Search of human proteins with 27894313

Search of human proteins with 27894313

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo
sapiens]
         (157 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]   319   5e-88
gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo sapiens]   178   1e-45
gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]    152   9e-38
gi|9665234 interleukin 1 family, member 9 [Homo sapiens]              137   5e-33
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]    91   4e-19
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ...    91   4e-19
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]    91   4e-19
gi|27894310 interleukin 1 family, member 5 [Homo sapiens]              77   8e-15
gi|6912432 interleukin 1 family, member 5 [Homo sapiens]               77   8e-15
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]    74   7e-14
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]    74   7e-14
gi|27894307 interleukin 1 family, member 10 [Homo sapiens]             72   1e-13
gi|27894304 interleukin 1 family, member 10 [Homo sapiens]             72   1e-13
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso...    68   4e-12
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa...    68   4e-12
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa...    68   4e-12
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa...    67   5e-12
gi|10835145 interleukin 1, beta proprotein [Homo sapiens]              61   3e-10
gi|190341074 pyridoxal-dependent decarboxylase domain containing...    29   1.4  
gi|41462397 RAN guanine nucleotide release factor [Homo sapiens]       29   1.9  
gi|194239731 eukaryotic translation elongation factor 1 delta is...    28   3.2  
gi|194239727 eukaryotic translation elongation factor 1 delta is...    28   3.2  
gi|194239725 eukaryotic translation elongation factor 1 delta is...    28   3.2  
gi|194239723 eukaryotic translation elongation factor 1 delta is...    28   3.2  
gi|25453472 eukaryotic translation elongation factor 1 delta iso...    28   3.2  
gi|25453474 eukaryotic translation elongation factor 1 delta iso...    28   3.2  
gi|194239729 eukaryotic translation elongation factor 1 delta is...    28   3.2  
gi|27894330 interleukin 1, alpha proprotein [Homo sapiens]             27   5.5  

>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
          Length = 157

 Score =  319 bits (818), Expect = 5e-88
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGN 60
           MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGN
Sbjct: 1   MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGN 60

Query: 61  MVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSV 120
           MVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSV
Sbjct: 61  MVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSV 120

Query: 121 SYPGWFIATSTTSGQPIFLTKERGITNNTNFYLDSVE 157
           SYPGWFIATSTTSGQPIFLTKERGITNNTNFYLDSVE
Sbjct: 121 SYPGWFIATSTTSGQPIFLTKERGITNNTNFYLDSVE 157


>gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo
          sapiens]
          Length = 164

 Score =  178 bits (452), Expect = 1e-45
 Identities = 88/93 (94%), Positives = 89/93 (95%)

Query: 1  MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGN 60
          MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGN
Sbjct: 1  MNPQREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGN 60

Query: 61 MVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMD 93
          MVYLGIKGKDLCLFCAEIQGKPTLQLK +   D
Sbjct: 61 MVYLGIKGKDLCLFCAEIQGKPTLQLKLQGSQD 93


>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
          Length = 158

 Score =  152 bits (385), Expect = 9e-38
 Identities = 71/145 (48%), Positives = 100/145 (68%)

Query: 9   PKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKG 68
           P+  +I+D    VWVL   +LIA P    + PVT+ LI+CR  E  +K++GN +YLG+ G
Sbjct: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNG 69

Query: 69  KDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYPGWFIA 128
            +LCL CA++  +PTLQLKEK+IMDLY + +  K FLF+H++ G  S F+SV++PGWFIA
Sbjct: 70  LNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIA 129

Query: 129 TSTTSGQPIFLTKERGITNNTNFYL 153
            S+  G P+ LT+E G  N T+F L
Sbjct: 130 VSSEGGCPLILTQELGKANTTDFGL 154


>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
          Length = 169

 Score =  137 bits (344), Expect = 5e-33
 Identities = 68/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)

Query: 4   QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVY 63
           Q    P +  I D  Q VW L G +L+A P S S+ PVT+ +I C+  E  ++ +G+ +Y
Sbjct: 17  QSMCKPITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIY 76

Query: 64  LGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYP 123
           LGI+  ++CL+C ++  +PTLQLKE+ IMDLY + +  KPFLF+  K G TS  +SV++P
Sbjct: 77  LGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFP 136

Query: 124 GWFIATSTTSGQPIFLTKERGITNNTNFYLD 154
            WFIA+S    QPI LT E G + NT F L+
Sbjct: 137 DWFIASSKRD-QPIILTSELGKSYNTAFELN 166


>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
          Length = 197

 Score = 90.9 bits (224), Expect = 4e-19
 Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 4/135 (2%)

