE-DHGPDDYDEEDEDEVEEEETNR 53
G +E+EEDE + +D DE +++ E+EE +R
Sbjct: 95 GTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDR 129
Score = 27.3 bits (59), Expect = 7.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEEEETN 52
+ ++EEEEE+EDH + ++ + E+++ N
Sbjct: 159 EEEEEEEEENEDHQMNCHNTRIMQDTEKDDNN 190
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 37.7 bits (86), Expect = 0.006
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G EEEEE+E P+ Y+EE+E+E EE+E
Sbjct: 166 GDEDDEEEEENEAGPPEGYEEEEEEEEEEDE 196
Score = 35.0 bits (79), Expect = 0.036
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDE 75
P G ++EEEEE+ED EDEDE E+E + L G V L Y K +DE
Sbjct: 180 PPEGYEEEEEEEEEED--------EDEDEDEDEAGSELGEGEEEVGL-SYLMKEEIQDE 229
Score = 30.8 bits (68), Expect = 0.69
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G +EE +++ED DDY EE E+E EEEE
Sbjct: 217 GLSYLMKEEIQDEEDD--DDYVEEGEEEEEEEE 247
Score = 29.3 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 6/32 (18%)
Query: 25 EEEEEDEDHGPDDYDEEDEDEV------EEEE 50
+ EEED++ G +D +EE+E+E EEEE
Sbjct: 157 DSEEEDDEDGDEDDEEEEENEAGPPEGYEEEE 188
Score = 28.1 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 24 QEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGG 57
QE+ E + DD D +++DE EEE P G
Sbjct: 150 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEG 183
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 37.7 bits (86), Expect = 0.006
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G EEEEE+E P+ Y+EE+E+E EE+E
Sbjct: 125 GDEDDEEEEENEAGPPEGYEEEEEEEEEEDE 155
Score = 35.0 bits (79), Expect = 0.036
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDE 75
P G ++EEEEE+ED EDEDE E+E + L G V L Y K +DE
Sbjct: 139 PPEGYEEEEEEEEEED--------EDEDEDEDEAGSELGEGEEEVGL-SYLMKEEIQDE 188
Score = 30.8 bits (68), Expect = 0.69
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G +EE +++ED DDY EE E+E EEEE
Sbjct: 176 GLSYLMKEEIQDEEDD--DDYVEEGEEEEEEEE 206
Score = 29.3 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 6/32 (18%)
Query: 25 EEEEEDEDHGPDDYDEEDEDEV------EEEE 50
+ EEED++ G +D +EE+E+E EEEE
Sbjct: 116 DSEEEDDEDGDEDDEEEEENEAGPPEGYEEEE 147
Score = 28.1 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 24 QEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGG 57
QE+ E + DD D +++DE EEE P G
Sbjct: 109 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEG 142
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 37.7 bits (86), Expect = 0.006
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 20 GQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G EEEEE+E P+ Y+EE+E+E EE+E
Sbjct: 118 GDEDDEEEEENEAGPPEGYEEEEEEEEEEDE 148
Score = 35.0 bits (79), Expect = 0.036
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 17 PGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRSRVLLRCYTCKSLPRDE 75
P G ++EEEEE+ED EDEDE E+E + L G V L Y K +DE
Sbjct: 132 PPEGYEEEEEEEEEED--------EDEDEDEDEAGSELGEGEEEVGL-SYLMKEEIQDE 181
Score = 30.8 bits (68), Expect = 0.69
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G +EE +++ED DDY EE E+E EEEE
Sbjct: 169 GLSYLMKEEIQDEEDD--DDYVEEGEEEEEEEE 199
Score = 29.3 bits (64), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 6/32 (18%)
Query: 25 EEEEEDEDHGPDDYDEEDEDEV------EEEE 50
+ EEED++ G +D +EE+E+E EEEE
Sbjct: 109 DSEEEDDEDGDEDDEEEEENEAGPPEGYEEEE 140
Score = 28.1 bits (61), Expect = 4.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 24 QEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGG 57
QE+ E + DD D +++DE EEE P G
Sbjct: 102 QEDNEAPDSEEEDDEDGDEDDEEEEENEAGPPEG 135
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 37.4 bits (85), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
G G ++EEEEE+E+ +E +E+E EEEE G S
Sbjct: 275 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 316
Score = 35.0 bits (79), Expect = 0.036
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G + ++EEEEE+E ++ +EE+E+E EEEE
Sbjct: 275 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 310
