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Search of human proteins with 28557723
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28557723 hypothetical protein LOC283416 [Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28557723 hypothetical protein LOC283416 [Homo sapiens] 271 1e-73
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 4e-05
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 44 4e-05
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 44 4e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 4e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 43 6e-05
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 43 8e-05
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 43 8e-05
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 43 8e-05
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 43 8e-05
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 43 8e-05
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 43 8e-05
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 42 2e-04
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 42 2e-04
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 41 3e-04
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 41 3e-04
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 41 3e-04
gi|33286446 opioid growth factor receptor [Homo sapiens] 39 0.002
gi|148612882 cat eye syndrome chromosome region, candidate 2 [Ho... 38 0.002
gi|169171833 PREDICTED: hypothetical protein [Homo sapiens] 38 0.003
gi|110431370 espin [Homo sapiens] 38 0.003
gi|171906567 peripheral benzodiazepine receptor-associated prote... 38 0.003
gi|171906559 peripheral benzodiazepine receptor-associated prote... 38 0.003
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 37 0.003
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.004
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.004
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.004
gi|18079216 CASK interacting protein 1 [Homo sapiens] 37 0.006
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.006
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.006
>gi|28557723 hypothetical protein LOC283416 [Homo sapiens]
Length = 131
Score = 271 bits (692), Expect = 1e-73
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MGGKSAVRHQLVLDCPREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYP 60
MGGKSAVRHQLVLDCPREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYP
Sbjct: 1 MGGKSAVRHQLVLDCPREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYP 60
Query: 61 GPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSAL 120
GPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSAL
Sbjct: 61 GPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSAL 120
Query: 121 QEAKTEQTKTP 131
QEAKTEQTKTP
Sbjct: 121 QEAKTEQTKTP 131
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 4e-05
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 16 PREAASSAPALRPLGA--AATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAG 73
P A + APA P+ A AA A LAP PAP+P V P P P A PA
Sbjct: 141 PVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA 200
Query: 74 PLSAPIIAGGHPAEAAA--GSAKQQP 97
P AP A AE A G Q+P
Sbjct: 201 PAPAPDAAPQESAEQGANQGQRGQEP 226
Score = 30.0 bits (66), Expect = 0.54
Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 15/131 (11%)
Query: 12 VLDCPREAASSAPALRPLGAAATS--------RAAPLAPLPAPSPRWGLGCGRVRYPGPH 63
+L PR A + PL AA S P P+PAP+ P P
Sbjct: 91 LLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 150
Query: 64 PRRAVEPAAGPLSAPIIA-----GGHPAEAAAGSAKQQPRHS-REVPRP-PVPQHPSGNS 116
P P A P++ ++A PA A A A P + P P P P +
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Query: 117 RSALQEAKTEQ 127
SA Q A Q
Sbjct: 211 ESAEQGANQGQ 221
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 43.9 bits (102), Expect = 4e-05
