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Search of human proteins with 30023820
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30023820 hypothetical protein LOC162427 [Homo sapiens]
(466 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30023820 hypothetical protein LOC162427 [Homo sapiens] 941 0.0
gi|77917617 hypothetical protein LOC54463 isoform 1 [Homo sapiens] 255 5e-68
gi|187607445 hypothetical protein LOC79137 [Homo sapiens] 232 6e-61
gi|21361617 hypothetical protein LOC54463 isoform 2 [Homo sapiens] 223 2e-58
gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo s... 43 5e-04
gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo s... 43 5e-04
gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens] 37 0.050
gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens] 37 0.050
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 36 0.085
gi|4502081 amphiphysin isoform 1 [Homo sapiens] 35 0.11
gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens] 35 0.11
gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens] 35 0.11
gi|226437579 NAC alpha domain containing [Homo sapiens] 35 0.15
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.15
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.15
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.15
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 35 0.15
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 35 0.19
gi|41327683 cortistatin preproprotein [Homo sapiens] 35 0.19
gi|11056016 GC-rich promoter binding protein 1-like 1 [Homo sapi... 34 0.25
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens] 33 0.55
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 33 0.55
gi|21536423 amphiphysin isoform 2 [Homo sapiens] 33 0.55
gi|33946327 nucleoporin 214kDa [Homo sapiens] 33 0.72
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.72
gi|30911103 pygopus homolog 1 [Homo sapiens] 33 0.72
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 32 0.94
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 32 0.94
gi|14149793 glutamine rich 2 [Homo sapiens] 32 0.94
gi|28557798 family with sequence similarity 84, member B [Homo s... 32 1.2
>gi|30023820 hypothetical protein LOC162427 [Homo sapiens]
Length = 466
Score = 941 bits (2432), Expect = 0.0
Identities = 466/466 (100%), Positives = 466/466 (100%)
Query: 1 MAEAEGVPTTPGPASGSTFRGRRDVSGSWERDQQVEAAQRALVEVLGPYEPLLSRVQAAL 60
MAEAEGVPTTPGPASGSTFRGRRDVSGSWERDQQVEAAQRALVEVLGPYEPLLSRVQAAL
Sbjct: 1 MAEAEGVPTTPGPASGSTFRGRRDVSGSWERDQQVEAAQRALVEVLGPYEPLLSRVQAAL 60
Query: 61 VWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNKIWPEIKVPRPD 120
VWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNKIWPEIKVPRPD
Sbjct: 61 VWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNKIWPEIKVPRPD 120
Query: 121 ALDNESWGFVHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQNPGKFCLLSCGILTFL 180
ALDNESWGFVHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQNPGKFCLLSCGILTFL
Sbjct: 121 ALDNESWGFVHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQNPGKFCLLSCGILTFL 180
Query: 181 AVLGRYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQRLDFSVRGYMMSKQRE 240
AVLGRYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQRLDFSVRGYMMSKQRE
Sbjct: 181 AVLGRYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQRLDFSVRGYMMSKQRE 240
Query: 241 RQLRRRALHPERAMDNHSDSEEELAAFCPQLDDSTVARELAITDSEHSDAEVSCTDNGTF 300
RQLRRRALHPERAMDNHSDSEEELAAFCPQLDDSTVARELAITDSEHSDAEVSCTDNGTF
Sbjct: 241 RQLRRRALHPERAMDNHSDSEEELAAFCPQLDDSTVARELAITDSEHSDAEVSCTDNGTF 300
Query: 301 NLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRS 360
NLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRS
Sbjct: 301 NLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRS 360
Query: 361 PPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSG 420
PPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSG
Sbjct: 361 PPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSG 420
Query: 421 APAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLDPASSRSH 466
APAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLDPASSRSH
Sbjct: 421 APAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLDPASSRSH 466
>gi|77917617 hypothetical protein LOC54463 isoform 1 [Homo sapiens]
Length = 497
Score = 255 bits (652), Expect = 5e-68
Identities = 170/470 (36%), Positives = 260/470 (55%), Gaps = 33/470 (7%)
Query: 2 AEAEGVPTTPGPASGSTFRGRRDV----SGSWERD--QQVEAAQRALVEV---LGPYEPL 52
AE + P+ P P + R +++ +G+ E Q EAA RA V LG EP+
Sbjct: 19 AEEQAPPSPPPPQASPAERQQQEEEAQEAGAAEGAGLQVEEAAGRAAAAVTWLLG--EPV 76
Query: 53 L---SRVQAALVWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKNK 109
L R L W+RP RS L + N FWF ALT R+ L++ ++ V + K+
Sbjct: 77 LWLGCRADELLSWKRPLRSLLGFVAANLLFWFLALTPWRVYHLISVMILGRVIMQIIKDM 136
Query: 110 IWPEIKVPRPDALDNESWGFVHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQNPGKF 169
+ + + +ESW ++ + P L H +AE W++ +IF++ + LFK+Q+PGKF
Sbjct: 137 VLSRTRGAQLWRSLSESWEVINSKPDERPRLSHCIAESWMNFSIFLQEMSLFKQQSPGKF 196
Query: 170 CLLSCGILTFLAVLGRYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQRLDFS 229
CLL C + TF +LG Y+PG++LSYL+L+ + PL + + + Y ++K L +LDF
Sbjct: 197 CLLVCSVCTFFTILGSYIPGVILSYLLLLCAFLCPLFKCNDIGQKIYSKIKSVLLKLDFG 256
Query: 230 VRGYMMSKQRERQLRRRALHPERAMDNHSDSEEELAAFCPQLDDSTVARELAITDSEHSD 289
+ Y+ K+RER ++ + DSE + +A CP++ + A+EL+++D++ S
Sbjct: 257 IGEYINQKKRERS------EADKEKSHKDDSELDFSALCPKISLTVAAKELSVSDTDVS- 309
Query: 290 AEVSCTDNGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDT 349
EVS TDNGTFNLS G TP T+ S+DLD S EE F+RDL DFPS+ + G +DED+
Sbjct: 310 -EVSWTDNGTFNLSEGYTPQTDTSDDLDRPS--EEVFSRDLSDFPSLE-NGMGTNDEDEL 365
Query: 350 SIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLA 409
S+G+P+ + R + P AA LP+ S+ T +L S ++ +I A
Sbjct: 366 SLGLPTELKRKKEQLDSGHRPSKETQSAAGL-----TLPLNSDQTFHLMSNLAGDVITAA 420
Query: 410 LSGASQPGPSGAPAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLD 459
++ A + G Q+A P D DT+ EGDDFELLDQSEL Q++
Sbjct: 421 VTAAIKDQLEG--VQQALSQAAPIPEEDTDTE-EGDDFELLDQSELDQIE 467
>gi|187607445 hypothetical protein LOC79137 [Homo sapiens]
Length = 543
Score = 232 bits (591), Expect = 6e-61
Identities = 154/451 (34%), Positives = 231/451 (51%), Gaps = 49/451 (10%)
Query: 49 YEPLLSRVQAALVWERPARSALWCLGLNAAFWFFALTSLRLVFLLAFGLMIIVCIDQWKN 108
+E +L+ Q LVWE+P S + LN FW + +SLR FLL+ L+ +D W+
Sbjct: 63 WEAVLAAAQRLLVWEKPLHSLVTAAALNGLFWLLSSSSLRPFFLLSVSLLAYFLLDLWQP 122
Query: 109 KIWPEIKVPRPDALDNESWGF---VHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQN 165
