Search of human proteins with 28557703

Search of human proteins with 28557703

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo
sapiens]
         (274 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo sapi...   583   e-167
gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo sapi...   157   9e-39
gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens]         139   2e-33
gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens]       113   2e-25
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    34   0.12 
gi|194353946 homeobox D12 [Homo sapiens]                               33   0.21 
gi|45505151 nuclear factor I/C isoform 2 [Homo sapiens]                33   0.21 
gi|45505149 nuclear factor I/C isoform 1 [Homo sapiens]                33   0.21 
gi|7019333 nuclear receptor binding protein [Homo sapiens]             32   0.78 
gi|110611218 ribosome binding protein 1 [Homo sapiens]                 31   1.0  
gi|110611220 ribosome binding protein 1 [Homo sapiens]                 31   1.0  
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        31   1.0  
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ...    31   1.0  
gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6...    31   1.3  
gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5...    31   1.3  
gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is...    31   1.3  
gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is...    31   1.3  
gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is...    31   1.3  
gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is...    31   1.3  
gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is...    31   1.3  
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        31   1.3  
gi|30794260 hypothetical protein LOC90529 [Homo sapiens]               31   1.3  
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    30   2.3  
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    30   2.3  
gi|9945318 MAX binding protein [Homo sapiens]                          30   2.3  
gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s...    30   3.0  
gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s...    30   3.0  
gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens]         30   3.0  
gi|61966919 hypothetical protein LOC442444 [Homo sapiens]              30   3.0  
gi|150418007 RAN binding protein 2 [Homo sapiens]                      29   3.9  

>gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo
           sapiens]
          Length = 274

 Score =  583 bits (1504), Expect = e-167
 Identities = 274/274 (100%), Positives = 274/274 (100%)

Query: 1   MKLPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPAKYLRPSCTGYIDHDIS 60
           MKLPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPAKYLRPSCTGYIDHDIS
Sbjct: 1   MKLPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPAKYLRPSCTGYIDHDIS 60

Query: 61  MFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGMSSCPQVPMEERISNLRLNPTL 120
           MFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGMSSCPQVPMEERISNLRLNPTL
Sbjct: 61  MFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGMSSCPQVPMEERISNLRLNPTL 120

Query: 121 ASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCY 180
           ASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCY
Sbjct: 121 ASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCY 180

Query: 181 SLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSH 240
           SLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSH
Sbjct: 181 SLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSH 240

Query: 241 EVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDIRD 274
           EVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDIRD
Sbjct: 241 EVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDIRD 274


>gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo
           sapiens]
          Length = 289

 Score =  157 bits (397), Expect = 9e-39
 Identities = 90/224 (40%), Positives = 120/224 (53%), Gaps = 2/224 (0%)

Query: 40  GPGPAKYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGM 99
           G GP  Y+ PS  G+I+HD +   +PAY+L  R SE      +SPGP Y LDPK+TRFG 
Sbjct: 43  GSGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQ-DTSPGPIYFLDPKVTRFGR 101

Query: 100 SSCPQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLN-PAP 158
           S  P   M+ R  +     T     Y  EK+ P   R  P +T G R P + +D + PAP
Sbjct: 102 SCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAP 161

Query: 159 NQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPT 218
           N Y MP L G       ++P Y++  R       +D A  PGP  Y  P+ + Y+ R P 
Sbjct: 162 NAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPA 221

Query: 219 YSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHS 262
           ++M  R   P  L   PGPG+H  +QVTV+K   PAF+MGI+HS
Sbjct: 222 FTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHS 265


>gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens]
          Length = 254

 Score =  139 bits (351), Expect = 2e-33
 Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 4/239 (1%)

Query: 34  IMAKIKGPGPAKYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPK 93
           IMA    PGP KYL P  TG++ H  +  +APAY+   R +   +  + SPGP Y ++PK
Sbjct: 19  IMALYSSPGP-KYLIPPTTGFMKHTPTKLRAPAYSF--RGAPMLLAENCSPGPRYNVNPK 75

Query: 94  ITRFGMSSCPQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMD 153
           I R G    P   +  R     +  T     Y+ EK        AP ++   R     +D
Sbjct: 76  ILRTGKDLGPAYSILGRYQTKTML-TPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVD 134

Query: 154 LNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQ 213
             P P  Y +P+++GPNT    + P +S+  R K   + +D+   PGP  Y + +  + +
Sbjct: 135 STPGPAAYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTK 194