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 16 PREAASSAPALRPLGA--AATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAG 73
P A + APA P+ A AA A LAP PAP+P V P P P A PA
Sbjct: 141 PVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA 200
Query: 74 PLSAPIIAGGHPAEAAA--GSAKQQP 97
P AP A AE A G Q+P
Sbjct: 201 PAPAPDAAPQESAEQGANQGQRGQEP 226
Score = 30.0 bits (66), Expect = 0.54
Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 15/131 (11%)
Query: 12 VLDCPREAASSAPALRPLGAAATS--------RAAPLAPLPAPSPRWGLGCGRVRYPGPH 63
+L PR A + PL AA S P P+PAP+ P P
Sbjct: 91 LLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 150
Query: 64 PRRAVEPAAGPLSAPIIA-----GGHPAEAAAGSAKQQPRHS-REVPRP-PVPQHPSGNS 116
P P A P++ ++A PA A A A P + P P P P +
Sbjct: 151 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 210
Query: 117 RSALQEAKTEQ 127
SA Q A Q
Sbjct: 211 ESAEQGANQGQ 221
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 43.9 bits (102), Expect = 4e-05
Identities = 34/86 (39%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 16 PREAASSAPALRPLGA--AATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAG 73
P A + APA P+ A AA A LAP PAP+P V P P P A PA
Sbjct: 152 PVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPA 211
Query: 74 PLSAPIIAGGHPAEAAA--GSAKQQP 97
P AP A AE A G Q+P
Sbjct: 212 PAPAPDAAPQESAEQGANQGQRGQEP 237
Score = 30.0 bits (66), Expect = 0.54
Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 15/131 (11%)
Query: 12 VLDCPREAASSAPALRPLGAAATS--------RAAPLAPLPAPSPRWGLGCGRVRYPGPH 63
+L PR A + PL AA S P P+PAP+ P P
Sbjct: 102 LLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPAPASTPPPVPVLAPAPAPA 161
Query: 64 PRRAVEPAAGPLSAPIIA-----GGHPAEAAAGSAKQQPRHS-REVPRP-PVPQHPSGNS 116
P P A P++ ++A PA A A A P + P P P P +
Sbjct: 162 PAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQ 221
Query: 117 RSALQEAKTEQ 127
SA Q A Q
Sbjct: 222 ESAEQGANQGQ 232
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 43.9 bits (102), Expect = 4e-05
Identities = 44/132 (33%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 1 MGGKSAVRHQLVLDCPREAASSAPAL-------RPLGAAATSRAAPL------APLPAPS 47
+ +A H L P A++A AL P GAA AAP AP P P+
Sbjct: 33 LAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPA 92
Query: 48 PRWGLGCGRVRYPG-PHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREV--- 103
R G G + PG P PRR + P AGP + P P E +AGS P +
Sbjct: 93 GRARPGGGGPQRPGPPSPRRPLVP-AGP-APPAAKLRPPPEGSAGSCAPVPAAAAVAAGP 150
Query: 104 -PRPPVPQHPSG 114
P P P P+G
Sbjct: 151 EPAPAGPAKPAG 162
Score = 43.5 bits (101), Expect = 5e-05
Identities = 40/134 (29%), Positives = 53/134 (39%), Gaps = 22/134 (16%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGP------------- 62
P ++APA+ P AA +A AP PAP+ G G PGP
Sbjct: 287 PAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA--GGPAGVSGQPGPGAAAAAPAPGVKA 344
Query: 63 -HPRRAVEPAAGPLSAPIIAGGHPAEAAA----GSAKQQPRHSREVPRPPVPQHPSGNSR 117
P+R V+ A P +A +A PA AA G Q S PP P P+G +
Sbjct: 345 ESPKRVVQ--AAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPK 402
Query: 118 SALQEAKTEQTKTP 131
A ++TP
Sbjct: 403 GAAGAVTQSLSRTP 416
Score = 37.7 bits (86), Expect = 0.003
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 19 AASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPL--- 75
A ++ P P G A + A LA P P G G G PGP P + P A
Sbjct: 145 AVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPG----PGPGPGKPAGPGAAQTLNG 200
Query: 76 SAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVP 109
SA ++ H A A P +P+P P
Sbjct: 201 SAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAP 234
Score = 29.3 bits (64), Expect = 0.92
Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 18/116 (15%)
Query: 19 AASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPLSAP 78
AA APA P AA + AAP A P P P P R PA P +AP
Sbjct: 247 AAPPAPAA-PSPPAAPAPAAPAAAPPPPPPA----------PATLARPPGHPAGPPTAAP 295