+ P++ P+ ++S G P LLSVPELC ++AE W++ I ++ +L +K+QN
Sbjct: 123 RFLPDVSASSPEEPHSDSEGAGSGARPHLLSVPELCRYLAESWLTFQIHLQELLQYKRQN 182
Query: 166 PGKFCLLSCGILTFLAVLGRYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQR 225
P +FC+ C LAVLG YVPG+++SY++L+++++WPL VYH L R Y RL+P L +
Sbjct: 183 PAQFCVRVCSGCAVLAVLGHYVPGIMISYIVLLSILLWPLVVYHELIQRMYTRLEPLLMQ 242
Query: 226 LDFSVRGYMMSKQRERQLRRRALH------PERAMDNHSDSEEELAAFCPQLDDSTVARE 279
LD+S++ + + R+R E + S+SE ELA F P +D A
Sbjct: 243 LDYSMKAEANALHHKHDKRKRQGKNAPPGGDEPLAETESESEAELAGFSPVVDVKKTALA 302
Query: 280 LAITDSEHSDAEVSCTDNGTFNLSRGQTP-LTEGSEDLDGHS---DPEESFARDLPDFPS 335
LAITDSE SD E S ++G F++SR TP LT+ SEDLD S +PEE+ +RDL +
Sbjct: 303 LAITDSELSDEEASILESGGFSVSRATTPQLTDVSEDLDQQSLPSEPEETLSRDLGEGEE 362
Query: 336 INMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDE-----------------AA 378
+ P + +G P + R +EE + A+++ A
Sbjct: 363 GELAPP------EDLLGRPQALSRQALDSEEEEEDVAAKETLLRLSSPLHFVNTHFNGAG 416
Query: 379 LPELLLGALPVG-------SNLTSNLASLVSQGMIQLALSGASQPGPSGA---PAQRATR 428
P + P G ++ L +L L L G S P PS + P + +
Sbjct: 417 SPPDGVKCSPGGPVETLSPETVSGGLTALPGTLSPPLCLVG-SDPAPSPSILPPVPQDSP 475
Query: 429 GFLRSPSSDLDTDAEGDDFELLDQSELSQLD 459
L +P + E DFELLDQ EL QL+
Sbjct: 476 QPLPAPEEEEALTTE--DFELLDQGELEQLN 504
>gi|21361617 hypothetical protein LOC54463 isoform 2 [Homo sapiens]
Length = 356
Score = 223 bits (569), Expect = 2e-58
Identities = 130/335 (38%), Positives = 199/335 (59%), Gaps = 19/335 (5%)
Query: 125 ESWGFVHPRLLSVPELCHHVAEVWVSGTIFIRNVLLFKKQNPGKFCLLSCGILTFLAVLG 184
+SW ++ + P L H +AE W++ +IF++ + LFK+Q+PGKFCLL C + TF +LG
Sbjct: 11 KSWEVINSKPDERPRLSHCIAESWMNFSIFLQEMSLFKQQSPGKFCLLVCSVCTFFTILG 70
Query: 185 RYVPGLLLSYLMLVTVMMWPLAVYHRLWDRAYVRLKPALQRLDFSVRGYMMSKQRERQLR 244
Y+PG++LSYL+L+ + PL + + + Y ++K L +LDF + Y+ K+RER
Sbjct: 71 SYIPGVILSYLLLLCAFLCPLFKCNDIGQKIYSKIKSVLLKLDFGIGEYINQKKRERS-- 128
Query: 245 RRALHPERAMDNHSDSEEELAAFCPQLDDSTVARELAITDSEHSDAEVSCTDNGTFNLSR 304
++ + DSE + +A CP++ + A+EL+++D++ S EVS TDNGTFNLS
Sbjct: 129 ----EADKEKSHKDDSELDFSALCPKISLTVAAKELSVSDTDVS--EVSWTDNGTFNLSE 182
Query: 305 GQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGA 364
G TP T+ S+DLD S EE F+RDL DFPS+ + G +DED+ S+G+P+ + R
Sbjct: 183 GYTPQTDTSDDLDRPS--EEVFSRDLSDFPSLE-NGMGTNDEDELSLGLPTELKRKKEQL 239
Query: 365 EEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSGAPAQ 424
+ P AA LP+ S+ T +L S ++ +I A++ A + G Q
Sbjct: 240 DSGHRPSKETQSAAGL-----TLPLNSDQTFHLMSNLAGDVITAAVTAAIKDQLEG--VQ 292
Query: 425 RATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLD 459
+A P D DT+ EGDDFELLDQSEL Q++
Sbjct: 293 QALSQAAPIPEEDTDTE-EGDDFELLDQSELDQIE 326
>gi|73486666 alpha 1 type IX collagen isoform 1 precursor [Homo
sapiens]
Length = 921
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/163 (28%), Positives = 63/163 (38%), Gaps = 30/163 (18%)
Query: 308 PLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSI-GMPSLMYRS------ 360
P T+G G P ++ + LP P I ++ T G P M S
Sbjct: 552 PGTKGEPGKPG--PPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQ 609
Query: 361 -PPGAEEPQAP---PASRDEAALPELLLGALPVGS-NLTSNLASLVSQGMIQLALSGASQ 415
PPG P+ P P SR E PVGS L L SL S G+ L
Sbjct: 610 GPPGEVGPRGPQGLPGSRGELG---------PVGSPGLPGKLGSLGSPGLPGL------- 653
