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Search of human proteins with 29540559
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29540559 growth arrest-specific 2 [Homo sapiens]
(313 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219842340 growth arrest-specific 2 [Homo sapiens] 640 0.0
gi|29540559 growth arrest-specific 2 [Homo sapiens] 640 0.0
gi|4885253 growth arrest-specific 2 [Homo sapiens] 640 0.0
gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens] 342 2e-94
gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens] 199 3e-51
gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo sapi... 170 1e-42
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 170 1e-42
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 170 1e-42
gi|33188445 microfilament and actin filament cross-linker protei... 59 7e-09
gi|33188443 microfilament and actin filament cross-linker protei... 54 2e-07
gi|221316624 dystonin isoform 4 [Homo sapiens] 53 4e-07
gi|221316622 dystonin isoform 3 [Homo sapiens] 53 4e-07
gi|221316618 dystonin isoform 2 [Homo sapiens] 53 4e-07
gi|34577047 dystonin isoform 1 [Homo sapiens] 53 4e-07
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 53 4e-07
gi|163310745 LIM and calponin homology domains 1 isoform c [Homo... 39 0.008
gi|163310743 LIM and calponin homology domains 1 isoform b [Homo... 39 0.008
gi|163310741 LIM and calponin homology domains 1 isoform a [Homo... 39 0.008
gi|30181233 leucine-rich repeats and calponin homology (CH) doma... 38 0.013
gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens] 33 0.43
gi|22218339 hypothetical protein LOC90362 [Homo sapiens] 32 0.56
gi|4758018 calponin 2 isoform a [Homo sapiens] 32 0.73
gi|29029632 anaplastic lymphoma kinase [Homo sapiens] 31 1.2
gi|5729734 activator of S phase kinase [Homo sapiens] 30 2.1
gi|124028529 symplekin [Homo sapiens] 30 2.1
gi|41327730 calponin 2 isoform b [Homo sapiens] 30 2.1
gi|116812586 leucine zipper protein 5 [Homo sapiens] 30 3.6
gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo sap... 29 4.7
gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sap... 29 4.7
gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo sap... 29 4.7
>gi|219842340 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 640 bits (1650), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK 60
MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK
Sbjct: 1 MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK 60
Query: 61 LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC 120
LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC
Sbjct: 61 LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC 120
Query: 121 RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS 180
RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS
Sbjct: 121 RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS 180
Query: 181 APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI 240
APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI
Sbjct: 181 APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI 240
Query: 241 RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL 300
RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL
Sbjct: 241 RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL 300
Query: 301 VVSASYKAKKEIK 313
VVSASYKAKKEIK
Sbjct: 301 VVSASYKAKKEIK 313
>gi|29540559 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 640 bits (1650), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK 60
MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK
Sbjct: 1 MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK 60