Query: 214 NRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHSLHLCPLVIDI 272
            ++P Y+MA R   P D T +PGPG+H  ++VT+ KP  P  T GIKHS ++ PL++D+
Sbjct: 195 FKAPQYTMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGIKHSDYMTPLLVDV 253


>gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens]
          Length = 253

 Score =  113 bits (282), Expect = 2e-25
 Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 8/239 (3%)

Query: 34  IMAKIKGPGPAKYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPK 93
           I A   GPGP KY  P  TGY  HD S  +APA+T  +R   ++  C   PGP +L+  +
Sbjct: 19  IAAHYGGPGP-KYKLPPNTGYALHDPSRPRAPAFTFGARFPTQQTTC--GPGPGHLVPAR 75

Query: 94  ITRFGMSSCPQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRR-PYRVM 152
           +T  G    P   +  R        T    +Y+ E+        AP++T   R    +  
Sbjct: 76  MTVRGTDGAPAYSIYGRPRRSAPFLTPGPGRYFPERAGNATYPSAPRHTIAPRNWGVQAE 135

Query: 153 DLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIY 212
             +P P  Y +P LLGP      +AP  S+  R     + ED++  PGP  Y    P +Y
Sbjct: 136 QQSPGPAAYTVPSLLGPRVIGKVSAPTCSIYGRRAAGSFFEDLSKTPGPCAYQVVSPGVY 195

Query: 213 QNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHSLHLCPLVID 271
           ++R+P +++  R + P D T +PGP ++ V Q    KP    ++ GI+HS +L PLV D
Sbjct: 196 KSRAPQFTILARTSLPQDNTRKPGPAAYNVDQ--HRKPR--GWSFGIRHSDYLAPLVTD 250


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 19/63 (30%), Positives = 28/63 (44%)

Query: 97   FGMSSCPQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNP 156
            + +SS P VP    +S+ R+NP L   Q+   +  PPG    P+    YR     +   P
Sbjct: 4113 YEVSSAPDVPSMGLVSSHRINPGLEYRQHLLLRGPPPGSANPPRLVSSYRLKQPNVPFPP 4172

Query: 157  APN 159
              N
Sbjct: 4173 TSN 4175


>gi|194353946 homeobox D12 [Homo sapiens]
          Length = 270

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 37/153 (24%), Positives = 53/153 (34%), Gaps = 16/153 (10%)

Query: 125 YYFEKIHPPGERRAPQYTFGYRR---PYRVMDLNPAPNQ---------YQMPLLLGPNTP 172
           +YF  + P G + A      Y R   P+     + AP Q         +  P L G   P
Sbjct: 24  FYFSNLRPNGGQLAALPPISYPRGALPWAATPASCAPAQPAGATAFGGFSQPYLAGSG-P 82

Query: 173 VSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLT 232
           +    P       ++  FY  + A GP      RP  +   + +P  +  K   Y     
Sbjct: 83  LGLQPPTAKDGPEEQAKFYAPEAAAGPEERGRTRPSFAPESSLAPAVAALKAAKYDYAGV 142

Query: 233 PRPGPGSHEVQQVTVHKPHIPAFTMGIKHSLHL 265
            R  PGS  + Q     P  P F    K  L+L
Sbjct: 143 GRATPGSTTLLQ---GAPCAPGFKDDTKGPLNL 172


>gi|45505151 nuclear factor I/C isoform 2 [Homo sapiens]
          Length = 499

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 18/134 (13%)

Query: 139 PQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGG 198
           P ++ G  + +   DLNPA    +  L   P+T  S +        R K+   +EDV   
Sbjct: 236 PNFSLGELQGHLAYDLNPASTGLRRTL---PSTSSSGS-------KRHKSGSMEEDVDTS 285

Query: 199 PGPTTYARPEPSIYQNRSPTYSMAKRFAYP-----LDLTPRPGPG---SHEVQQVTVHKP 250
           PG   Y  P      +R+ T  M    + P     +D +P   P    S  +   T H  
Sbjct: 286 PGGDYYTSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHR 345

Query: 251 HIPAFTMGIKHSLH 264
            + A   GI  S H
Sbjct: 346 PVIAVHSGIARSPH 359


>gi|45505149 nuclear factor I/C isoform 1 [Homo sapiens]
          Length = 428

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 18/134 (13%)