Query: 416 PGPSGAPAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQL 458
PGP G P + RG + P + A G++ E ++ EL +
Sbjct: 654 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDI 696
>gi|73486664 alpha 1 type IX collagen isoform 2 precursor [Homo
sapiens]
Length = 678
Score = 43.1 bits (100), Expect = 5e-04
Identities = 47/163 (28%), Positives = 63/163 (38%), Gaps = 30/163 (18%)
Query: 308 PLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSI-GMPSLMYRS------ 360
P T+G G P ++ + LP P I ++ T G P M S
Sbjct: 309 PGTKGEPGKPG--PPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQMGNSGKPGQQ 366
Query: 361 -PPGAEEPQAP---PASRDEAALPELLLGALPVGS-NLTSNLASLVSQGMIQLALSGASQ 415
PPG P+ P P SR E PVGS L L SL S G+ L
Sbjct: 367 GPPGEVGPRGPQGLPGSRGELG---------PVGSPGLPGKLGSLGSPGLPGL------- 410
Query: 416 PGPSGAPAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQL 458
PGP G P + RG + P + A G++ E ++ EL +
Sbjct: 411 PGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDI 453
>gi|30023847 LIM homeobox protein 3 isoform a [Homo sapiens]
Length = 397
Score = 36.6 bits (83), Expect = 0.050
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 39/186 (20%)
Query: 281 AITDSEHSDAEVSCTDNGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDP 340
++ + + SDAEVS D + G GS +P ++ R + +++
Sbjct: 244 SVQEGQDSDAEVSFPDEPSL-AEMGPANGLYGSL-----GEPTQALGRPSGALGNFSLEH 297
Query: 341 AGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASR---DEAALPELLLGALPVGSNLTSNL 397
GL + P Y PP PQ+ P + P+ LG +P G+
Sbjct: 298 GGLAGPEQYRELRPGSPYGVPPSPAAPQSLPGPQPLLSSLVYPDTSLGLVPSGA------ 351
Query: 398 ASLVSQGMIQLALSGASQPGPSGAPAQRATRGFLRSPSSDLDTDAEG--DDFELLDQSEL 455
P G P R G PSSDL T + G DF S L
Sbjct: 352 --------------------PGGPPPMRVLAG--NGPSSDLSTGSSGGYPDFPASPASWL 389
Query: 456 SQLDPA 461
++D A
Sbjct: 390 DEVDHA 395
>gi|7657303 LIM homeobox protein 3 isoform b [Homo sapiens]
Length = 402
Score = 36.6 bits (83), Expect = 0.050
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 39/186 (20%)
Query: 281 AITDSEHSDAEVSCTDNGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDP 340
++ + + SDAEVS D + G GS +P ++ R + +++
Sbjct: 249 SVQEGQDSDAEVSFPDEPSL-AEMGPANGLYGSL-----GEPTQALGRPSGALGNFSLEH 302
Query: 341 AGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASR---DEAALPELLLGALPVGSNLTSNL 397
GL + P Y PP PQ+ P + P+ LG +P G+
Sbjct: 303 GGLAGPEQYRELRPGSPYGVPPSPAAPQSLPGPQPLLSSLVYPDTSLGLVPSGA------ 356
Query: 398 ASLVSQGMIQLALSGASQPGPSGAPAQRATRGFLRSPSSDLDTDAEG--DDFELLDQSEL 455
P G P R G PSSDL T + G DF S L
Sbjct: 357 --------------------PGGPPPMRVLAG--NGPSSDLSTGSSGGYPDFPASPASWL 394
Query: 456 SQLDPA 461
++D A
Sbjct: 395 DEVDHA 400
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 35.8 bits (81), Expect = 0.085
Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 18/132 (13%)
Query: 332 DFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLGALPVGS 391
DF S P + TS+ +P E PQ+PP ++ L PV S
Sbjct: 735 DFQSSLQSPVSICSSS-TSLSLPQSF------PESPQSPPEGPAQSPLQR------PVSS 781
Query: 392 NLTSNLASLVSQGMIQLALSGASQP-GPSGAPAQRATRGFLRSPSSDLDTDAEGDDFELL 450
+ LASL+ S S P GP+ +P Q F S SS L + F
Sbjct: 782 FFSYTLASLLQSSHE----SPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSS 837
Query: 451 DQSELSQLDPAS 462
S LS+ P S
Sbjct: 838 TSSSLSKSSPES 849
>gi|4502081 amphiphysin isoform 1 [Homo sapiens]
