Guide to the Human Genome
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Name: RANGRF Sequence: fasta or formatted (186aa) NCBI GI: 41462397
Description:

RAN guanine nucleotide release factor

Referenced in:

Ran and Rag

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         15           3
 C cysteine            1.6          3           1
 D aspartate           5.9         11           1
 E glutamate           6.5         12           1
 F phenylalanine       3.8          7           1
 G glycine             6.5         12           2
 H histidine           3.2          6           1
 I isoleucine          2.7          5           1
 K lysine              1.6          3           1
 L leucine            13.4         25           3
 M methionine          1.1          2           1
 N asparagine          3.8          7           1
 P proline             8.6         16           3
 Q glutamine           8.6         16           2
 R arginine            4.8          9           1
 S serine              5.9         11           2
 T threonine           3.8          7           1
 V valine              8.1         15           1
 W tryptophan          1.1          2           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAN guanine nucleotide release factor 
CHD1L                 0.011   chromodomain helicase DNA binding protein 1-like [H...
BAI1                  0.011   brain-specific angiogenesis inhibitor 1 precursor [...
IL1F8                 0.011   interleukin 1 family, member 8 isoform 2 
IL1F8                 0.011   interleukin 1 family, member 8 isoform 1 
ZNF608                0.008   zinc finger protein 608 
JHDM1D                0.006   jumonji C domain containing histone demethylase 1 ho...
MX2                   0.006   myxovirus resistance protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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