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Search of human proteins with 27735027
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27735027 hypothetical protein LOC284369 [Homo sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27735027 hypothetical protein LOC284369 [Homo sapiens] 387 e-108
gi|31377639 sialic acid binding Ig-like lectin 10 [Homo sapiens] 95 3e-20
gi|205830470 sialic acid binding Ig-like lectin 11 isoform 1 [Ho... 84 8e-17
gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens] 77 9e-15
gi|18104957 myelin associated glycoprotein isoform b precursor [... 44 1e-04
gi|11225258 myelin associated glycoprotein isoform a precursor [... 43 2e-04
gi|68163411 activated leukocyte cell adhesion molecule [Homo sap... 39 0.002
gi|121114304 fms-related tyrosine kinase 3 [Homo sapiens] 39 0.004
gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens] 38 0.005
gi|16506826 sialic acid binding immunoglobulin-like lectin-like ... 38 0.006
gi|16506828 sialic acid binding immunoglobulin-like lectin-like ... 38 0.006
gi|118197279 sialic acid binding Ig-like lectin 7 isoform 2 [Hom... 37 0.008
gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo ... 37 0.008
gi|61742797 basal cell adhesion molecule isoform 2 precursor [Ho... 35 0.041
gi|31543106 basal cell adhesion molecule isoform 1 precursor [Ho... 35 0.041
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 33 0.12
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 33 0.12
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 33 0.12
gi|23943856 sialic acid binding Ig-like lectin 9 [Homo sapiens] 32 0.27
gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo... 32 0.35
gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo ... 32 0.35
gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo s... 32 0.35
gi|222352127 sidekick 2 [Homo sapiens] 32 0.46
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 32 0.46
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 32 0.46
gi|169217528 PREDICTED: similar to sidekick homolog 2 (chicken) ... 32 0.46
gi|110349719 titin isoform N2-A [Homo sapiens] 31 0.60
gi|110349717 titin isoform novex-2 [Homo sapiens] 31 0.60
gi|110349713 titin isoform novex-1 [Homo sapiens] 31 0.60
gi|110349715 titin isoform N2-B [Homo sapiens] 31 0.60
>gi|27735027 hypothetical protein LOC284369 [Homo sapiens]
Length = 197
Score = 387 bits (993), Expect = e-108
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTST 60
MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTST
Sbjct: 1 MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTST 60
Query: 61 MLGPWANSTISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAI 120
MLGPWANSTISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAI
Sbjct: 61 MLGPWANSTISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAI 120
Query: 121 YAGIVIALLFLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELEMSLKPEEPGKPVV 180
YAGIVIALLFLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELEMSLKPEEPGKPVV
Sbjct: 121 YAGIVIALLFLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELEMSLKPEEPGKPVV 180
Query: 181 ATFSESRILEKQDKRAS 197
ATFSESRILEKQDKRAS
Sbjct: 181 ATFSESRILEKQDKRAS 197