Length = 695
Score = 35.4 bits (80), Expect = 0.11
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 27/222 (12%)
Query: 254 MDNHSDSEEELAAFCPQLD-DSTVARELAITDS---EHSDAEVSCTDNG---TFNLSRGQ 306
MD ++ E A P D D+ V ++ + E ++AE + G + ++
Sbjct: 454 MDTRAEEPVEEAVIIPGADADAAVGTLVSAAEGAPGEEAEAEKATVPAGEGVSLEEAKIG 513
Query: 307 TPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDED---DTSIGMPSLMYRSPPG 363
T TEG+E ++ E+ PS+ ++PA +E+ + +IG P
Sbjct: 514 TETTEGAESAQPEAEELEATVPQEKVIPSVVIEPASNHEEEGENEITIG------AEPKE 567
Query: 364 AEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSGAPA 423
E APP E PEL P+ + A A+ A Q + +
Sbjct: 568 TTEDAAPPGPTSET--PELATEQKPIQDPQPTPSAP---------AMGAADQLASAREAS 616
Query: 424 QRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLDPASSRS 465
Q GFL + D +A D L + ++ + P+ S +
Sbjct: 617 QELPPGFLYKVETLHDFEAANSDELTLQRGDVVLVVPSDSEA 658
>gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens]
Length = 519
Score = 35.4 bits (80), Expect = 0.11
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 273 DSTVARELAITDSEHSDAEVSCTDNGTFNLSRGQTPLT-------EGSEDLDGHSDPEES 325
++T +ELA +SEH + T G P T EG E+ D D EE
Sbjct: 150 EATSGQELADLESEHDER----TQEARLPRRVGPPPETFPPPGEEEGEEEEDNDEDEEEM 205
Query: 326 FARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLG 385
L D + D E D +PS + +P E P AP A A+P L
Sbjct: 206 ----LSDASLWTYSSSPDDSEPDAPRLLPSPVTCTPKEGETPPAPAALSSPLAVPALSAS 261
Query: 386 AL 387
+L
Sbjct: 262 SL 263
>gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens]
Length = 524
Score = 35.4 bits (80), Expect = 0.11
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 273 DSTVARELAITDSEHSDAEVSCTDNGTFNLSRGQTPLT-------EGSEDLDGHSDPEES 325
++T +ELA +SEH + T G P T EG E+ D D EE
Sbjct: 155 EATSGQELADLESEHDER----TQEARLPRRVGPPPETFPPPGEEEGEEEEDNDEDEEEM 210
Query: 326 FARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLG 385
L D + D E D +PS + +P E P AP A A+P L
Sbjct: 211 ----LSDASLWTYSSSPDDSEPDAPRLLPSPVTCTPKEGETPPAPAALSSPLAVPALSAS 266
Query: 386 AL 387
+L
Sbjct: 267 SL 268
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 316 LDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRD 375
L G S PE P PS A LD ++S+G S + R P A P + P S+
Sbjct: 1129 LSGKSTPE-------PTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQ 1181
Query: 376 EAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQP-----GPS-GAPAQRATRG 429
P L LG++ + S L + + Q LA S P GP AP A
Sbjct: 1182 PE--PVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAA 1239
Query: 430 F--LRSPSSDLDTDAEGDDFE 448
L P+ L D + D E
Sbjct: 1240 LPPLEPPAPCLCQDPQEDSVE 1260
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 316 LDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRD 375
L G S PE P PS A LD ++S+G S + R P A P + P S+
Sbjct: 1089 LSGKSTPE-------PTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQ 1141
Query: 376 EAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQP-----GPS-GAPAQRATRG 429
P L LG++ + S L + + Q LA S P GP AP A
Sbjct: 1142 PE--PVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAA 1199
Query: 430 F--LRSPSSDLDTDAEGDDFE 448
L P+ L D + D E
Sbjct: 1200 LPPLEPPAPCLCQDPQEDSVE 1220
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 316 LDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRD 375