Query: 79 IIAGGHPAEAAA---GSAKQQPRHSREVPRPPVPQHPSGNSRSALQEAKTEQTKTP 131
+ P AAA GSA P + P G +A A + ++P
Sbjct: 296 AV----PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESP 347
Score = 28.1 bits (61), Expect = 2.1
Identities = 29/78 (37%), Positives = 31/78 (39%), Gaps = 13/78 (16%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPL 75
P AA S PA A A AAP P PAP+ R PG HP A P A P
Sbjct: 250 PAPAAPSPPAAP---APAAPAAAPPPPPPAPAT-------LARPPG-HP--AGPPTAAPA 296
Query: 76 SAPIIAGGHPAEAAAGSA 93
P A + A A A
Sbjct: 297 VPPPAAAQNGGSAGAAPA 314
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 43.1 bits (100), Expect = 6e-05
Identities = 40/101 (39%), Positives = 46/101 (45%), Gaps = 21/101 (20%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPA-PSPRWGLGCGRVRYPGPHPRR--AVEPAA 72
P A++APA P AAA + A P +P PA P PR + P P P AV P A
Sbjct: 137 PAPVAAAAPARAPRAAAAAATAPP-SPGPAQPGPR-AQRAAPLAAPPPAPAAPPAVAPPA 194
Query: 73 GPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPS 113
GP AP PA AA RE P PP PQ P+
Sbjct: 195 GPRRAP-----PPAVAA-----------REPPLPPPPQPPA 219
Score = 42.4 bits (98), Expect = 1e-04
Identities = 37/114 (32%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 3 GKSAVRHQLVLDCPREAASS-APALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPG 61
G + R+ + PR A+ AP P GA A + AA P PAP P
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPP------------PP 136
Query: 62 PHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVP---RPPVPQHP 112
P P A PA P +A A P + G A+ PR R P PP P P
Sbjct: 137 PAPVAAAAPARAPRAAAAAATAPP---SPGPAQPGPRAQRAAPLAAPPPAPAAP 187
Score = 26.2 bits (56), Expect = 7.8
Identities = 27/97 (27%), Positives = 32/97 (32%), Gaps = 26/97 (26%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPL 75
P + A PL A + AAP A P PRRA PA
Sbjct: 164 PAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG----------------PRRAPPPAVAAR 207
Query: 76 SAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHP 112
P+ P + A +QQ P PP PQ P
Sbjct: 208 EPPL---PPPPQPPAPPQQQQ-------PPPPQPQPP 234
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 42.7 bits (99), Expect = 8e-05
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 14 DCPREAASSAPALRPLG---AAATSRAA---PLAPLPAPSPRWGLGCGRVRYPGPHPRRA 67
DCP E ++APA LG + A RA P PLP P+P P P P
Sbjct: 361 DCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP-----------PLPPPAPP 409
Query: 68 VEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNS 116
+ PAA PL A HP + K + P PP P++ + ++
Sbjct: 410 LPPAAPPLPCAQKA-AHPPAGFTKTPKSSSPALKPKPNPPSPENTASSA 457
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 42.7 bits (99), Expect = 8e-05
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 39 PLAPLPAPSPRWGLGCGRVRYPGPHPRRAV--EPAAGPLSAPIIAGGHPA--EAAAGSAK 94
P AP PAP+ R R P + +RAV A GP P AGG EAA+G +
Sbjct: 56 PRAPSPAPALP-----ARARPPRENRKRAVPARAARGPPKRP--AGGQTGGVEAASGEER 108
Query: 95 QQPRHSREVPRPPVPQHPSGNSRSALQEA 123
QPR R P P P+ R +L EA
Sbjct: 109 SQPRRPRRPPPAPRRPRPAPGRRKSLYEA 137
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 42.7 bits (99), Expect = 8e-05
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 14 DCPREAASSAPALRPLG---AAATSRAA---PLAPLPAPSPRWGLGCGRVRYPGPHPRRA 67
DCP E ++APA LG + A RA P PLP P+P P P P
Sbjct: 361 DCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP-----------PLPPPAPP 409
Query: 68 VEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNS 116
+ PAA PL A HP + K + P PP P++ + ++
Sbjct: 410 LPPAAPPLPCAQKA-AHPPAGFTKTPKSSSPALKPKPNPPSPENTASSA 457
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 42.7 bits (99), Expect = 8e-05
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 39 PLAPLPAPSPRWGLGCGRVRYPGPHPRRAV--EPAAGPLSAPIIAGGHPA--EAAAGSAK 94
P AP PAP+ R R P + +RAV A GP P AGG EAA+G +
Sbjct: 56 PRAPSPAPALP-----ARARPPRENRKRAVPARAARGPPKRP--AGGQTGGVEAASGEER 108
