SPTLC1 25258

Name: SPTLC1	Sequence: fasta or formatted (143aa)		NCBI GI: 30474871
Description: serine palmitoyltransferase subunit 1 isoform b		Referenced in: Sphingomyelin, Ceramides, and Glycolipids
Other entries for this name: alt prot [473aa] serine palmitoyltransferase subunit 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 11 3 C cysteine 1.4 2 1 D aspartate 2.1 3 1 E glutamate 9.1 13 2 F phenylalanine 4.2 6 1 G glycine 6.3 9 1 H histidine 2.1 3 1 I isoleucine 5.6 8 2 K lysine 7.0 10 2 L leucine 12.6 18 2 M methionine 1.4 2 1 N asparagine 4.2 6 1 P proline 7.7 11 2 Q glutamine 2.8 4 1 R arginine 2.8 4 1 S serine 4.2 6 1 T threonine 4.9 7 1 V valine 7.7 11 2 W tryptophan 2.1 3 1 Y tyrosine 4.2 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 serine palmitoyltransferase subunit 1 isoform b [Hom... SPTLC1 0.993 serine palmitoyltransferase subunit 1 isoform a [Homo... ALAS1 0.033 5-aminolevulinate synthase 1 ALAS1 0.033 5-aminolevulinate synthase 1 GCAT 0.033 glycine C-acetyltransferase precursor ZNF609 0.030 zinc finger protein 609 SPTLC2 0.026 serine palmitoyltransferase, long chain base subunit ... TRPM2 0.026 transient receptor potential cation channel, subfamil... PNN 0.022 pinin, desmosome associated protein ALAS2 0.019 5-aminolevulinate synthase 2 isoform c precursor [Ho... ALAS2 0.019 5-aminolevulinate synthase 2 isoform b precursor [Ho... ALAS2 0.019 5-aminolevulinate synthase 2 isoform a precursor [Ho... SLC4A7 0.015 solute carrier family 4, sodium bicarbonate cotrans... PGAM2 0.011 bisphosphoglycerate mutase 2 HEMGN 0.011 hemogen HEMGN 0.011 hemogen TFAP4 0.007 transcription factor AP-4 (activating enhancer bindin... SPTLC3 0.007 serine palmitoyltransferase, long chain base subuni... TEX15 0.007 testis expressed 15 ZC4H2 0.007 zinc finger, C4H2 domain containing CCDC85C 0.007 coiled-coil domain containing 85C CLCN1 0.007 chloride channel 1, skeletal muscle ALG11 0.007 asparagine-linked glycosylation 11 SULT2B1 0.007 sulfotransferase family, cytosolic, 2B, member 1 iso... SULT2B1 0.007 sulfotransferase family, cytosolic, 2B, member 1 iso... LONP2 0.007 peroxisomal LON protease-like URB1 0.007 nucleolar preribosomal-associated protein 1 LOC402573 0.007 hypothetical protein LOC402573 LOC65998 0.007 hypothetical protein LOC65998 CENPB 0.007 centromere protein B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.