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 21 QTQQEEEEEDEDHGP--DDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ G ++ E+ +EV EEE
Sbjct: 300 EEEEEEEEEEEETGSNSEEASEQSAEEVSEEE 331
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 37.4 bits (85), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
G G ++EEEEE+E+ +E +E+E EEEE G S
Sbjct: 285 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 326
Score = 35.0 bits (79), Expect = 0.036
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G + ++EEEEE+E ++ +EE+E+E EEEE
Sbjct: 285 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 320
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 21 QTQQEEEEEDEDHGP--DDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ G ++ E+ +EV EEE
Sbjct: 310 EEEEEEEEEEEETGSNSEEASEQSAEEVSEEE 341
>gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens]
Length = 471
Score = 37.4 bits (85), Expect = 0.007
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 21 QTQQEEEEEDEDHGPDDYDEEDEDEVEE 48
+ ++EEEEEDED D DE DED+ EE
Sbjct: 425 EEEEEEEEEDEDDDSADMDESDEDDEEE 452
Score = 35.8 bits (81), Expect = 0.021
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 23 QQEEEEEDEDHGPDDYDEEDEDEVEEEETNR 53
++EEEEE+ED D D ++ DE +EEE R
Sbjct: 425 EEEEEEEEEDEDDDSADMDESDEDDEEERRR 455
Score = 33.5 bits (75), Expect = 0.11
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 7 VLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNR 53
V +A L G + ++EEEEE+E+ DD + DE + ++EE R
Sbjct: 408 VSIARLEMGPDEYEEMEEEEEEEEEEDEDDDSADMDESDEDDEEERR 454
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 37.4 bits (85), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
G G ++EEEEE+E+ +E +E+E EEEE G S
Sbjct: 276 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 317
Score = 35.0 bits (79), Expect = 0.036
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G + ++EEEEE+E ++ +EE+E+E EEEE
Sbjct: 276 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 311
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 21 QTQQEEEEEDEDHGP--DDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ G ++ E+ +EV EEE
Sbjct: 301 EEEEEEEEEEEETGSNSEEASEQSAEEVSEEE 332
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 37.4 bits (85), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
G G ++EEEEE+E+ +E +E+E EEEE G S
Sbjct: 285 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 326
Score = 35.0 bits (79), Expect = 0.036
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G + ++EEEEE+E ++ +EE+E+E EEEE
Sbjct: 285 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 320
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 21 QTQQEEEEEDEDHGP--DDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ G ++ E+ +EV EEE
Sbjct: 310 EEEEEEEEEEEETGSNSEEASEQSAEEVSEEE 341
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 37.4 bits (85), Expect = 0.007
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 18 GRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEETNRLPGGRS 59
G G ++EEEEE+E+ +E +E+E EEEE G S
Sbjct: 253 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNS 294
Score = 35.0 bits (79), Expect = 0.036
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 15 GRPGRGQTQQEEEEEDEDHGPDDYDEEDEDEVEEEE 50
G + ++EEEEE+E ++ +EE+E+E EEEE
Sbjct: 253 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEE 288
Score = 28.9 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 21 QTQQEEEEEDEDHGP--DDYDEEDEDEVEEEE 50
+ ++EEEEE+E+ G ++ E+ +EV EEE
Sbjct: 278 EEEEEEEEEEEETGSNSEEASEQSAEEVSEEE 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.131 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,021,592
Number of Sequences: 37866
Number of extensions: 498190
Number of successful extensions: 12382
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 4639
Number of HSP's gapped (non-prelim): 4295
length of query: 184
length of database: 18,247,518
effective HSP length: 96
effective length of query: 88
effective length of database: 14,612,382
effective search space: 1285889616
effective search space used: 1285889616
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.