Query: 95 QQPRHSREVPRPPVPQHPSGNSRSALQEA 123
QPR R P P P+ R +L EA
Sbjct: 109 SQPRRPRRPPPAPRRPRPAPGRRKSLYEA 137
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 42.7 bits (99), Expect = 8e-05
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 14 DCPREAASSAPALRPLG---AAATSRAA---PLAPLPAPSPRWGLGCGRVRYPGPHPRRA 67
DCP E ++APA LG + A RA P PLP P+P P P P
Sbjct: 361 DCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAP-----------PLPPPAPP 409
Query: 68 VEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNS 116
+ PAA PL A HP + K + P PP P++ + ++
Sbjct: 410 LPPAAPPLPCAQKA-AHPPAGFTKTPKSSSPALKPKPNPPSPENTASSA 457
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 42.7 bits (99), Expect = 8e-05
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 39 PLAPLPAPSPRWGLGCGRVRYPGPHPRRAV--EPAAGPLSAPIIAGGHPA--EAAAGSAK 94
P AP PAP+ R R P + +RAV A GP P AGG EAA+G +
Sbjct: 56 PRAPSPAPALP-----ARARPPRENRKRAVPARAARGPPKRP--AGGQTGGVEAASGEER 108
Query: 95 QQPRHSREVPRPPVPQHPSGNSRSALQEA 123
QPR R P P P+ R +L EA
Sbjct: 109 SQPRRPRRPPPAPRRPRPAPGRRKSLYEA 137
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 41.6 bits (96), Expect = 2e-04
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 15/113 (13%)
Query: 7 VRHQLVLDCPREAASSAPALRP---LGAAATSRAAPLA-------PLPAPSPRWGLGCGR 56
+ H ++ EA S PAL+P L A T AP P PAP+P G
Sbjct: 248 LEHSEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEV 307
Query: 57 VRYPGPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVP 109
P P ++A EPA G SAP PA + +Q P S+ + P P
Sbjct: 308 APAPAPELQQAPEPAVGLESAPA-----PALELEPAPEQDPAPSQTLELEPAP 355
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 41.6 bits (96), Expect = 2e-04
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 15/113 (13%)
Query: 7 VRHQLVLDCPREAASSAPALRP---LGAAATSRAAPLA-------PLPAPSPRWGLGCGR 56
+ H ++ EA S PAL+P L A T AP P PAP+P G
Sbjct: 193 LEHSEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEV 252
Query: 57 VRYPGPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVP 109
P P ++A EPA G SAP PA + +Q P S+ + P P
Sbjct: 253 APAPAPELQQAPEPAVGLESAPA-----PALELEPAPEQDPAPSQTLELEPAP 300
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 40.8 bits (94), Expect = 3e-04
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 21 SSAPALRPLGAAATSRAAPL----APLPAPSPRWGLGCGRVRYPGPHPRRA------VEP 70
S P+ RPL A ++S +APL +PL PSPR CG +R P RA
Sbjct: 251 SEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGG 310
Query: 71 AAGP------LSAPIIAGGHPAEAAAGSAKQQPRHSREVPRP 106
+GP L AP PA A G+ P SR P P
Sbjct: 311 CSGPDSKHRTLPAPPAPTAWPAAGAPGA--PNPAESRRGPGP 350
Score = 37.7 bits (86), Expect = 0.003
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPL-PAPSPRWGL---------GCGR---VRYPGP 62
PR A +SAP +P A P++ + P P R GL C R +R P
Sbjct: 90 PRAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLVNP 149
Query: 63 HPRRAVE--PAAGPLSAPIIAGGHPAEAAAGSAKQQ---------PRHSREVPRPPVPQH 111
P R E PA+ +++ + A G A G K + P+ + V PP P+
Sbjct: 150 SPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPER 209
Query: 112 P 112
P
Sbjct: 210 P 210
Score = 30.8 bits (68), Expect = 0.32
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 29/112 (25%)
Query: 22 SAPALRPLGAAATSRAAPLAPL----PAPSPRWGLGC------GRVRYPGPHPRRAVEPA 71
SA ALRP SR L P PA SP G GC R+P P ++ P
Sbjct: 38 SASALRP---PRLSRGKDLKPRCGRGPAHSPDPGEGCEAWRRLSADRWPRP---ASLSPR 91
Query: 72 AGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQEA 123
A SAP K QP ++PRP P R L +A
Sbjct: 92 AALASAP-------------GQKPQPARQAQLPRPVSGVRPPPRGRVGLSQA 130
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 40.8 bits (94), Expect = 3e-04
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 21 SSAPALRPLGAAATSRAAPL----APLPAPSPRWGLGCGRVRYPGPHPRRA------VEP 70
S P+ RPL A ++S +APL +PL PSPR CG +R P RA
Sbjct: 251 SEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGG 310
Query: 71 AAGP------LSAPIIAGGHPAEAAAGSAKQQPRHSREVPRP 106