>gi|31377639 sialic acid binding Ig-like lectin 10 [Homo sapiens]
Length = 697
Score = 95.1 bits (235), Expect = 3e-20
Identities = 57/138 (41%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
Query: 11 KLLNSSCSLE-KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANST 69
KLL SCS E + L CSCS P PS++WW+G + + S +VT + GPWANS+
Sbjct: 447 KLLGPSCSWEAEGLHCSCSSQASPAPSLRWWLGEELLEGNSSQDSFEVTPSSAGPWANSS 506
Query: 70 ISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALL 129
+SL G+RL CE N +G + SIL + K L + AF G G GI ALL
Sbjct: 507 LSLHGGLSSGLRLRCEAWNVHGAQSGSILQLPDKKGLISTAFSNGAFLG---IGIT-ALL 562
Query: 130 FLCLLPLIVKHIRKKQAK 147
FLCL +I+K + K++ +
Sbjct: 563 FLCLALIIMKILPKRRTQ 580
>gi|205830470 sialic acid binding Ig-like lectin 11 isoform 1 [Homo
sapiens]
Length = 698
Score = 84.0 bits (206), Expect = 8e-17
Identities = 57/147 (38%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 9 PAKLLNSSCSLE-KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWAN 67
P +LL SCS E + L CSCS P PS++WW+G + + GS +VT + GPWAN
Sbjct: 456 PPQLLGPSCSWEAEGLHCSCSSQASPAPSLRWWLGEELLEGNSSQGSFEVTPSSAGPWAN 515
Query: 68 STISLTEEPEMGMRLLCEGKNQNGTHALSIL-LMSRKSSLAAQAFVKGLIQGAIYAGIVI 126
S++SL G+RL C+ N +G + S+ L+ K GL GA V
Sbjct: 516 SSLSLHGGLSSGLRLRCKAWNVHGAQSGSVFQLLPGKLEHGG-----GLGLGAALGAGVA 570
Query: 127 ALLFL--CLLPLIVKHIRKKQAKKAAA 151
ALL CL+ VK RK+ K+AAA
Sbjct: 571 ALLAFCSCLVVFRVKICRKEARKRAAA 597
>gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]
Length = 551
Score = 77.0 bits (188), Expect = 9e-15
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 11 KLLNSSCSLE-KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANST 69
+LL SCS E + L C CSF P PS+ W + P+ + GS +V S+ GPWANS+
Sbjct: 336 QLLGPSCSWEAEGLHCRCSFRARPAPSLCWRLEEKPLEGNSSQGSFKVNSSSAGPWANSS 395
Query: 70 ISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALL 129
+ L +++ C+ N G+ + S+LL+ +S+L G++ A+ V+ALL
Sbjct: 396 LILHGGLSSDLKVSCKAWNIYGSQSGSVLLLQGRSNLGT-----GVVPAALGGAGVMALL 450
Query: 130 --FLCLLPLIVKHIRKKQA 146
LCL+ ++ R+KQA
Sbjct: 451 CICLCLIFFLIVKARRKQA 469
>gi|18104957 myelin associated glycoprotein isoform b precursor
[Homo sapiens]
Length = 582
Score = 43.5 bits (101), Expect = 1e-04
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 10/179 (5%)
Query: 5 LQLVPAKLLNSSCSLEK-TLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLG 63
++ P LL S C+ + T+QC C P PSV + + V V+ + V S G
Sbjct: 409 VEFAPVLLLESHCAAARDTVQCLCVVKSNPEPSVAFELPSRNVTVNESEREF-VYSERSG 467
Query: 64 PWANSTISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAG 123
S ++L + + R++C +N G +L + + A+ G + A
Sbjct: 468 LVLTSILTLRGQAQAPPRVICTARNLYGAKSLELPFQGAHRLMWAKI-------GPVGAV 520
Query: 124 IVIALLFLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELEMSLKPEEPGKPVVAT 182
+ A+L + ++ I + RKK ++ + A + V S + +S PE+ V+T
Sbjct: 521 VAFAIL-IAIVCYITQTRRKKNVTESPSFSAGDNPPVLFSSDFRISGAPEKYESKEVST 578
>gi|11225258 myelin associated glycoprotein isoform a precursor
[Homo sapiens]
Length = 626
Score = 42.7 bits (99), Expect = 2e-04
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 5 LQLVPAKLLNSSCSLEK-TLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLG 63
++ P LL S C+ + T+QC C P PSV + + V V+ + V S G