Query: 61 LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC 120
LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC
Sbjct: 61 LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC 120
Query: 121 RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS 180
RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS
Sbjct: 121 RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS 180
Query: 181 APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI 240
APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI
Sbjct: 181 APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI 240
Query: 241 RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL 300
RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL
Sbjct: 241 RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL 300
Query: 301 VVSASYKAKKEIK 313
VVSASYKAKKEIK
Sbjct: 301 VVSASYKAKKEIK 313
>gi|4885253 growth arrest-specific 2 [Homo sapiens]
Length = 313
Score = 640 bits (1650), Expect = 0.0
Identities = 313/313 (100%), Positives = 313/313 (100%)
Query: 1 MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK 60
MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK
Sbjct: 1 MCTALSPKVRSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEK 60
Query: 61 LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC 120
LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC
Sbjct: 61 LDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWC 120
Query: 121 RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS 180
RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS
Sbjct: 121 RDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLS 180
Query: 181 APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI 240
APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI
Sbjct: 181 APSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFI 240
Query: 241 RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL 300
RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL
Sbjct: 241 RMLHNKHVMVRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQSKSPTLKDMNPDNYL 300
Query: 301 VVSASYKAKKEIK 313
VVSASYKAKKEIK
Sbjct: 301 VVSASYKAKKEIK 313
>gi|28372563 growth arrest-specific 2 like 3 [Homo sapiens]
Length = 694
Score = 342 bits (878), Expect = 2e-94
Identities = 170/299 (56%), Positives = 215/299 (71%), Gaps = 15/299 (5%)
Query: 10 RSGPGLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQ 69
R GPGL+++ QY +W+A RHEA LLPM+EDL++WL+ LLG ++ AE +E+LDNG LLCQ
Sbjct: 24 RHGPGLANVCQYDEWIAVRHEATLLPMQEDLSIWLSGLLGIKVKAEKLLEELDNGVLLCQ 83
Query: 70 LAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCRDLGVDETC 129
L + +Q K ++ + N P++K+PCK A SGSFFARDNTANFL WCRD+GVDET
Sbjct: 84 LIDVLQNMVKTCN--SEESGNFPMRKVPCKKDAASGSFFARDNTANFLHWCRDIGVDETY 141
Query: 130 LFESEGLVLHKQPREVCLCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSPSPSPS 189
LFESEGLVLHK PR+V LCLLE+GRI +RYGVEPP L+KLEKEIE EETL S P S
Sbjct: 142 LFESEGLVLHKDPRQVYLCLLEIGRIVSRYGVEPPVLVKLEKEIELEETLLNTS-GPEDS 200
Query: 190 SKSSGKKSTGNLLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEKILFIRMLHNKHVM 249
L +AVK I+EDPPC C ++F +E LS+GRYR+G+KILFIRMLH KHVM
Sbjct: 201 ISIPKSCCRHEELHEAVKHIAEDPPCSCSHRFSIEYLSEGRYRLGDKILFIRMLHGKHVM 260
Query: 250 VRVGGGWETFAGYLLKHDPCRMLQISRVDGKTSPIQ------------SKSPTLKDMNP 296
VRVGGGW+T G+LLK+DPCR+LQ + ++ K Q +++P +MNP
Sbjct: 261 VRVGGGWDTLQGFLLKYDPCRILQFATLEQKILAFQKGVSNESVPDSPARTPQPPEMNP 319
>gi|21281675 growth arrest-specific 2 like 2 [Homo sapiens]
Length = 880
Score = 199 bits (505), Expect = 3e-51
Identities = 112/258 (43%), Positives = 154/258 (59%), Gaps = 11/258 (4%)
Query: 30 EANLLPMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEK---FKESMDANK 86