Query: 139 PQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGG 198
           P ++ G  + +   DLNPA    +  L   P+T  S +        R K+   +EDV   
Sbjct: 245 PNFSLGELQGHLAYDLNPASTGLRRTL---PSTSSSGS-------KRHKSGSMEEDVDTS 294

Query: 199 PGPTTYARPEPSIYQNRSPTYSMAKRFAYP-----LDLTPRPGPG---SHEVQQVTVHKP 250
           PG   Y  P      +R+ T  M    + P     +D +P   P    S  +   T H  
Sbjct: 295 PGGDYYTSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHR 354

Query: 251 HIPAFTMGIKHSLH 264
            + A   GI  S H
Sbjct: 355 PVIAVHSGIARSPH 368


>gi|7019333 nuclear receptor binding protein [Homo sapiens]
          Length = 535

 Score = 31.6 bits (70), Expect = 0.78
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)

Query: 191 YKEDVAGGPGP-TTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHK 249
           + EDV  G  P T +  P P   Q    T  +      P   TP P P   E ++V + +
Sbjct: 393 FLEDVRNGIYPLTAFGLPRPQQPQQEEVTSPVVP----PSVKTPTPEPAEVETRKVVLMQ 448

Query: 250 PHIPAFTMGIKHSLHL 265
            +I +   G+KH L L
Sbjct: 449 CNIESVEEGVKHHLTL 464


>gi|110611218 ribosome binding protein 1 [Homo sapiens]
          Length = 977

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 133 PGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYK 192
           P    AP  T   R P R   +  AP   Q P+++ P   V  A P   LAS  K+   K
Sbjct: 84  PDHDPAPNVTVLLREPVRAPAVAVAPTPVQPPIIVAPVATVP-AMPQEKLASSPKDKKKK 142

Query: 193 EDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHI 252
           E           A+ EP++    +    +  + A  L+  P+ G  +   Q     K   
Sbjct: 143 E--------KKVAKVEPAVSSVVNSIQVLTSKAAI-LETAPKEGRNTDVAQSPEAPKQEA 193

Query: 253 PA 254
           PA
Sbjct: 194 PA 195


>gi|110611220 ribosome binding protein 1 [Homo sapiens]
          Length = 977

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 133 PGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYK 192
           P    AP  T   R P R   +  AP   Q P+++ P   V  A P   LAS  K+   K
Sbjct: 84  PDHDPAPNVTVLLREPVRAPAVAVAPTPVQPPIIVAPVATVP-AMPQEKLASSPKDKKKK 142

Query: 193 EDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHI 252
           E           A+ EP++    +    +  + A  L+  P+ G  +   Q     K   
Sbjct: 143 E--------KKVAKVEPAVSSVVNSIQVLTSKAAI-LETAPKEGRNTDVAQSPEAPKQEA 193

Query: 253 PA 254
           PA
Sbjct: 194 PA 195


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 55/234 (23%), Positives = 81/234 (34%), Gaps = 37/234 (15%)

Query: 3   LPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPAKYLRPSCTGYID-HDISM 61
           LP G+  SV      +  P P      +T  +      PG ++    S T Y        
Sbjct: 595 LPAGSTPSVLVG---DSTPSPISSGSMETTALPGSTTKPGLSE---KSTTFYSSPRSPDT 648

Query: 62  FKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRF-GMSSCPQVPMEERISNLRLNPTL 120
              PA    S  SE+    HS PG  +      T F G ++ P +  E   S+    PT 
Sbjct: 649 THLPASMTSSGVSEESTTSHSRPGSTHT-----TAFPGSTTMPGLSQESTASHSSPGPTD 703

Query: 121 ASCQYYFEKIHPPGERRA----PQYTFGYRRPYRVMDLNPAPN-------QYQMPLLLGP 169
            +          PG   A    P+YT  + RP          N       +  MP+    
Sbjct: 704 TTLS--------PGSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEASMPVHSST 755

Query: 170 NTPVSRAAPCYSLASRDKN-----WFYKEDVAGGPGPTTYARPEPSIYQNRSPT 218
            +P +  +P  S   + ++     W   +D    P  TT A  EPS   + SP+
Sbjct: 756 RSPHTTLSPAGSTTRQGESTTFHSWPSSKDTRPAPPTTTSAFVEPSTTSHGSPS 809


>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
           sapiens]
          Length = 2036

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 55/234 (23%), Positives = 81/234 (34%), Gaps = 37/234 (15%)