Sbjct: 409 VEFAPVLLLESHCAAARDTVQCLCVVKSNPEPSVAFELPSRNVTVNESEREF-VYSERSG 467
Query: 64 PWANSTISLTEEPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAG 123
S ++L + + R++C +N G +L + + A+ G + A
Sbjct: 468 LVLTSILTLRGQAQAPPRVICTARNLYGAKSLELPFQGAHRLMWAKI-------GPVGAV 520
Query: 124 IVIALLFLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELEMSLKPEE 174
+ A+L + ++ I + RKK ++ + A + V S + +S PE+
Sbjct: 521 VAFAIL-IAIVCYITQTRRKKNVTESPSFSAGDNPPVLFSSDFRISGAPEK 570
>gi|68163411 activated leukocyte cell adhesion molecule [Homo
sapiens]
Length = 583
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 20/158 (12%)
Query: 19 LEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTI--SLTEEP 76
L KT+ C G P P++QW + G GS+ + T P+ N + P
Sbjct: 429 LSKTI--ICHVEGFPKPAIQWTITG--------SGSV-INQTEESPYINGRYYSKIIISP 477
Query: 77 EMGMRLLCEGKNQ-------NGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALL 129
E + L C +NQ A+SI ++ + K Q + GIV+ LL
Sbjct: 478 EENVTLTCTAENQLERTVNSLNVSAISIPEHDEADEISDENREKVNDQAKLIVGIVVGLL 537
Query: 130 FLCLLPLIVKHIRKKQAKKAAAIRAKKSSKVRASQELE 167
L+ +V + K++K A+ K + +++LE
Sbjct: 538 LAALVAGVVYWLYMKKSKTASKHVNKDLGNMEENKKLE 575
>gi|121114304 fms-related tyrosine kinase 3 [Homo sapiens]
Length = 993
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 24 QCSCSFHGIPTPSVQWWMGG---------VPVGVDGMDGSLQVTSTMLGPWANSTISLTE 74
Q SC G P PS W + GV + +V G W +S+
Sbjct: 449 QASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKV----FGQWVSSSTLNMS 504
Query: 75 EPEMGMRLLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALLFLCLL 134
E G + C N GT +ILL +S F++ I + YA I + LLF+ +L
Sbjct: 505 EAIKGFLVKCCAYNSLGTSCETILL----NSPGPFPFIQDNI--SFYATIGVCLLFIVVL 558
Query: 135 PLIVKHIRKKQ 145
L++ H KKQ
Sbjct: 559 TLLICHKYKKQ 569
>gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]
Length = 499
Score = 38.1 bits (87), Expect = 0.005
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 22/138 (15%)
Query: 21 KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGM 80
++L+ C+ + P + W G S L P +S L E P + +
Sbjct: 277 QSLRLVCAVNSNPPARLSWTRG----------------SLTLCPSRSSNPGLLELPRVHV 320
Query: 81 R----LLCEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALLFL--CLL 134
R C +N G+ +S+ L + V + A+ AL FL C++
Sbjct: 321 RDEGEFTCRAQNAQGSQHISLSLSLQNEGTGTSRPVSQVTLAAVGGAGATALAFLSFCII 380
Query: 135 PLIVKHIRKKQAKKAAAI 152
+IV+ RKK A+ AA +
Sbjct: 381 FIIVRSCRKKSARPAAGV 398
>gi|16506826 sialic acid binding immunoglobulin-like lectin-like
protein 1 isoform b precursor [Homo sapiens]
Length = 477
Score = 37.7 bits (86), Expect = 0.006
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 59 STMLGPWANSTISLTEEPEMGMR----LLCEGKNQNGTHALSILLMSRKSSLAAQAFVKG 114
S L P +S + + E P + ++ C +N G+ +S+ L + + G
Sbjct: 299 SLTLSPSQSSNLGVLELPRVHVKDEGEFTCRAQNPLGSQHISLSLSLQNEYTGKMRPISG 358
Query: 115 LIQGAIYAGIVIALLFL--CLLPLIVKHIRKKQAKKAAAI 152
+ GA AL+FL C++ ++V+ RKK A+ A +
Sbjct: 359 VTLGAFGGAGATALVFLYFCIIFVVVRSCRKKSARPAVGV 398
>gi|16506828 sialic acid binding immunoglobulin-like lectin-like
protein 1 isoform a precursor [Homo sapiens]
Length = 595
Score = 37.7 bits (86), Expect = 0.006
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 59 STMLGPWANSTISLTEEPEMGMR----LLCEGKNQNGTHALSILLMSRKSSLAAQAFVKG 114