+GP L AP PA A G+ P SR P P
Sbjct: 311 CSGPDSKHRTLPAPPAPTAWPAAGAPGA--PNPAESRRGPGP 350
Score = 37.7 bits (86), Expect = 0.003
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPL-PAPSPRWGL---------GCGR---VRYPGP 62
PR A +SAP +P A P++ + P P R GL C R +R P
Sbjct: 90 PRAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLVNP 149
Query: 63 HPRRAVE--PAAGPLSAPIIAGGHPAEAAAGSAKQQ---------PRHSREVPRPPVPQH 111
P R E PA+ +++ + A G A G K + P+ + V PP P+
Sbjct: 150 SPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPER 209
Query: 112 P 112
P
Sbjct: 210 P 210
Score = 30.8 bits (68), Expect = 0.32
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 29/112 (25%)
Query: 22 SAPALRPLGAAATSRAAPLAPL----PAPSPRWGLGC------GRVRYPGPHPRRAVEPA 71
SA ALRP SR L P PA SP G GC R+P P ++ P
Sbjct: 38 SASALRP---PRLSRGKDLKPRCGRGPAHSPDPGEGCEAWRRLSADRWPRP---ASLSPR 91
Query: 72 AGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQEA 123
A SAP K QP ++PRP P R L +A
Sbjct: 92 AALASAP-------------GQKPQPARQAQLPRPVSGVRPPPRGRVGLSQA 130
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 40.8 bits (94), Expect = 3e-04
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 18/102 (17%)
Query: 21 SSAPALRPLGAAATSRAAPL----APLPAPSPRWGLGCGRVRYPGPHPRRA------VEP 70
S P+ RPL A ++S +APL +PL PSPR CG +R P RA
Sbjct: 251 SEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGG 310
Query: 71 AAGP------LSAPIIAGGHPAEAAAGSAKQQPRHSREVPRP 106
+GP L AP PA A G+ P SR P P
Sbjct: 311 CSGPDSKHRTLPAPPAPTAWPAAGAPGA--PNPAESRRGPGP 350
Score = 37.7 bits (86), Expect = 0.003
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 24/121 (19%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPL-PAPSPRWGL---------GCGR---VRYPGP 62
PR A +SAP +P A P++ + P P R GL C R +R P
Sbjct: 90 PRAALASAPGQKPQPARQAQLPRPVSGVRPPPRGRVGLSQAPGRPLGACARAKGIRLVNP 149
Query: 63 HPRRAVE--PAAGPLSAPIIAGGHPAEAAAGSAKQQ---------PRHSREVPRPPVPQH 111
P R E PA+ +++ + A G A G K + P+ + V PP P+
Sbjct: 150 SPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGRGSAERTNHIPKDKQRVAAPPPPER 209
Query: 112 P 112
P
Sbjct: 210 P 210
Score = 30.8 bits (68), Expect = 0.32
Identities = 35/112 (31%), Positives = 41/112 (36%), Gaps = 29/112 (25%)
Query: 22 SAPALRPLGAAATSRAAPLAPL----PAPSPRWGLGC------GRVRYPGPHPRRAVEPA 71
SA ALRP SR L P PA SP G GC R+P P ++ P
Sbjct: 38 SASALRP---PRLSRGKDLKPRCGRGPAHSPDPGEGCEAWRRLSADRWPRP---ASLSPR 91
Query: 72 AGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQEA 123
A SAP K QP ++PRP P R L +A
Sbjct: 92 AALASAP-------------GQKPQPARQAQLPRPVSGVRPPPRGRVGLSQA 130
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 38.5 bits (88), Expect = 0.002
Identities = 37/123 (30%), Positives = 46/123 (37%), Gaps = 11/123 (8%)
Query: 14 DCPREAASSAPALRPLGAAATSRAAPLAPLPAPSP----RWGLGCGRVRYPGPHPRRAV- 68
D P E+ S P RP G A A + P PSP R PGP P
Sbjct: 552 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESPSETPGPRPAGPAG 611
Query: 69 -EPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHS-REVPRPPVPQHPSGNSRSA-LQEAKT 125
EPA P P G PA A + P + P P P+ +A LQ+A+
Sbjct: 612 DEPAESPSETP---GPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEV 668
Query: 126 EQT 128
E +
Sbjct: 669 ESS 671
Score = 38.1 bits (87), Expect = 0.002
Identities = 34/108 (31%), Positives = 39/108 (36%), Gaps = 13/108 (12%)
Query: 14 DCPREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGC----GRVRYPGPHPRRAV- 68
D P E+ S P RP G A A + P P P G PGP P
Sbjct: 532 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTR 591
Query: 69 -EPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGN 115
EPA P P G P AG A +P S P P P+G+
Sbjct: 592 DEPAESPSETP---GPRP----AGPAGDEPAESPSETPGPRPAGPAGD 632
>gi|148612882 cat eye syndrome chromosome region, candidate 2 [Homo
sapiens]
Length = 1484
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 58 RYPGPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSG 114