Query: 9   PKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKG 68
           PK ++I D    V VL   +LIA P    I+P     +A   +  S  EKG+ + LG+  
Sbjct: 36  PKKFSIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSAS-AEKGSPILLGVSK 94

Query: 69  KDLCLFCAEIQGK--PTLQLKEKNIMDLYVEKK-AQKPFLFFHNKEGSTSVFQSVSYPGW 125
            + CL+C + +G+  P+LQLK++ +M L  +K+ A++PF+F+  + GS ++ +S ++PGW
Sbjct: 95  GEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGW 154

Query: 126 FIATSTTSGQPIFLT 140
           FI TS    +P+ +T
Sbjct: 155 FICTSCNCNEPVGVT 169


>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
           [Homo sapiens]
          Length = 218

 Score = 90.9 bits (224), Expect = 4e-19
 Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 4/135 (2%)

Query: 9   PKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKG 68
           PK ++I D    V VL   +LIA P    I+P     +A   +  S  EKG+ + LG+  
Sbjct: 57  PKKFSIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSAS-AEKGSPILLGVSK 115

Query: 69  KDLCLFCAEIQGK--PTLQLKEKNIMDLYVEKK-AQKPFLFFHNKEGSTSVFQSVSYPGW 125
            + CL+C + +G+  P+LQLK++ +M L  +K+ A++PF+F+  + GS ++ +S ++PGW
Sbjct: 116 GEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGW 175

Query: 126 FIATSTTSGQPIFLT 140
           FI TS    +P+ +T
Sbjct: 176 FICTSCNCNEPVGVT 190


>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
          Length = 192

 Score = 90.9 bits (224), Expect = 4e-19
 Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 4/135 (2%)

Query: 9   PKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKG 68
           PK ++I D    V VL   +LIA P    I+P     +A   +  S  EKG+ + LG+  
Sbjct: 31  PKKFSIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSAS-AEKGSPILLGVSK 89

Query: 69  KDLCLFCAEIQGK--PTLQLKEKNIMDLYVEKK-AQKPFLFFHNKEGSTSVFQSVSYPGW 125
            + CL+C + +G+  P+LQLK++ +M L  +K+ A++PF+F+  + GS ++ +S ++PGW
Sbjct: 90  GEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPGW 149

Query: 126 FIATSTTSGQPIFLT 140
           FI TS    +P+ +T
Sbjct: 150 FICTSCNCNEPVGVT 164


>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score = 76.6 bits (187), Expect = 8e-15
 Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 12  YAIRDSRQMVWVLSGNSLIAAPL--SRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGK 69
           + ++DS   V  L  N L+A  L   + IK   + ++  R  + S       V LG++G 
Sbjct: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP----VILGVQGG 64

Query: 70  DLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYPGWFIAT 129
             CL C   Q +PTL L+  NIM+LY+  K  K F F+    G TS F+S +YPGWF+ T
Sbjct: 65  SQCLSCGVGQ-EPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCT 123

Query: 130 STTSGQPIFLTK--ERGITNN--TNFYLDSVE 157
              + QP+ LT+  E G  N   T+FY    +
Sbjct: 124 VPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155


>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score = 76.6 bits (187), Expect = 8e-15
 Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 12  YAIRDSRQMVWVLSGNSLIAAPL--SRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGK 69
           + ++DS   V  L  N L+A  L   + IK   + ++  R  + S       V LG++G 
Sbjct: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP----VILGVQGG 64

Query: 70  DLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYPGWFIAT 129
             CL C   Q +PTL L+  NIM+LY+  K  K F F+    G TS F+S +YPGWF+ T
Sbjct: 65  SQCLSCGVGQ-EPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCT 123

Query: 130 STTSGQPIFLTK--ERGITNN--TNFYLDSVE 157
              + QP+ LT+  E G  N   T+FY    +
Sbjct: 124 VPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155


>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
          Length = 178

 Score = 73.6 bits (179), Expect = 7e-14
 Identities = 33/87 (37%), Positives = 60/87 (68%), Gaps = 3/87 (3%)

Query: 57  EKGNMVYLGIKGKDLCLFCAEIQGK--PTLQLKEKNIMDLYVEKK-AQKPFLFFHNKEGS 113
           EKG+ + LG+   + CL+C + +G+  P+LQLK++ +M L  +K+ A++PF+F+  + GS
Sbjct: 64  EKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGS 123

Query: 114 TSVFQSVSYPGWFIATSTTSGQPIFLT 140
            ++ +S ++PGWFI TS    +P+ +T
Sbjct: 124 WNMLESAAHPGWFICTSCNCNEPVGVT 150