S L P +S + + E P + ++ C +N G+ +S+ L + + G
Sbjct: 417 SLTLSPSQSSNLGVLELPRVHVKDEGEFTCRAQNPLGSQHISLSLSLQNEYTGKMRPISG 476
Query: 115 LIQGAIYAGIVIALLFL--CLLPLIVKHIRKKQAKKAAAI 152
+ GA AL+FL C++ ++V+ RKK A+ A +
Sbjct: 477 VTLGAFGGAGATALVFLYFCIIFVVVRSCRKKSARPAVGV 516
>gi|118197279 sialic acid binding Ig-like lectin 7 isoform 2 [Homo
sapiens]
Length = 374
Score = 37.4 bits (85), Expect = 0.008
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 84 CEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALLFL--CLLPLIVKHI 141
C +N G+ +S+ L ++ V G++ GA+ AL+FL C++ ++V+
Sbjct: 227 CRAQNSLGSQHVSLNLSLQQEYTGKMRPVSGVLLGAVGGAGATALVFLSFCVIFIVVRSC 286
Query: 142 RKKQAKKAA---AIRAKKSSKVRAS 163
RKK A+ AA I K ++ +R S
Sbjct: 287 RKKSARPAADVGDIGMKDANTIRGS 311
>gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo
sapiens]
Length = 467
Score = 37.4 bits (85), Expect = 0.008
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 84 CEGKNQNGTHALSILLMSRKSSLAAQAFVKGLIQGAIYAGIVIALLFL--CLLPLIVKHI 141
C +N G+ +S+ L ++ V G++ GA+ AL+FL C++ ++V+
Sbjct: 320 CRAQNSLGSQHVSLNLSLQQEYTGKMRPVSGVLLGAVGGAGATALVFLSFCVIFIVVRSC 379
Query: 142 RKKQAKKAA---AIRAKKSSKVRAS 163
RKK A+ AA I K ++ +R S
Sbjct: 380 RKKSARPAADVGDIGMKDANTIRGS 404
>gi|61742797 basal cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 588
Score = 35.0 bits (79), Expect = 0.041
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 5 LQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVG 47
L+L K+L S L + +CS HG+PTP+++W P+G
Sbjct: 364 LELSEGKVL--SLPLNSSAVVNCSVHGLPTPALRWTKDSTPLG 404
>gi|31543106 basal cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 628
Score = 35.0 bits (79), Expect = 0.041
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 5 LQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVG 47
L+L K+L S L + +CS HG+PTP+++W P+G
Sbjct: 364 LELSEGKVL--SLPLNSSAVVNCSVHGLPTPALRWTKDSTPLG 404
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 33.5 bits (75), Expect = 0.12
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 12 LLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTIS 71
L N + +L L C GIP P+++W+ G PV G D T + G W ++
Sbjct: 1168 LTNITAALHSPLTLLCEAMGIPPPAIRWFRGEEPVS-PGED-----TYLLAGGWM-LKMT 1220
Query: 72 LTEEPEMGMRLLCEGKNQNG 91
T+E + G+ C N+ G
Sbjct: 1221 QTQEQDSGL-YSCLASNEAG 1239
Score = 30.8 bits (68), Expect = 0.78
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 13 LNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPV 46
LN S +++ C H +P P + WW G P+
Sbjct: 887 LNVSVVANESVALECQSHAMPPPVLSWWKDGRPL 920
Score = 30.4 bits (67), Expect = 1.0
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 22 TLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGMR 81
++Q C G P P + W G+P+ + LQ S TI TE + G R
Sbjct: 3044 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSL--------TIHRTERDDAG-R 3094
Query: 82 LLCEGKNQNGTHALSILLM 100
C +N+ G ++L+
Sbjct: 3095 YQCLAENEMGVAKKVVILV 3113
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 14/49 (28%)
Query: 10 AKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMG--------GVPVGVDG 50
A L N+S +LE C G+P P V W+ G GV V VDG
Sbjct: 705 AVLENASVTLE------CLASGVPPPDVSWFKGHQPVSSWMGVTVSVDG 747