R PGP P+ A P + +SAP A G+P A S Q+P + + P P + + P G
Sbjct: 931 RLPGPFPQVA-HPMSVTVSAPKPALGNPGRAPENSEAQEPENDQAEPLPGLEEKPPG 986
>gi|169171833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 157
Score = 37.7 bits (86), Expect = 0.003
Identities = 32/101 (31%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 23 APALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRY-PGPHPRRAVEPAAGPLSAPIIA 81
AP+L P A + P+ PAP WG R R PGP P + P A P
Sbjct: 3 APSLCPPTAPSEPLTCPMGVSPAP---WGRPLRRSRARPGPCPPEGLVPRAPP------P 53
Query: 82 GGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQE 122
G P AA + + P P P P PS +A +E
Sbjct: 54 GPRPTAAATRATFRVPERRTVPPCPRRPARPSQPPSAARRE 94
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 37.7 bits (86), Expect = 0.003
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 15 CPREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGP 74
CP E ++ P G A + P A GC R+ GP R ++E + P
Sbjct: 526 CPGETLAARP-----GMAHSEEVRARQPARA-------GCPRL---GPAARGSLEGPSAP 570
Query: 75 LSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHP 112
A ++ G H A P+ SRE+P PP P P
Sbjct: 571 PQAALLPGNHVPNGCAA----DPKASRELPPPPPPPPP 604
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 37.7 bits (86), Expect = 0.003
Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 17/118 (14%)
Query: 26 LRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPR-------RAVEPAAG----P 74
+ P G +A S AP+ P AP+ RV P PHP + P G P
Sbjct: 1000 MSPHGESADSIPAPITPALAPASL----PARVSCPSPHPSPEARAPLASASPGPGDPSSP 1055
Query: 75 LSAPIIAGGH--PAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQEAKTEQTKT 130
L P G P A +++ + S E P P Q +G + E +T T T
Sbjct: 1056 LQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTSEERTASTST 1113
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 37.7 bits (86), Expect = 0.003
Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 17/118 (14%)
Query: 26 LRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPR-------RAVEPAAG----P 74
+ P G +A S AP+ P AP+ RV P PHP + P G P
Sbjct: 1060 MSPHGESADSIPAPITPALAPASL----PARVSCPSPHPSPEARAPLASASPGPGDPSSP 1115
Query: 75 LSAPIIAGGH--PAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQEAKTEQTKT 130
L P G P A +++ + S E P P Q +G + E +T T T
Sbjct: 1116 LQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTSEERTASTST 1173
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 37.4 bits (85), Expect = 0.003
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 13/105 (12%)
Query: 14 DCPREAASSAPA--LRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPA 71
D P +SAP L PL AA + P PAP P P P PR +PA
Sbjct: 748 DLPMAPPASAPPEFLDPLMGAAAPQYPGRGPPPAPPP-----------PPPPPRAPADPA 796
Query: 72 AGPLSAPIIAGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNS 116
A P +A ++ G + E P P P G +
Sbjct: 797 ASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGA 841
Score = 28.9 bits (63), Expect = 1.2
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Query: 39 PLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPLSAPIIAGGHPAEAAAGSAKQQPR 98
PL P P PR R+ P R V P P + AGG A + G + R
Sbjct: 1178 PLPPPPEAQPR------RLEPAPPRARPEVAPEGEPGAPDSRAGGDTALSGDGDPPKPER 1231
Query: 99 HSREVPR 105
E+PR
Sbjct: 1232 KGPEMPR 1238
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 37.0 bits (84), Expect = 0.004
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 22 SAPALRPLGAAATSRA-----APLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPLS 76
SA A+ P G+ S+A AP AP+P + R P PHP P+ P
Sbjct: 215 SATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP--PPHPSPHPPL 272
Query: 77 APIIAGGHPAEAAAGSAKQQPRHSREVPRP------PVPQHP 112
P+ G + +A S Q P H + P P P+ QHP
Sbjct: 273 QPLT--GSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP 312
Score = 34.7 bits (78), Expect = 0.022
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPA------PSPRWGLGCGRVRYPGPHPRRAVE 69