>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
          Length = 157

 Score = 73.6 bits (179), Expect = 7e-14
 Identities = 33/87 (37%), Positives = 60/87 (68%), Gaps = 3/87 (3%)

Query: 57  EKGNMVYLGIKGKDLCLFCAEIQGK--PTLQLKEKNIMDLYVEKK-AQKPFLFFHNKEGS 113
           EKG+ + LG+   + CL+C + +G+  P+LQLK++ +M L  +K+ A++PF+F+  + GS
Sbjct: 43  EKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGS 102

Query: 114 TSVFQSVSYPGWFIATSTTSGQPIFLT 140
            ++ +S ++PGWFI TS    +P+ +T
Sbjct: 103 WNMLESAAHPGWFICTSCNCNEPVGVT 129


>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score = 72.4 bits (176), Expect = 1e-13
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query: 62  VYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVS 121
           ++LGI+G   CL C E +  P+LQL++ NI +LY   +    F FF +  GS    ++ +
Sbjct: 57  IFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAA 116

Query: 122 YPGWFIATSTTSGQPIFLTKERGITNNTNFYLD 154
           +PGWF+       QP+ LTKE   +  T FY +
Sbjct: 117 WPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149


>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score = 72.4 bits (176), Expect = 1e-13
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query: 62  VYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVS 121
           ++LGI+G   CL C E +  P+LQL++ NI +LY   +    F FF +  GS    ++ +
Sbjct: 57  IFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAA 116

Query: 122 YPGWFIATSTTSGQPIFLTKERGITNNTNFYLD 154
           +PGWF+       QP+ LTKE   +  T FY +
Sbjct: 117 WPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149


>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
           [Homo sapiens]
          Length = 177

 Score = 67.8 bits (164), Expect = 4e-12
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 28/165 (16%)

Query: 4   QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSR---------SIKPVTLHLIACRDTEFS 54
           ++ +  +++ I D  Q  + L  N L+A  L            + P+  H +        
Sbjct: 30  RKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL-------- 81

Query: 55  DKEKGNMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGST 114
                   +LGI G  +CL C +   +  LQL+  NI DL   +K  K F F  +  G T
Sbjct: 82  --------FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPT 133

Query: 115 SVFQSVSYPGWFIATSTTSGQPIFLTK--ERGITNNTNFYLDSVE 157
           + F+S + PGWF+ T+  + QP+ LT   + G+   T FY    E
Sbjct: 134 TSFESAACPGWFLCTAMEADQPVSLTNMPDEGVM-VTKFYFQEDE 177


>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
           sapiens]
          Length = 180

 Score = 67.8 bits (164), Expect = 4e-12
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 28/165 (16%)

Query: 4   QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSR---------SIKPVTLHLIACRDTEFS 54
           ++ +  +++ I D  Q  + L  N L+A  L            + P+  H +        
Sbjct: 33  RKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL-------- 84

Query: 55  DKEKGNMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGST 114
                   +LGI G  +CL C +   +  LQL+  NI DL   +K  K F F  +  G T
Sbjct: 85  --------FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPT 136

Query: 115 SVFQSVSYPGWFIATSTTSGQPIFLTK--ERGITNNTNFYLDSVE 157
           + F+S + PGWF+ T+  + QP+ LT   + G+   T FY    E
Sbjct: 137 TSFESAACPGWFLCTAMEADQPVSLTNMPDEGVM-VTKFYFQEDE 180


>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
           sapiens]
          Length = 159

 Score = 67.8 bits (164), Expect = 4e-12
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 28/165 (16%)

Query: 4   QREAAPKSYAIRDSRQMVWVLSGNSLIAAPLSR---------SIKPVTLHLIACRDTEFS 54
           ++ +  +++ I D  Q  + L  N L+A  L            + P+  H +        
Sbjct: 12  RKSSKMQAFRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHAL-------- 63

Query: 55  DKEKGNMVYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGST 114
                   +LGI G  +CL C +   +  LQL+  NI DL   +K  K F F  +  G T
Sbjct: 64  --------FLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPT 115

Query: 115 SVFQSVSYPGWFIATSTTSGQPIFLTK--ERGITNNTNFYLDSVE 157
           + F+S + PGWF+ T+  + QP+ LT   + G+   T FY    E
Sbjct: 116 TSFESAACPGWFLCTAMEADQPVSLTNMPDEGVM-VTKFYFQEDE 159


>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
           sapiens]
          Length = 143

 Score = 67.4 bits (163), Expect = 5e-12
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 62  VYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVS 121
           ++LGI G  +CL C +   +  LQL+  NI DL   +K  K F F  +  G T+ F+S +
Sbjct: 47  LFLGIHGGKMCLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAA 106