Score = 28.9 bits (63), Expect = 3.0
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 1 MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPV--GVDGMDGSLQVT 58
+LP+ +P + S L L C+ G PTP + W + PV GV DG +
Sbjct: 2936 VLPVFTTLPG---DRSLRLGDRLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQDGGSTLQ 2992
Query: 59 STMLGPWANSTISLTEEPEMGMRLLCEGKNQNG-THALSILLMSRKSSLAAQAF 111
+ + T +C +N+ G T A+S + + L +AF
Sbjct: 2993 RAAVSREDSGT------------YVCWAENRVGRTQAVSFVHVKEAPVLQGEAF 3034
Score = 28.1 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 19 LEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEM 78
+ TL C +P P+++W+ G PV LQV LG I T+ +
Sbjct: 1462 VNSTLTLECESWAVPPPTIRWYKDGQPV---TPSSRLQV----LGEGRLLQIQPTQVSDS 1514
Query: 79 GMRLLCEGKNQNG 91
G R LC N G
Sbjct: 1515 G-RYLCVATNVAG 1526
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 33.5 bits (75), Expect = 0.12
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 12 LLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTIS 71
L N + +L L C GIP P+++W+ G PV G D T + G W ++
Sbjct: 2359 LTNITAALHSPLTLLCEAMGIPPPAIRWFRGEEPVS-PGED-----TYLLAGGWM-LKMT 2411
Query: 72 LTEEPEMGMRLLCEGKNQNG 91
T+E + G+ C N+ G
Sbjct: 2412 QTQEQDSGL-YSCLASNEAG 2430
Score = 30.8 bits (68), Expect = 0.78
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 13 LNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPV 46
LN S +++ C H +P P + WW G P+
Sbjct: 2078 LNVSVVANESVALECQSHAMPPPVLSWWKDGRPL 2111
Score = 30.4 bits (67), Expect = 1.0
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 22 TLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGMR 81
++Q C G P P + W G+P+ + LQ S TI TE + G R
Sbjct: 4235 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSL--------TIHRTERDDAG-R 4285
Query: 82 LLCEGKNQNGTHALSILLM 100
C +N+ G ++L+
Sbjct: 4286 YQCLAENEMGVAKKVVILV 4304
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 14/49 (28%)
Query: 10 AKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMG--------GVPVGVDG 50
A L N+S +LE C G+P P V W+ G GV V VDG
Sbjct: 1896 AVLENASVTLE------CLASGVPPPDVSWFKGHQPVSSWMGVTVSVDG 1938
Score = 28.9 bits (63), Expect = 3.0
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 1 MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPV--GVDGMDGSLQVT 58
+LP+ +P + S L L C+ G PTP + W + PV GV DG +
Sbjct: 4127 VLPVFTTLPG---DRSLRLGDRLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQDGGSTLQ 4183
Query: 59 STMLGPWANSTISLTEEPEMGMRLLCEGKNQNG-THALSILLMSRKSSLAAQAF 111
+ + T +C +N+ G T A+S + + L +AF
Sbjct: 4184 RAAVSREDSGT------------YVCWAENRVGRTQAVSFVHVKEAPVLQGEAF 4225
Score = 28.1 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 19 LEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEM 78
+ TL C +P P+++W+ G PV LQV LG I T+ +
Sbjct: 2653 VNSTLTLECESWAVPPPTIRWYKDGQPV---TPSSRLQV----LGEGRLLQIQPTQVSDS 2705
Query: 79 GMRLLCEGKNQNG 91
G R LC N G
Sbjct: 2706 G-RYLCVATNVAG 2717
Score = 27.7 bits (60), Expect = 6.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 4 LLQLVPAKLLNSSCSLE------KTLQCSCSFHGIPTPSVQWWMGGVPV 46
LL L P +L + + E ++ C G+PTP V+W PV
Sbjct: 1401 LLVLTPPSVLGAGAAQEVLGLAGADVELQCWTSGVPTPQVEWTKDRQPV 1449
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 33.5 bits (75), Expect = 0.12
