Guide to the Human Genome
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Name: C10orf91 Sequence: fasta or formatted (145aa) NCBI GI: 27734915
Description:

hypothetical protein LOC170393

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         18           2
 C cysteine            0.7          1           1
 D aspartate           3.4          5           1
 E glutamate           4.1          6           1
 F phenylalanine       3.4          5           1
 G glycine             8.3         12           1
 H histidine           2.8          4           1
 I isoleucine          1.4          2           1
 K lysine              0.7          1           1
 L leucine             6.2          9           1
 M methionine          1.4          2           1
 N asparagine          0.7          1           1
 P proline            11.0         16           2
 Q glutamine           9.0         13           1
 R arginine            6.9         10           1
 S serine             13.8         20           2
 T threonine           5.5          8           2
 V valine              4.8          7           2
 W tryptophan          2.8          4           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC170393 
LOC100291634          0.040   PREDICTED: hypothetical protein XP_002346062 
LOC654055             0.040   PREDICTED: similar to signal-regulatory protein alp...
LOC100291096          0.040   PREDICTED: hypothetical protein XP_002346952 
LOC100287232          0.040   PREDICTED: hypothetical protein XP_002342816 
LOC100287232          0.040   PREDICTED: hypothetical protein 
SIRPB1                0.040   signal-regulatory protein beta 1 isoform 3 precurso...
BSN                   0.040   bassoon protein 
HCN4                  0.036   hyperpolarization activated cyclic nucleotide-gated p...
MUC7                  0.036   mucin 7, secreted precursor 
MUC7                  0.036   mucin 7, secreted precursor 
MUC7                  0.036   mucin 7, secreted precursor 
NOTO                  0.036   notochord homeobox 
POU6F2                0.036   POU domain, class 6, transcription factor 2 
ZNF414                0.033   zinc finger protein 414 isoform 1 
LOC100129103          0.033   PREDICTED: similar to hCG2038970 
LOC729378             0.033   PREDICTED: hypothetical protein 
LOC100129103          0.033   PREDICTED: similar to hCG2038970 
LOC729378             0.033   PREDICTED: hypothetical protein 
LOC100129103          0.033   PREDICTED: similar to hCG2038970 
LOC729378             0.033   PREDICTED: hypothetical protein 
LOC100288135          0.029   PREDICTED: hypothetical protein XP_002343736 
SGSM2                 0.029   RUN and TBC1 domain containing 1 isoform 2 
SGSM2                 0.029   RUN and TBC1 domain containing 1 isoform 1 
CREBBP                0.029   CREB binding protein isoform b 
CREBBP                0.029   CREB binding protein isoform a 
MICALL2               0.029   MICAL-like 2 isoform 1 
CACNA1B               0.026   calcium channel, voltage-dependent, N type, alpha 1B ...
ATXN2L                0.026   ataxin 2 related protein isoform B 
ATXN2L                0.026   ataxin 2 related protein isoform E 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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