L G S PE P PS A LD ++S+G S + R P A P + P S+
Sbjct: 1089 LSGKSTPE-------PTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQ 1141
Query: 376 EAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQP-----GPS-GAPAQRATRG 429
P L LG++ + S L + + Q LA S P GP AP A
Sbjct: 1142 PE--PVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAA 1199
Query: 430 F--LRSPSSDLDTDAEGDDFE 448
L P+ L D + D E
Sbjct: 1200 LPPLEPPAPCLCQDPQEDSVE 1220
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 316 LDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRD 375
L G S PE P PS A LD ++S+G S + R P A P + P S+
Sbjct: 1129 LSGKSTPE-------PTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQ 1181
Query: 376 EAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQP-----GPS-GAPAQRATRG 429
P L LG++ + S L + + Q LA S P GP AP A
Sbjct: 1182 PE--PVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAA 1239
Query: 430 F--LRSPSSDLDTDAEGDDFE 448
L P+ L D + D E
Sbjct: 1240 LPPLEPPAPCLCQDPQEDSVE 1260
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 35.0 bits (79), Expect = 0.15
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 316 LDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRD 375
L G S PE P PS A LD ++S+G S + R P A P + P S+
Sbjct: 1089 LSGKSTPE-------PTLPSAVATEASLDSCPESSVGAVSSLDRGCPDAPAPTSAPTSQQ 1141
Query: 376 EAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQP-----GPS-GAPAQRATRG 429
P L LG++ + S L + + Q LA S P GP AP A
Sbjct: 1142 PE--PVLGLGSVEQPHEVPSVLGTPLLQPPENLAKGQPSTPVDRPLGPDPSAPGTLAGAA 1199
Query: 430 F--LRSPSSDLDTDAEGDDFE 448
L P+ L D + D E
Sbjct: 1200 LPPLEPPAPCLCQDPQEDSVE 1220
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 34.7 bits (78), Expect = 0.19
Identities = 39/148 (26%), Positives = 54/148 (36%), Gaps = 23/148 (15%)
Query: 306 QTPLTEGSEDLDGHSDPEESFARDLPDFPSIN-----MDPAGLDDEDDTSIGMPSLMYRS 360
Q PL G + + P S PD P+ N G EDDT +
Sbjct: 2248 QRPLGSGDQGAEAEGPPAASLCA--PDGPAPNTVAQAQAADGAGPEDDTEASRAAAPAEG 2305
Query: 361 PPGAEEPQA----PPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQP 416
PPG +P+A P A +A E + +T N A +++ Q +
Sbjct: 2306 PPGGIQPEAAEPKPTAEAPKAPRVE------EIPQRMTRNRAQMLANQSKQGPPPSEKEC 2359
Query: 417 GPSGAPAQRA-TRGFLRSPSSDLDTDAE 443
P+ AP RA RG S D D A+
Sbjct: 2360 APTPAPVTRAKARG-----SEDDDAQAQ 2382
>gi|41327683 cortistatin preproprotein [Homo sapiens]
Length = 155
Score = 34.7 bits (78), Expect = 0.19
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 14/69 (20%)
Query: 370 PPASRDEAALPELLLGALP-------VGSNLTSNLASLVSQGMIQLALSGAS-------Q 415
PP+S++E +P+ L+ LP VG L S +S G++ L LSGA+ +
Sbjct: 15 PPSSKEETQVPKTLISGLPGRKSSSRVGEKLQSAHKMPLSPGLLLLLLSGATATAALPLE 74
Query: 416 PGPSGAPAQ 424
GP+G ++
Sbjct: 75 GGPTGRDSE 83
>gi|11056016 GC-rich promoter binding protein 1-like 1 [Homo
sapiens]
Length = 474
Score = 34.3 bits (77), Expect = 0.25
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 297 NGTFNLSRG----QTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIG 352
NG+F+ +G + P E E+ D E + DFPS+N + AG + IG
Sbjct: 121 NGSFHSRKGCAFQEKPPMEIREEKK--EDKVEKLQFEEEDFPSLNPE-AGKQHQPCRPIG 177
Query: 353 MPSLMYRSPPGAEEP 367
PS ++ +PP A++P
Sbjct: 178 TPSGVWENPPSAKQP 192
>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
Length = 533
Score = 33.1 bits (74), Expect = 0.55
