Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GIYD2 Sequence: fasta or formatted (161aa) NCBI GI: 30089945
Description:

GIY-YIG domain containing 2 isoform 2

Referenced in:

Replication Proteins

Other entries for this name:
alt prot [275aa] GIY-YIG domain containing 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         10           2
 C cysteine            5.6          9           2
 D aspartate           3.1          5           1
 E glutamate           9.9         16           2
 F phenylalanine       3.1          5           2
 G glycine            11.2         18           2
 H histidine           3.1          5           1
 I isoleucine          1.2          2           1
 K lysine              2.5          4           2
 L leucine            12.4         20           2
 M methionine          1.9          3           1
 N asparagine          1.9          3           1
 P proline             6.8         11           1
 Q glutamine           3.7          6           2
 R arginine            7.5         12           2
 S serine              3.1          5           2
 T threonine           3.7          6           1
 V valine              7.5         12           2
 W tryptophan          3.1          5           1
 Y tyrosine            2.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GIY-YIG domain containing 2 isoform 2 
GIYD1                 1.000   GIY-YIG domain containing 1 isoform 2 
GIYD1                 0.489   GIY-YIG domain containing 1 isoform 1 
GIYD2                 0.489   GIY-YIG domain containing 2 isoform 1 
FEZ2                  0.018   zygin 2 isoform 2 
FEZ2                  0.018   zygin 2 isoform 1 
PRSS22                0.015   protease, serine, 22 
LOC100290769          0.015   PREDICTED: hypothetical protein XP_002346861 
LOC100287407          0.015   PREDICTED: hypothetical protein XP_002342704 
TWSG1                 0.015   twisted gastrulation 
LOC100130370          0.009   PREDICTED: similar to hCG1816473 
ZNF469                0.009   zinc finger protein 469 
DNLZ                  0.009   DNL-type zinc finger 
CD6                   0.009   CD6 molecule 
USP37                 0.009   ubiquitin specific peptidase 37 
ZNRF1                 0.009   zinc and ring finger protein 1 
ST18                  0.006   suppression of tumorigenicity 18 
LOC100130370          0.006   PREDICTED: similar to hCG1816473 
LOC100293457          0.006   PREDICTED: hypothetical protein 
LOC100130370          0.006   PREDICTED: similar to hCG1816473 
VWC2                  0.006   von Willebrand factor C domain containing 2 
TRAF2                 0.006   TNF receptor-associated factor 2 
LOC100293110          0.006   PREDICTED: hypothetical protein 
LOC100289572          0.006   PREDICTED: hypothetical protein 
LOC100289572          0.006   PREDICTED: hypothetical protein XP_002343123 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press