E L MKEDLA WL +L G +I A F++ L+ G +LCQ A + + F A
Sbjct: 28 EQYLEAMKEDLAEWLRDLYGLDIDAANFLQVLETGLVLCQHANVVTDAALAFLAEAPAQA 87
Query: 87 PTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREV 145
+P + C +A G+F ARDN +NF+ WCR ++G+ E +FE+E LVL K + V
Sbjct: 88 QKIPMPRVGVSCNGAAQPGTFQARDNVSNFIQWCRKEMGIQEVLMFETEDLVLRKNVKNV 147
Query: 146 CLCLLELGRIAARYGVEPPGLIKLEKEIEQE--ETLSAPSPSPSPSSKSSGKKSTGNLLD 203
LCLLELGR A R+GV P L++LE+EIE+E L+ P P PSP + + LD
Sbjct: 148 VLCLLELGRRAWRFGVAAPTLVQLEEEIEEEVRRELALPPPDPSPPAPPRRQPCHFRNLD 207
Query: 204 DAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVMVRVGGGWETFAG 261
V+ + C CP +F + ++S+G+YRVG+ ++FIR+L N HVMVRVGGGW+T
Sbjct: 208 QMVQSLVSH--CTCPVQFSMVKVSEGKYRVGDSNTLIFIRILRN-HVMVRVGGGWDTLGH 264
Query: 262 YLLKHDPCRMLQISRVDG 279
YL KHDPCR +S G
Sbjct: 265 YLDKHDPCRCTSLSHKPG 282
>gi|23065529 growth arrest-specific 2 like 1 isoform b [Homo
sapiens]
Length = 337
Score = 170 bits (431), Expect = 1e-42
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%)
Query: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87
EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P
Sbjct: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81
Query: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146
+ + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V
Sbjct: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137
Query: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194
LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G
Sbjct: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197
Query: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249
+ T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM
Sbjct: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254
Query: 250 VRVGGGWETFAGYLLKHDPCR 270
VRVGGGW+T YL KHDPCR
Sbjct: 255 VRVGGGWDTLEHYLDKHDPCR 275
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 170 bits (431), Expect = 1e-42
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%)
Query: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87
EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P
Sbjct: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81
Query: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146
+ + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V
Sbjct: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137
Query: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194
LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G
Sbjct: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197
Query: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249
+ T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM
Sbjct: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254
Query: 250 VRVGGGWETFAGYLLKHDPCR 270
VRVGGGW+T YL KHDPCR
Sbjct: 255 VRVGGGWDTLEHYLDKHDPCR 275
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 170 bits (431), Expect = 1e-42
Identities = 105/261 (40%), Positives = 152/261 (58%), Gaps = 28/261 (10%)
Query: 30 EANLLPMKEDLALWLTNLLGKEITA--ETFMEKLDNGALLCQLAETMQEKFKESMDANKP 87
EA + MKEDLA WL L G + + F+ L G LCQ A + E + ++ A +P
Sbjct: 23 EAYVEAMKEDLAEWLNALYGLGLPGGGDGFLTGLATGTTLCQHANAVTEAAR-ALAAARP 81
Query: 88 TKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCR-DLGVDETCLFESEGLVLHKQPREVC 146
+ + + S GSF ARDN A F+ WCR +LGV E +FE+E LVL K + V
Sbjct: 82 ARGVAFQA----HSVVPGSFMARDNVATFIGWCRVELGVPEVLMFETEDLVLRKNEKSVV 137
Query: 147 LCLLELGRIAARYGVEPPGLIKLEKEIEQEETLSAPSP------------SPSPSSKSSG 194
LCLLE+ R AR G+ P L++ E+EIE+E + P+P +P+P + + G
Sbjct: 138 LCLLEVARRGARLGLLAPRLVQFEQEIERELRAAPPAPNAPAAGEDTTETAPAPGTPARG 197