P S P L+PL +A +AP P P P +++PGP +
Sbjct: 262 PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 321
Query: 70 PAAGPLSAPIIAGGHPAEA---------AAGSAKQQPRHSREVPRPPVP 109
P A AP+ G PA A A+ SA Q + RE P PP P
Sbjct: 322 PQASQGQAPL--GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP 368
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.0 bits (84), Expect = 0.004
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 22 SAPALRPLGAAATSRA-----APLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPLS 76
SA A+ P G+ S+A AP AP+P + R P PHP P+ P
Sbjct: 769 SATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP--PPHPSPHPPL 826
Query: 77 APIIAGGHPAEAAAGSAKQQPRHSREVPRP------PVPQHP 112
P+ G + +A S Q P H + P P P+ QHP
Sbjct: 827 QPLT--GSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP 866
Score = 34.7 bits (78), Expect = 0.022
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPA------PSPRWGLGCGRVRYPGPHPRRAVE 69
P S P L+PL +A +AP P P P +++PGP +
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 70 PAAGPLSAPIIAGGHPAEA---------AAGSAKQQPRHSREVPRPPVP 109
P A AP+ G PA A A+ SA Q + RE P PP P
Sbjct: 876 PQASQGQAPL--GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP 922
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.0 bits (84), Expect = 0.004
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 22 SAPALRPLGAAATSRA-----APLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPLS 76
SA A+ P G+ S+A AP AP+P + R P PHP P+ P
Sbjct: 769 SATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHP--PPHPSPHPPL 826
Query: 77 APIIAGGHPAEAAAGSAKQQPRHSREVPRP------PVPQHP 112
P+ G + +A S Q P H + P P P+ QHP
Sbjct: 827 QPLT--GSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHP 866
Score = 34.7 bits (78), Expect = 0.022
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPA------PSPRWGLGCGRVRYPGPHPRRAVE 69
P S P L+PL +A +AP P P P +++PGP +
Sbjct: 816 PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLP 875
Query: 70 PAAGPLSAPIIAGGHPAEA---------AAGSAKQQPRHSREVPRPPVP 109
P A AP+ G PA A A+ SA Q + RE P PP P
Sbjct: 876 PQASQGQAPL--GTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAP 922
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 36.6 bits (83), Expect = 0.006
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 25 ALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRRAVEPAAGPL-SAPII--- 80
A +P+ A A + P PAPSP + PG P PA P AP +
Sbjct: 1280 APKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASPAKPPSPGAPALHVP 1339
Query: 81 AGGHPAEAAAGSAKQQPRHSREVPRPPVPQHPSGNSRSALQE 122
A A AAA +A P P PP P ++R L+E
Sbjct: 1340 AKPPRAAAAAAAAAAAP------PAPPEGASPGDSARQKLEE 1375
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.006
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRR----AVEPA 71
P +A S +LR A+ TS P P P P P L V P P P + + PA
Sbjct: 330 PLPSALSTSSLR---ASMTSTPPPPVPPPPPPPATALQAPAVP-PPPAPLQIAPGVLHPA 385
Query: 72 AGPLSAPIIAGGHPAEAAAGSAKQQPRH---SREV-----PRPPVPQHPSG 114
P++ P++ P AA + P H EV P PP P P G
Sbjct: 386 PPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.006
Identities = 35/111 (31%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 16 PREAASSAPALRPLGAAATSRAAPLAPLPAPSPRWGLGCGRVRYPGPHPRR----AVEPA 71
P +A S +LR A+ TS P P P P P L V P P P + + PA
Sbjct: 330 PLPSALSTSSLR---ASMTSTPPPPVPPPPPPPATALQAPAVP-PPPAPLQIAPGVLHPA 385
Query: 72 AGPLSAPIIAGGHPAEAAAGSAKQQPRH---SREV-----PRPPVPQHPSG 114
P++ P++ P AA + P H EV P PP P P G
Sbjct: 386 PPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,886,397
Number of Sequences: 37866
Number of extensions: 465912
Number of successful extensions: 4289
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 662
Number of HSP's that attempted gapping in prelim test: 3274
Number of HSP's gapped (non-prelim): 1496
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.