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 12 LLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTIS 71
L N + +L L C GIP P+++W+ G PV G D T + G W ++
Sbjct: 1077 LTNITAALHSPLTLLCEAMGIPPPAIRWFRGEEPVS-PGED-----TYLLAGGWM-LKMT 1129
Query: 72 LTEEPEMGMRLLCEGKNQNG 91
T+E + G+ C N+ G
Sbjct: 1130 QTQEQDSGL-YSCLASNEAG 1148
Score = 30.8 bits (68), Expect = 0.78
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 13 LNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPV 46
LN S +++ C H +P P + WW G P+
Sbjct: 796 LNVSVVANESVALECQSHAMPPPVLSWWKDGRPL 829
Score = 30.4 bits (67), Expect = 1.0
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 22 TLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGMR 81
++Q C G P P + W G+P+ + LQ S TI TE + G R
Sbjct: 2953 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSL--------TIRRTERDDAG-R 3003
Query: 82 LLCEGKNQNGTHALSILLM 100
C +N+ G ++L+
Sbjct: 3004 YQCLAENEMGVAKKVVILV 3022
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 14/49 (28%)
Query: 10 AKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMG--------GVPVGVDG 50
A L N+S +LE C G+P P V W+ G GV V VDG
Sbjct: 614 AVLENASVTLE------CLASGVPPPDVSWFKGHQPVSSWMGVTVSVDG 656
Score = 28.9 bits (63), Expect = 3.0
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 1 MLPLLQLVPAKLLNSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPV--GVDGMDGSLQVT 58
+LP+ +P + S L L C+ G PTP + W + PV GV DG +
Sbjct: 2845 VLPVFTTLPG---DRSLRLGDRLWLRCAARGSPTPRIGWTVNDRPVTEGVSEQDGGSTLQ 2901
Query: 59 STMLGPWANSTISLTEEPEMGMRLLCEGKNQNG-THALSILLMSRKSSLAAQAF 111
+ + T +C +N+ G T A+S + + L +AF
Sbjct: 2902 RAAVSREDSGT------------YVCWAENRVGRTQAVSFVHVKEAPVLQGEAF 2943
Score = 28.1 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 19 LEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEM 78
+ TL C +P P+++W+ G PV LQV LG I T+ +
Sbjct: 1371 VNSTLTLECESWAVPPPTIRWYKDGQPV---TPSSRLQV----LGEGRLLQIQPTQVSDS 1423
Query: 79 GMRLLCEGKNQNG 91
G R LC N G
Sbjct: 1424 G-RYLCVATNVAG 1435
Score = 27.7 bits (60), Expect = 6.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 4 LLQLVPAKLLNSSCSLE------KTLQCSCSFHGIPTPSVQWWMGGVPV 46
LL L P +L + + E ++ C G+PTP V+W PV
Sbjct: 119 LLVLTPPSVLGAGAAQEVLGLAGADVELQCWTSGVPTPQVEWTKDRQPV 167
>gi|23943856 sialic acid binding Ig-like lectin 9 [Homo sapiens]
Length = 463
Score = 32.3 bits (72), Expect = 0.27
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 54 SLQVTSTMLGPWANSTISLTEEPEMGMR----LLCEGKNQNGTHA--LSILLMSRKSSLA 107
SL L P S + E P + +R C +N G+ L++ L S+ +S
Sbjct: 286 SLSWRGLTLCPSQPSNPGVLELPWVHLRDAAEFTCRAQNPLGSQQVYLNVSLQSKATS-- 343
Query: 108 AQAFVKGLIQGAIYAGIVIALLFL--CLLPLIVKHIRKKQAKKAAAI 152
G+ QG + AL+FL C++ ++V+ RKK A+ AA +
Sbjct: 344 ------GVTQGVVGGAGATALVFLSFCVIFVVVRSCRKKSARPAAGV 384
>gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo
sapiens]
Length = 1248
Score = 32.0 bits (71), Expect = 0.35
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 21 KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGM 80
+T + C G P P V W + G+PV D ++ L I +P M
Sbjct: 343 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGAL-------ILSNVQPSDTM 395
Query: 81 RLLCEGKNQNG 91
CE +N++G
Sbjct: 396 VTQCEARNRHG 406