Query: 3   LPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPAKYLRPSCTGYID-HDISM 61
           LP G+  SV      +  P P      +T  +      PG ++    S T Y        
Sbjct: 82  LPAGSTPSVLVG---DSTPSPISSGSMETTALPGSTTKPGLSE---KSTTFYSSPRSPDT 135

Query: 62  FKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRF-GMSSCPQVPMEERISNLRLNPTL 120
              PA    S  SE+    HS PG  +      T F G ++ P +  E   S+    PT 
Sbjct: 136 THLPASMTSSGVSEESTTSHSRPGSTHT-----TAFPGSTTMPGLSQESTASHSSPGPTD 190

Query: 121 ASCQYYFEKIHPPGERRA----PQYTFGYRRPYRVMDLNPAPN-------QYQMPLLLGP 169
            +          PG   A    P+YT  + RP          N       +  MP+    
Sbjct: 191 TTLS--------PGSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEASMPVHSST 242

Query: 170 NTPVSRAAPCYSLASRDKN-----WFYKEDVAGGPGPTTYARPEPSIYQNRSPT 218
            +P +  +P  S   + ++     W   +D    P  TT A  EPS   + SP+
Sbjct: 243 RSPHTTLSPAGSTTRQGESTTFHSWPSSKDTRPAPPTTTSAFVEPSTTSHGSPS 296


>gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6
           [Homo sapiens]
          Length = 250

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 21  GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 71


>gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5
           [Homo sapiens]
          Length = 366

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 21  GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 71


>gi|42518074 transcription factor 7 (T-cell specific, HMG-box)
           isoform 3 [Homo sapiens]
          Length = 269

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 21  GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 71


>gi|42518078 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 21  GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 71


>gi|42518080 transcription factor 7 (T-cell specific, HMG-box)
           isoform 1 [Homo sapiens]
          Length = 384

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 136 GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 186


>gi|47419938 transcription factor 7 (T-cell specific, HMG-box)
           isoform 2 [Homo sapiens]
          Length = 269

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 21  GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 71


>gi|42714657 transcription factor 7 (T-cell specific, HMG-box)
           isoform 4 [Homo sapiens]
          Length = 268

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/51 (23%), Positives = 25/51 (49%)

Query: 200 GPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           G   + +P+P +++   P + + +   Y    +P P P   ++ Q  VH+P
Sbjct: 21  GAGQHPQPQPPLHKANQPPHGVPQLSLYEHFNSPHPTPAPADISQKQVHRP 71


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 55/234 (23%), Positives = 80/234 (34%), Gaps = 37/234 (15%)

Query: 3   LPKGTRSSVYFAQHPEKEPLPSRQEVKQTPVIMAKIKGPGPAKYLRPSCTGYID-HDISM 61
           LP G+  SV      +  P P      +T  +      PG ++    S T Y        
Sbjct: 516 LPAGSTPSVLVG---DSTPSPISSGSMETTALPGSTTKPGLSE---KSTTFYSSPRSPDT 569

Query: 62  FKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRF-GMSSCPQVPMEERISNLRLNPTL 120
              PA    S  SE+    HS PG  +      T F G ++ P +  E   S+    PT 
Sbjct: 570 THLPASMTSSGVSEESTTSHSRPGSTHT-----TAFPGSTTMPGLSQESTASHSSPGPTD 624

Query: 121 ASCQYYFEKIHPPGERRA----PQYTFGYRRPYRVMDLNPAPN-------QYQMPLLLGP 169
            +          PG   A    P+YT  + RP          N       +  MP+    
Sbjct: 625 TTLS--------PGSTTASSLGPEYTTFHSRPGSTETTLLPDNTTASGLLEASMPVHSST 676

Query: 170 NTPVSRAAPCYSLASRDKN-----WFYKEDVAGGPGPTTYARPEPSIYQNRSPT 218
            +P +  +P  S   + ++     W    D    P  TT A  EPS   + SP+
Sbjct: 677 RSPHTTLSPAGSTTRQGESTTFHSWPSSNDTRPAPPTTTSAFVEPSTTSHGSPS 730


>gi|30794260 hypothetical protein LOC90529 [Homo sapiens]
          Length = 287

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 156 PAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNR 215
           P P QY++   LGP      +A   S  S    W       G PGP TY   +P +   +
Sbjct: 220 PGPGQYEIVDYLGPRKHFISSA---SFVSNTSRWTAAPPQPGLPGPATY---KPELPGKQ 273

Query: 216 SPTYSMAKRF 225
           S  Y+  K++
Sbjct: 274 SFLYNEDKKW 283


>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
            sapiens]
          Length = 1858