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 26/156 (16%)
Query: 314 EDLDGHSDPE---ESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAP 370
E+ + H + SF D D+ S N D G DD D S P+ +P + P
Sbjct: 93 EETESHEEDNGGWSSFEED--DYESPNDDQDGEDDGDYES---PNEEEEAPVEDDADYEP 147
Query: 371 PASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSGAPAQRATRGF 430
P S DE AL +L A P ++ + I SG + P P QR
Sbjct: 148 PPSNDEEALQNSILPAKPFPNS---------NSMYIDRPPSGKTPQQPP-VPPQR----- 192
Query: 431 LRSPSSDLDTDAEGDDFELLDQSELSQLDPASSRSH 466
P + L G + L + + +P+ SR+H
Sbjct: 193 ---PMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNH 225
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.1 bits (74), Expect = 0.55
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 349 TSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASLVSQGMIQL 408
TS+G S R P A P++P +SR AA+P GA G+ T + V+
Sbjct: 161 TSLGAGSRALRRPGSAALPRSPSSSRRWAAMPG--PGAPRPGAPGTWPVGFAVAAPPAAA 218
Query: 409 ALSGASQPGPSGAPAQRATRGFLRSP 434
A P +GAPA A RG++ +P
Sbjct: 219 ASVAPPPPAVAGAPA-AAFRGWVAAP 243
>gi|21536423 amphiphysin isoform 2 [Homo sapiens]
Length = 653
Score = 33.1 bits (74), Expect = 0.55
Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 20/185 (10%)
Query: 284 DSEHSDAEVSCTDNGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGL 343
++E A V + + ++ T TEG+E ++ E+ PS+ ++PA
Sbjct: 449 EAEAEKATVPAGEGVSLEEAKIGTETTEGAESAQPEAEELEATVPQEKVIPSVVIEPASN 508
Query: 344 DDED---DTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLGALPVGSNLTSNLASL 400
+E+ + +IG P E APP E PEL P+ + A
Sbjct: 509 HEEEGENEITIG------AEPKETTEDAAPPGPTSET--PELATEQKPIQDPQPTPSAP- 559
Query: 401 VSQGMIQLALSGASQPGPSGAPAQRATRGFLRSPSSDLDTDAEGDDFELLDQSELSQLDP 460
A+ A Q + +Q GFL + D +A D L + ++ + P
Sbjct: 560 --------AMGAADQLASAREASQELPPGFLYKVETLHDFEAANSDELTLQRGDVVLVVP 611
Query: 461 ASSRS 465
+ S +
Sbjct: 612 SDSEA 616
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 32.7 bits (73), Expect = 0.72
Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 37/158 (23%)
Query: 298 GTFNLSRGQTPLTEGSEDLDG----HSDPEESFARDLP-DFPSINMDP------------ 340
G +LS G+T + GS+ + + P + A LP FP+++
Sbjct: 1428 GGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPM 1487
Query: 341 -AGLDDEDDTSIGMP------------SLMYRSPPGAEEPQAPPASRDEAALPELLLGAL 387
AG E+ TS +P + + A+ PQAPP + D +L
Sbjct: 1488 SAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPA 1547
Query: 388 PVGSNLTSNLASLVSQGMIQLALSGASQPGPSGAPAQR 425
S ++ SLV ALS + P +G P R
Sbjct: 1548 VSNSGTAASSTSLV-------ALSAEATPATTGVPDAR 1578
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 32.7 bits (73), Expect = 0.72
Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 19/169 (11%)
Query: 255 DNHSDSEEELAAFCPQLDDSTVARELAITDSEHSDAEVSCTDNGTFNLSRGQTPLTEGSE 314
D+ D E+E +D + E++ + E SD+ C+ + S G+ T SE
Sbjct: 980 DDEEDEEDEDRE--EAVDTTKKETEVSDGEDEESDSSSKCS---LYADSDGENDSTSDSE 1034
Query: 315 DLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTS-IGMPSLMYRSPPGAEEPQAPPAS 373
S S + S + + + D+E++ +PS SPP E P PA
Sbjct: 1035 SSSSSSSSSSSSSSSSSSSSSSSSESSSEDEEEEERPAALPSA---SPPPREVPVPTPAP 1091
Query: 374 RDEAALPELLLGALPVGSNLTSNLASLVSQGMIQLALSGASQPGPSGAP 422
E +PE + G S + L Q +G ++ P AP
Sbjct: 1092 V-EVPVPERVAG---------SPVTPLPEQEASPARPAGPTEESPPSAP 1130