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 14/72 (19%)
Query: 8 VPAKLLNSSCSLEKTLQCS-----CSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTML 62
+PAK+L + +Q S C G P PSVQW DG+ +
Sbjct: 419 LPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL---------DEDGTTVLQDERF 469
Query: 63 GPWANSTISLTE 74
P+AN T+ + +
Sbjct: 470 FPYANGTLGIRD 481
>gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 1253
Score = 32.0 bits (71), Expect = 0.35
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 21 KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGM 80
+T + C G P P V W + G+PV D ++ L I +P M
Sbjct: 348 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGAL-------ILSNVQPSDTM 400
Query: 81 RLLCEGKNQNG 91
CE +N++G
Sbjct: 401 VTQCEARNRHG 411
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 14/72 (19%)
Query: 8 VPAKLLNSSCSLEKTLQCS-----CSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTML 62
+PAK+L + +Q S C G P PSVQW DG+ +
Sbjct: 424 LPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL---------DEDGTTVLQDERF 474
Query: 63 GPWANSTISLTE 74
P+AN T+ + +
Sbjct: 475 FPYANGTLGIRD 486
>gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 1257
Score = 32.0 bits (71), Expect = 0.35
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 21 KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGM 80
+T + C G P P V W + G+PV D ++ L I +P M
Sbjct: 348 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGAL-------ILSNVQPSDTM 400
Query: 81 RLLCEGKNQNG 91
CE +N++G
Sbjct: 401 VTQCEARNRHG 411
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 14/72 (19%)
Query: 8 VPAKLLNSSCSLEKTLQCS-----CSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTML 62
+PAK+L + +Q S C G P PSVQW DG+ +
Sbjct: 424 LPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL---------DEDGTTVLQDERF 474
Query: 63 GPWANSTISLTE 74
P+AN T+ + +
Sbjct: 475 FPYANGTLGIRD 486
>gi|222352127 sidekick 2 [Homo sapiens]
Length = 2172
Score = 31.6 bits (70), Expect = 0.46
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 16 SCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGM-------DGSLQVT 58
+ +EK + C G+P PS+ W+ V V+ + DG LQ++
Sbjct: 319 TAEMEKVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQIS 368
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 31.6 bits (70), Expect = 0.46
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 21 KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQV 57
+T++ C GIP P V W++ G P V +GS++V
Sbjct: 429 QTVKFRCEVSGIPKPEVAWFLEGTP--VRRQEGSIEV 463
Score = 31.2 bits (69), Expect = 0.60
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 23/93 (24%)
Query: 26 SCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGMRLL-C 84
SC G P P V W G VP L P A ++S + GM++L
Sbjct: 181 SCKITGRPQPQVTWLKGNVP----------------LQPSARVSVS----EKNGMQVLEI 220
Query: 85 EGKNQN--GTHALSILLMSRKSSLAAQAFVKGL 115
G NQ+ G + ++ S K+S++A+ ++GL
Sbjct: 221 HGVNQDDVGVYTCLVVNGSGKASMSAELSIQGL 253
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 31.6 bits (70), Expect = 0.46
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 21 KTLQCSCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQV 57
+T++ C GIP P V W++ G P V +GS++V