Query: 122 YPGWFIATSTTSGQPIFLTK--ERGITNNTNFYLDSVE 157
            PGWF+ T+  + QP+ LT   + G+   T FY    E
Sbjct: 107 CPGWFLCTAMEADQPVSLTNMPDEGVM-VTKFYFQEDE 143


>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
          Length = 269

 Score = 61.2 bits (147), Expect = 3e-10
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 7/146 (4%)

Query: 14  IRDSRQMVWVLSGNSLIAAPLSRSI---KPVTLHLIACRDTEFSDKEKGNMVYLGIKGKD 70
           +RDS+Q   V+SG   + A   +     + V   +   +  E +DK     V LG+K K+
Sbjct: 126 LRDSQQKSLVMSGPYELKALHLQGQDMEQQVVFSMSFVQGEESNDKIP---VALGLKEKN 182

Query: 71  LCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYPGWFIATS 130
           L L C     KPTLQL+  +  + Y +KK +K F+F   +  +   F+S  +P W+I+TS
Sbjct: 183 LYLSCVLKDDKPTLQLESVDPKN-YPKKKMEKRFVFNKIEINNKLEFESAQFPNWYISTS 241

Query: 131 TTSGQPIFLTKERGITNNTNFYLDSV 156
                P+FL   +G  + T+F +  V
Sbjct: 242 QAENMPVFLGGTKGGQDITDFTMQFV 267


>gi|190341074 pyridoxal-dependent decarboxylase domain containing 1
           [Homo sapiens]
          Length = 788

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 12/72 (16%)

Query: 60  NMVYLGIKG-----KDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKP---FLFFHNKE 111
           ++ YLG+ G     K  C     +Q      LK+ N + + VE +   P   F FF    
Sbjct: 344 SLQYLGLDGFVERIKHACQLSQRLQES----LKKVNYIKILVEDELSSPVVVFRFFQELP 399

Query: 112 GSTSVFQSVSYP 123
           GS  VF++V  P
Sbjct: 400 GSDPVFKAVPVP 411


>gi|41462397 RAN guanine nucleotide release factor [Homo sapiens]
          Length = 186

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 10  KSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLH 44
           ++ A+R   Q  WVLSG   IA    +  K VTLH
Sbjct: 91  ENLALRGRCQEAWVLSGKQQIAKENQQVAKDVTLH 125


>gi|194239731 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 118 SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 176

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 177 ERLRQ-YAEKKAKKPAL 192


>gi|194239727 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 118 SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 176

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 177 ERLRQ-YAEKKAKKPAL 192


>gi|194239725 eukaryotic translation elongation factor 1 delta
           isoform 3 [Homo sapiens]
          Length = 646

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 483 SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 541

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 542 ERLRQ-YAEKKAKKPAL 557


>gi|194239723 eukaryotic translation elongation factor 1 delta
           isoform 1 [Homo sapiens]
          Length = 647

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 484 SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 542

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 543 ERLRQ-YAEKKAKKPAL 558


>gi|25453472 eukaryotic translation elongation factor 1 delta
           isoform 2 [Homo sapiens]
          Length = 281

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 118 SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 176

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 177 ERLRQ-YAEKKAKKPAL 192


>gi|25453474 eukaryotic translation elongation factor 1 delta
           isoform 1 [Homo sapiens]
          Length = 647

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 484 SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 542

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 543 ERLRQ-YAEKKAKKPAL 558


>gi|194239729 eukaryotic translation elongation factor 1 delta
           isoform 4 [Homo sapiens]
          Length = 257

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 31  AAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGKDLCLFCA--EIQGKPTLQLKE 88
           ++P  R+  P T H+   R  E   K+         +  D+ LF +  E + K   QL+E
Sbjct: 94  SSPGHRATAPQTQHVSPMRQVEPPAKKPATPAE-DDEDDDIDLFGSDNEEEDKEAAQLRE 152

Query: 89  KNIMDLYVEKKAQKPFL 105
           + +   Y EKKA+KP L
Sbjct: 153 ERLRQ-YAEKKAKKPAL 168


>gi|27894330 interleukin 1, alpha proprotein [Homo sapiens]
          Length = 271

 Score = 27.3 bits (59), Expect = 5.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 105 LFFHNKEGSTSVFQSVSYPGWFIAT 129
           LFF    G+ + F SV++P  FIAT
Sbjct: 222 LFFWETHGTKNYFTSVAHPNLFIAT 246


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,836,245
Number of Sequences: 37866
Number of extensions: 236521
Number of successful extensions: 449
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 415
Number of HSP's gapped (non-prelim): 28
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.