Query: 195 KKSTGN---LLDDAVKRISEDPPCKCPNKFCVERLSQGRYRVGEK--ILFIRMLHNKHVM 249
+ T + LD+ V+ I C CP++F + ++S+G+YRVG+ ++F+R+L + HVM
Sbjct: 198 PRMTPSDLRNLDELVREIL--GRCTCPDQFPMIKVSEGKYRVGDSSLLIFVRVLRS-HVM 254
Query: 250 VRVGGGWETFAGYLLKHDPCR 270
VRVGGGW+T YL KHDPCR
Sbjct: 255 VRVGGGWDTLEHYLDKHDPCR 275
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 58.5 bits (140), Expect = 7e-09
Identities = 27/70 (38%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRVGE--KILFIRMLHNKHVMVRVGGGWETFA 260
D+ +++++ CKC +F VE++ + +YR G+ ++ +R+L + VMVRVGGGW
Sbjct: 5166 DEVTRQVAQ---CKCAKRFQVEQIGENKYRFGDSQQLRLVRILRST-VMVRVGGGWMALD 5221
Query: 261 GYLLKHDPCR 270
+L+K+DPCR
Sbjct: 5222 EFLVKNDPCR 5231
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 53.9 bits (128), Expect = 2e-07
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 12/76 (15%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRV--------GEKILFIRMLHNKHVMVRVGG 254
D+ +++++ CKC +F VE++ + +YR +++ +R+L + VMVRVGG
Sbjct: 5668 DEVTRQVAQ---CKCAKRFQVEQIGENKYRFFLGNQFGDSQQLRLVRILRST-VMVRVGG 5723
Query: 255 GWETFAGYLLKHDPCR 270
GW +L+K+DPCR
Sbjct: 5724 GWMALDEFLVKNDPCR 5739
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 52.8 bits (125), Expect = 4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRV--------GEKILFIRMLHNKHVMVRVGG 254
D+ +++++ CKC +F VE++ +YR +++ +R+L + VMVRVGG
Sbjct: 5223 DEVTRQVAK---CKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRST-VMVRVGG 5278
Query: 255 GWETFAGYLLKHDPCR 270
GW +L+K+DPCR
Sbjct: 5279 GWMALDEFLVKNDPCR 5294
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 52.8 bits (125), Expect = 4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRV--------GEKILFIRMLHNKHVMVRVGG 254
D+ +++++ CKC +F VE++ +YR +++ +R+L + VMVRVGG
Sbjct: 5234 DEVTRQVAK---CKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRST-VMVRVGG 5289
Query: 255 GWETFAGYLLKHDPCR 270
GW +L+K+DPCR
Sbjct: 5290 GWMALDEFLVKNDPCR 5305
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 52.8 bits (125), Expect = 4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRV--------GEKILFIRMLHNKHVMVRVGG 254
D+ +++++ CKC +F VE++ +YR +++ +R+L + VMVRVGG
Sbjct: 5372 DEVTRQVAK---CKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRST-VMVRVGG 5427
Query: 255 GWETFAGYLLKHDPCR 270
GW +L+K+DPCR
Sbjct: 5428 GWMALDEFLVKNDPCR 5443
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 52.8 bits (125), Expect = 4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRV--------GEKILFIRMLHNKHVMVRVGG 254
D+ +++++ CKC +F VE++ +YR +++ +R+L + VMVRVGG
Sbjct: 5194 DEVTRQVAK---CKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRST-VMVRVGG 5249
Query: 255 GWETFAGYLLKHDPCR 270
GW +L+K+DPCR
Sbjct: 5250 GWMALDEFLVKNDPCR 5265
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 52.8 bits (125), Expect = 4e-07
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 203 DDAVKRISEDPPCKCPNKFCVERLSQGRYRV--------GEKILFIRMLHNKHVMVRVGG 254
D+ +++++ CKC +F VE++ +YR +++ +R+L + VMVRVGG
Sbjct: 4868 DEVTRQVAK---CKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILRST-VMVRVGG 4923
Query: 255 GWETFAGYLLKHDPCR 270
GW +L+K+DPCR
Sbjct: 4924 GWMALDEFLVKNDPCR 4939
>gi|163310745 LIM and calponin homology domains 1 isoform c [Homo
sapiens]
Length = 1056
Score = 38.5 bits (88), Expect = 0.008
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 35 PMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDANKPTKNLPLK 94
P + W+ + G+ + F L+NG LLC+L ++A KP +
Sbjct: 22 PAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCEL-----------LNAIKPGLVKKIN 70
Query: 95 KIPCKTSAPSGSFFARDNTANFLSWCRDLGVDETCLFESEGL 136
++P + DN FL C++LG+ E+ LF+ L