Sbjct: 429 QTVKFRCEVSGIPKPEVAWFLEGTP--VRRQEGSIEV 463
Score = 31.2 bits (69), Expect = 0.60
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 23/93 (24%)
Query: 26 SCSFHGIPTPSVQWWMGGVPVGVDGMDGSLQVTSTMLGPWANSTISLTEEPEMGMRLL-C 84
SC G P P V W G VP L P A ++S + GM++L
Sbjct: 181 SCKITGRPQPQVTWLKGNVP----------------LQPSARVSVS----EKNGMQVLEI 220
Query: 85 EGKNQN--GTHALSILLMSRKSSLAAQAFVKGL 115
G NQ+ G + ++ S K+S++A+ ++GL
Sbjct: 221 HGVNQDDVGVYTCLVVNGSGKASMSAELSIQGL 253
>gi|169217528 PREDICTED: similar to sidekick homolog 2 (chicken)
[Homo sapiens]
Length = 399
Score = 31.6 bits (70), Expect = 0.46
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 16 SCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVGVDGM-------DGSLQVT 58
+ +EK + C G+P PS+ W+ V V+ + DG LQ++
Sbjct: 131 TAEMEKVVDIPCQAKGVPPPSITWYKDAAVVEVEKLTRFRQRNDGGLQIS 180
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 31.2 bits (69), Expect = 0.60
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 8 VPAKL--LNSSCSLE--KTLQCSCSFHGIPTPSVQWWMGG 43
+P K+ L S S++ K L +C+F G PTP V W GG
Sbjct: 33327 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG 33366
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 31.2 bits (69), Expect = 0.60
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 8 VPAKL--LNSSCSLE--KTLQCSCSFHGIPTPSVQWWMGG 43
+P K+ L S S++ K L +C+F G PTP V W GG
Sbjct: 27022 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG 27061
Score = 28.1 bits (61), Expect = 5.0
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 14 NSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVG--------VDGMDGSLQVTSTML 62
N+ S+ S + GIP P +QW+ GV + DG D SL + T L
Sbjct: 3657 NADISMGDVATLSVTVIGIPKPKIQWFFNGVLLTPSADYKFVFDGDDHSLIILFTKL 3713
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 31.2 bits (69), Expect = 0.60
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 8 VPAKL--LNSSCSLE--KTLQCSCSFHGIPTPSVQWWMGG 43
+P K+ L S S++ K L +C+F G PTP V W GG
Sbjct: 26955 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG 26994
Score = 28.1 bits (61), Expect = 5.0
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 14 NSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVG--------VDGMDGSLQVTSTML 62
N+ S+ S + GIP P +QW+ GV + DG D SL + T L
Sbjct: 3590 NADISMGDVATLSVTVIGIPKPKIQWFFNGVLLTPSADYKFVFDGDDHSLIILFTKL 3646
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 31.2 bits (69), Expect = 0.60
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 8 VPAKL--LNSSCSLE--KTLQCSCSFHGIPTPSVQWWMGG 43
+P K+ L S S++ K L +C+F G PTP V W GG
Sbjct: 26830 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGG 26869
Score = 28.1 bits (61), Expect = 5.0
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
Query: 14 NSSCSLEKTLQCSCSFHGIPTPSVQWWMGGVPVG--------VDGMDGSLQVTSTML 62
N+ S+ S + GIP P +QW+ GV + DG D SL + T L
Sbjct: 3465 NADISMGDVATLSVTVIGIPKPKIQWFFNGVLLTPSADYKFVFDGDDHSLIILFTKL 3521
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,097,237
Number of Sequences: 37866
Number of extensions: 285294
Number of successful extensions: 1658
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1256
Number of HSP's gapped (non-prelim): 440
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.