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 233  PRPGPGSHEVQQVTVHKPHIPAFTMGIKHSL 263
            P P PG H VQQ   H+ H  A  +G  H++
Sbjct: 1632 PPPAPGPHLVQQPNSHQQHSVAHVVGPVHAV 1662


>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
            sapiens]
          Length = 1858

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 233  PRPGPGSHEVQQVTVHKPHIPAFTMGIKHSL 263
            P P PG H VQQ   H+ H  A  +G  H++
Sbjct: 1632 PPPAPGPHLVQQPNSHQQHSVAHVVGPVHAV 1662


>gi|9945318 MAX binding protein [Homo sapiens]
          Length = 582

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 192 KEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKP 250
           +ED AG   P    RP+P + ++  P  S       P  L P P P  H V     H P
Sbjct: 344 EEDRAGLGPPKLSHRPQPELLKSTLPPPSTT-----PAPLPPHPHPHPHSVALPPAHLP 397


>gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo
           sapiens]
          Length = 1074

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 19/128 (14%)

Query: 130 IHPPGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDK-N 188
           + PPG  RA    F Y RP         P +      L    P ++    Y +   +   
Sbjct: 542 VDPPGSYRAGGTVFRYNRP---------PREEGKGESLSAEGPTTQPVDVYMIFQEENPG 592

Query: 189 WFYKEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPG--PGSHEVQQVT 246
            FY+  ++  P       PEP + Q +        R   PL   PRP   PG+ + Q   
Sbjct: 593 VFYQYVISSPPPILENPTPEPPVPQLQPEIL----RVEPPLAPAPRPARTPGTLQRQ--- 645

Query: 247 VHKPHIPA 254
           V  P +PA
Sbjct: 646 VRIPQMPA 653


>gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo
           sapiens]
          Length = 877

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 33/128 (25%), Positives = 47/128 (36%), Gaps = 19/128 (14%)

Query: 130 IHPPGERRAPQYTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDK-N 188
           + PPG  RA    F Y RP         P +      L    P ++    Y +   +   
Sbjct: 542 VDPPGSYRAGGTVFRYNRP---------PREEGKGESLSAEGPTTQPVDVYMIFQEENPG 592

Query: 189 WFYKEDVAGGPGPTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPG--PGSHEVQQVT 246
            FY+  ++  P       PEP + Q +        R   PL   PRP   PG+ + Q   
Sbjct: 593 VFYQYVISSPPPILENPTPEPPVPQLQPEIL----RVEPPLAPAPRPARTPGTLQRQ--- 645

Query: 247 VHKPHIPA 254
           V  P +PA
Sbjct: 646 VRIPQMPA 653


>gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens]
          Length = 800

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 6/96 (6%)

Query: 141 YTFGYRRPYRVMDLNPAPNQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPG 200
           Y + Y  P  +     +P+QY M    G  TP   +AP      + +    +  V G   
Sbjct: 97  YPYSYYYPMSMYQSYGSPSQYGMAGSYGSATPQQPSAP------QHQGTLNQPPVPGMDE 150

Query: 201 PTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPG 236
             +Y  P   +   + P  S     A+ L+  P+PG
Sbjct: 151 SMSYQAPPQQLPSAQPPQPSNPPHGAHTLNSGPQPG 186


>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
          Length = 1035

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 15/112 (13%)

Query: 63  KAPAYTLHSRHSEKRMVCHSSPGPCYL----LDPKITRFGMSSCPQVPMEERISNLR--- 115
           K    +LH+   E R V H  P P       L P+  +  +SS    P+E R+S+LR   
Sbjct: 708 KTRVSSLHAEPPESR-VSHLCPEPPETGVSHLRPEPPKPRVSSLRPEPLETRVSHLRPEP 766

Query: 116 -------LNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLNPAPNQ 160
                  L+P L   +     + PP  RR         +  RV  L P P +
Sbjct: 767 PETGVSHLHPELPKPRVSSLHLEPPKTRRVSSLRLEPPKTGRVSSLCPEPTK 818


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 201 PTTYARPEPSIYQNRSPTYSMAKRFAYPLDLTPRPGP 237
           P T A   PS+Y ++SP Y+         ++TP  GP
Sbjct: 865 PLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGP 901


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,408,873
Number of Sequences: 37866
Number of extensions: 841848
Number of successful extensions: 1996
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1928
Number of HSP's gapped (non-prelim): 94
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.