>gi|30911103 pygopus homolog 1 [Homo sapiens]
Length = 419
Score = 32.7 bits (73), Expect = 0.72
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Query: 350 SIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLLGALP-VGSNLTSNLASLVSQGMIQL 408
++ MP+ +R P Q PP + + + P+L +P SN TS L S S
Sbjct: 168 NVNMPNQHFRQNPAENFSQIPPQNASQVSNPDLASNFVPGNNSNFTSPLESNHSFIPPPN 227
Query: 409 ALSGASQPGPSGAPAQRATRGFLRS-----PSSDLDTDAEGDDFELLDQSELSQLDPASS 463
A P P Q AT+ ++ P ++D + EL + + + ++ +S
Sbjct: 228 TFGQAKAPPPKQDFTQGATKNTNQNSSAHPPHLNMDDTVNQSNIELKNVNRNNAVNQENS 287
Query: 464 RS 465
RS
Sbjct: 288 RS 289
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 32.3 bits (72), Expect = 0.94
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 311 EGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAP 370
EG D + + EE D+P P ++ ++ED+ P + PP P P
Sbjct: 512 EGGGDEEEEPEEEEEEWGDVPLSPGAPLERPAEEEEDEEDGQEPGGLALPPPPPPPPPPP 571
Query: 371 PASRDE 376
P SR++
Sbjct: 572 PRSREQ 577
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 32.3 bits (72), Expect = 0.94
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 349 TSIGMPSLMYRSPPGAEEPQAPPASRDEAALPELLL-GALPVGSNLTSNLASLVSQGMIQ 407
T +GM + ++ + PA+ A P + L G+L +G+ S L + +
Sbjct: 1581 TVVGMSQMDSHKRKHEKQERGEPAAEGPAPGPPISLDGSLSLGAEPGSLLFLQSAAAGLG 1640
Query: 408 LALSGASQPGPSGAPAQRATRGFLRSPSSDLDTDAEGDDFEL 449
LAL A PGP A A G + ++ ++ E ++ EL
Sbjct: 1641 LALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEEL 1682
Score = 30.4 bits (67), Expect = 3.6
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 305 GQTPLTEGSEDLDGHSDPEESFARDLPDFPSINMDPAGLDDEDDTSIGMPSLMYRSPPGA 364
G P G++D ++ EES DL DF +++ + L + SL +
Sbjct: 704 GLPPSLLGAKD----TEHEESSNDDLVDFSALSSKNSSLSASPTSQQSSASLAAATAATE 759
Query: 365 EEPQA--PPASRDEAALPELLLGALPVGSNLTSN 396
P A PP S+ LP+ L G++P+ L+++
Sbjct: 760 AGPSATKPPNSKISGLLPQGLPGSIPLALALSNS 793
>gi|14149793 glutamine rich 2 [Homo sapiens]
Length = 1663
Score = 32.3 bits (72), Expect = 0.94
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 279 ELAITDSEHSDAEVSCTDNGTFNLSRGQTPLTEGSEDLDGHSDPEESFARDLPDFPSINM 338
E AITD + S T G F+ G T LT L G S + S + L +
Sbjct: 57 EQAITDGWRASQAGSETLMG-FSKHGGFTSLTSPEGTLSGDSTKQPSIEQALDSASGLGP 115
Query: 339 D--PAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPEL 382
D +G S G+ S P Q P +RDEA +P L
Sbjct: 116 DRTASGSGGTAHPSDGVSSREQSKVPSGTGRQQQPRARDEAGVPRL 161
>gi|28557798 family with sequence similarity 84, member B [Homo
sapiens]
Length = 310
Score = 32.0 bits (71), Expect = 1.2
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 339 DPAGLDDEDDTSIGMPSLMYRSPPGAEEPQAPPASRDEAALPE 381
DP G+D +D IG+ S ++ + EPQ PP D LP+
Sbjct: 20 DPTGVDRDDGPRIGV-SYIFSNDDEDVEPQPPPQGPDGGGLPD 61
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,875,213
Number of Sequences: 37866
Number of extensions: 991457
Number of successful extensions: 4561
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 4439
Number of HSP's gapped (non-prelim): 216
length of query: 466
length of database: 18,247,518
effective HSP length: 106
effective length of query: 360
effective length of database: 14,233,722
effective search space: 5124139920
effective search space used: 5124139920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.