Sbjct: 71 RLPTPIA-------GLDNIILFLRGCKELGLKESQLFDPSDL 105
>gi|163310743 LIM and calponin homology domains 1 isoform b [Homo
sapiens]
Length = 1057
Score = 38.5 bits (88), Expect = 0.008
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 35 PMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDANKPTKNLPLK 94
P + W+ + G+ + F L+NG LLC+L ++A KP +
Sbjct: 22 PAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCEL-----------LNAIKPGLVKKIN 70
Query: 95 KIPCKTSAPSGSFFARDNTANFLSWCRDLGVDETCLFESEGL 136
++P + DN FL C++LG+ E+ LF+ L
Sbjct: 71 RLPTPIA-------GLDNIILFLRGCKELGLKESQLFDPSDL 105
>gi|163310741 LIM and calponin homology domains 1 isoform a [Homo
sapiens]
Length = 1083
Score = 38.5 bits (88), Expect = 0.008
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 35 PMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDANKPTKNLPLK 94
P + W+ + G+ + F L+NG LLC+L ++A KP +
Sbjct: 22 PAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCEL-----------LNAIKPGLVKKIN 70
Query: 95 KIPCKTSAPSGSFFARDNTANFLSWCRDLGVDETCLFESEGL 136
++P + DN FL C++LG+ E+ LF+ L
Sbjct: 71 RLPTPIA-------GLDNIILFLRGCKELGLKESQLFDPSDL 105
>gi|30181233 leucine-rich repeats and calponin homology (CH) domain
containing 4 [Homo sapiens]
Length = 683
Score = 37.7 bits (86), Expect = 0.013
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 34 LPMKEDLALWLTNLLGKEITA---ETFMEKLDNGALLCQLAETMQEKFKESMDANKPTKN 90
+P ++DL L +L + E E L +G +LCQLA ++ + +
Sbjct: 534 VPDEKDLMTQLRQVLESRLQRPLPEDLAEALASGVILCQLANQLRPR------------S 581
Query: 91 LPLKKIPCKTSAPSGSFFARDNTANFLSWCRDLGVDETCLFESEGLV 137
+P +P + AR N +FL CR +GV E L L+
Sbjct: 582 VPFIHVPSPAVPKLSALKARKNVESFLEACRKMGVPEADLCSPSDLL 628
>gi|21361120 calponin 1, basic, smooth muscle [Homo sapiens]
Length = 297
Score = 32.7 bits (73), Expect = 0.43
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 19/124 (15%)
Query: 37 KEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDANKPTKNLPLKKI 96
+++L W+ + G+ I FM+ L +G +LC+ +Q + + N+ T+N
Sbjct: 31 EQELREWIEGVTGRRI-GNNFMDGLKDGIILCEFINKLQPGSVKKI--NESTQN------ 81
Query: 97 PCKTSAPSGSFFARDNTANFLSWCRDLGVDETCLFESEGLVLHKQPREVCLCLLELGRIA 156
+ +N NF+ GV +FE+ L + +V LL L +A
Sbjct: 82 ----------WHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMA 131
Query: 157 ARYG 160
G
Sbjct: 132 KTKG 135
>gi|22218339 hypothetical protein LOC90362 [Homo sapiens]
Length = 370
Score = 32.3 bits (72), Expect = 0.56
Identities = 18/38 (47%), Positives = 20/38 (52%)
Query: 66 LLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAP 103
LL Q AE+ S D K T PLK IPC +SAP
Sbjct: 185 LLEQSAESFLHVSHSSSDIRKVTSVKPLKAIPCSSSAP 222
>gi|4758018 calponin 2 isoform a [Homo sapiens]
Length = 309
Score = 32.0 bits (71), Expect = 0.73
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 6 SPKVRSGPGLSDMHQYSQWLASRHEANLLPMKE-DLALWLTNLLGKEITAETFMEKLDNG 64
S + GP + L S+++ P KE +L W+ L G I + F + L +G
Sbjct: 3 STQFNKGPSYGLSAEVKNRLLSKYD----PQKEAELRTWIEGLTGLSIGPD-FQKGLKDG 57
Query: 65 ALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCRDLG 124
+LC L +Q +P K + ++ +N +NF+ G
Sbjct: 58 TILCTLMNKLQPG-----------------SVP-KINRSMQNWHQLENLSNFIKAMVSYG 99
Query: 125 VDETCLFESEGLVLHKQPREVCLCLLELGRIAARYGVE 162
++ LFE+ L +V + LL L A G++
Sbjct: 100 MNPVDLFEANDLFESGNMTQVQVSLLALAGKAKTKGLQ 137
>gi|29029632 anaplastic lymphoma kinase [Homo sapiens]
Length = 1620
Score = 31.2 bits (69), Expect = 1.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 163 PPGLIKLEKEIEQEETLSAPSPSPSPSSKSSGKKSTGNLLDDAVKR 208
PP L+ + + E+E + +AP P P+ SS + KK T + V R
Sbjct: 1422 PPLLVSQQAKREEERSPAAPPPLPTTSSGKAAKKPTAAEISVRVPR 1467
>gi|5729734 activator of S phase kinase [Homo sapiens]
Length = 674
