Guide to the Human Genome
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Name: DUSP6 Sequence: fasta or formatted (381aa) NCBI GI: 42764683
Description:

dual specificity phosphatase 6 isoform a

Referenced in:

Dual-Specificity Phosphatases

Other entries for this name:
alt prot [235aa] dual specificity phosphatase 6 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         17           1
 C cysteine            2.4          9           1
 D aspartate           6.6         25           1
 E glutamate           6.3         24           2
 F phenylalanine       5.0         19           2
 G glycine             6.3         24           2
 H histidine           1.0          4           1
 I isoleucine          4.7         18           1
 K lysine              3.9         15           2
 L leucine            12.3         47           3
 M methionine          2.1          8           1
 N asparagine          6.3         24           1
 P proline             5.5         21           2
 Q glutamine           3.9         15           2
 R arginine            4.7         18           2
 S serine             11.3         43           4
 T threonine           4.5         17           2
 V valine              5.2         20           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dual specificity phosphatase 6 isoform a 
DUSP7                 0.687   dual specificity phosphatase 7 
DUSP9                 0.461   dual specificity phosphatase 9 
DUSP6                 0.330   dual specificity phosphatase 6 isoform b 
DUSP10                0.217   dual specificity phosphatase 10 isoform a 
DUSP16                0.199   dual specificity phosphatase 16 
DUSP4                 0.194   dual specificity phosphatase 4 isoform 1 
DUSP1                 0.190   dual specificity phosphatase 1 
DUSP8                 0.185   dual specificity phosphatase 8 
DUSP2                 0.178   dual specificity phosphatase 2 
DUSP5                 0.177   dual specificity phosphatase 5 
DUSP4                 0.160   dual specificity phosphatase 4 isoform 2 
DUSP10                0.132   dual specificity phosphatase 10 isoform b 
DUSP10                0.132   dual specificity phosphatase 10 isoform b 
SSH1                  0.101   slingshot 1 isoform 1 
SSH1                  0.101   slingshot 1 isoform 3 
SSH1                  0.101   slingshot 1 isoform 2 
DUSP22                0.097   dual specificity phosphatase 22 
SSH2                  0.096   slingshot 2 
DUSP19                0.094   dual specificity phosphatase 19 isoform 1 
DUSP14                0.088   dual specificity phosphatase 14 
DUSP3                 0.074   dual specificity phosphatase 3 
LOC100290651          0.073   PREDICTED: hypothetical protein XP_002347464 
STYX                  0.073   serine/threonine/tyrosine interacting protein [Homo...
STYX                  0.073   serine/threonine/tyrosine interacting protein 
DUSP15                0.069   dual specificity phosphatase 15 isoform a 
SSH3                  0.066   slingshot homolog 3 
DUSP12                0.059   dual specificity phosphatase 12 
DUSP18                0.059   dual specificity phosphatase 18 
DUSP26                0.059   dual specificity phosphatase 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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