Score = 30.4 bits (67), Expect = 2.1
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 153 GRIAARYGVEPPGLIKLEKEIEQEETLSAPSPSPSPSSKSSGKKSTGNLLDDAVKRISED 212
GR+ + LI +KE + +TL SP PSP S + + ++ + D S D
Sbjct: 73 GRVEEFLSKDISYLISNKKEAKFAQTLGRISPVPSPESAYTAETTSPHPSHDGSSFKSPD 132
Query: 213 PPCKCPNKFCVER 225
C K VE+
Sbjct: 133 TVCLSRGKLLVEK 145
>gi|124028529 symplekin [Homo sapiens]
Length = 1274
Score = 30.4 bits (67), Expect = 2.1
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 169 LEKEIEQEETL--------SAPSPSPSPSSKSSGKKSTGNLLDDAVKRISEDPPCKCPNK 220
L++++E+E+ L S+ SPSPSPS++ S ++A+ E P C+ P
Sbjct: 1149 LKRQLEEEQKLKPGGVGAPSSSSPSPSPSARPGPPPS-----EEAMDFREEGPECETPGI 1203
Query: 221 F 221
F
Sbjct: 1204 F 1204
>gi|41327730 calponin 2 isoform b [Homo sapiens]
Length = 270
Score = 30.4 bits (67), Expect = 2.1
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 24/148 (16%)
Query: 6 SPKVRSGPGLSDMHQYSQWLASRHEANLLPMKE-DLALWLTNLLGKEITAETFMEKLDNG 64
S + GP + L S+++ P KE +L W+ L G I + F + L +G
Sbjct: 3 STQFNKGPSYGLSAEVKNRLLSKYD----PQKEAELRTWIEGLTGLSIGPD-FQKGLKDG 57
Query: 65 ALLCQLAETMQEKFKESMDANKPTKNLPLKKIPCKTSAPSGSFFARDNTANFLSWCRDLG 124
+LC L +Q +P K + ++ +N +NF+ G
Sbjct: 58 TILCTLMNKLQPG-----------------SVP-KINRSMQNWHQLENLSNFIKAMVSYG 99
Query: 125 VDETCLFESEGLVLHKQPREVCLCLLEL 152
++ LFE+ L +V + LL L
Sbjct: 100 MNPVDLFEANDLFESGNMTQVQVSLLAL 127
>gi|116812586 leucine zipper protein 5 [Homo sapiens]
Length = 1143
Score = 29.6 bits (65), Expect = 3.6
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 14 GLSDMHQYSQWLASRHEANLLPMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAET 73
GL D HQ+ L R + +K + L + KEIT + ++K D+ + L +T
Sbjct: 895 GLGD-HQFQMQLLQRSLGIMQTVKGFFYVSLLLDILKEITGSSLIQKTDSDEEVAMLLDT 953
Query: 74 MQEKFKESMD 83
+Q+ F++ ++
Sbjct: 954 VQKVFQKMLE 963
>gi|17865632 mitochondrial tumor suppressor 1 isoform 5 [Homo
sapiens]
Length = 436
Score = 29.3 bits (64), Expect = 4.7
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 25 LASRHEANLLPMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDA 84
L+ R EA L + L+ L NL G+ +TA T EKL+ +T+ E F + A
Sbjct: 110 LSEREEA--LKQHKTLSQELVNLRGELVTASTTCEKLEKAR---NELQTVYEAFVQQHQA 164
Query: 85 NKPTKNLPLKK 95
K + LK+
Sbjct: 165 EKTERENRLKE 175
>gi|50348611 mitochondrial tumor suppressor 1 isoform 1 [Homo sapiens]
Length = 1270
Score = 29.3 bits (64), Expect = 4.7
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 25 LASRHEANLLPMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDA 84
L+ R EA L + L+ L NL G+ +TA T EKL+ +T+ E F + A
Sbjct: 944 LSEREEA--LKQHKTLSQELVNLRGELVTASTTCEKLEKAR---NELQTVYEAFVQQHQA 998
Query: 85 NKPTKNLPLKK 95
K + LK+
Sbjct: 999 EKTERENRLKE 1009
>gi|50348617 mitochondrial tumor suppressor 1 isoform 2 [Homo
sapiens]
Length = 1216
Score = 29.3 bits (64), Expect = 4.7
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 25 LASRHEANLLPMKEDLALWLTNLLGKEITAETFMEKLDNGALLCQLAETMQEKFKESMDA 84
L+ R EA L + L+ L NL G+ +TA T EKL+ +T+ E F + A
Sbjct: 890 LSEREEA--LKQHKTLSQELVNLRGELVTASTTCEKLEKAR---NELQTVYEAFVQQHQA 944
Query: 85 NKPTKNLPLKK 95
K + LK+
Sbjct: 945 EKTERENRLKE 955
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,432,552
Number of Sequences: 37866
Number of extensions: 653177
Number of successful extensions: 3136
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3075
Number of HSP's gapped (non-prelim): 43
length of query: 313
length of database: 18,247,518
effective HSP length: 102
effective length of query: 211
effective length of database: 14,385,186
effective search space: 3035274246
effective search space used: 3035274246
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.