PGBD5 24168

Name: PGBD5	Sequence: fasta or formatted (554aa)		NCBI GI: 25777748
Description: piggyBac transposable element derived 5		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 33 2 C cysteine 2.5 14 2 D aspartate 3.4 19 2 E glutamate 4.7 26 2 F phenylalanine 5.2 29 2 G glycine 6.3 35 3 H histidine 2.5 14 1 I isoleucine 4.9 27 2 K lysine 6.0 33 2 L leucine 9.7 54 2 M methionine 2.3 13 1 N asparagine 2.9 16 2 P proline 6.5 36 3 Q glutamine 4.9 27 2 R arginine 5.8 32 1 S serine 10.3 57 3 T threonine 5.1 28 2 V valine 5.6 31 2 W tryptophan 1.6 9 1 Y tyrosine 3.8 21 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 piggyBac transposable element derived 5 PGBD4 0.042 piggyBac transposable element derived 4 PGBD3 0.029 hypothetical protein LOC267004 PGBD2 0.027 hypothetical protein LOC267002 isoform a PGBD1 0.024 piggyBac transposable element derived 1 PGBD2 0.012 hypothetical protein LOC267002 isoform b UBE4B 0.008 ubiquitination factor E4B isoform 1 RYR1 0.007 skeletal muscle ryanodine receptor isoform 2 RYR1 0.007 skeletal muscle ryanodine receptor isoform 1 VPS37B 0.006 vacuolar protein sorting 37B TMEM132A 0.005 transmembrane protein 132A isoform a TMEM132A 0.005 transmembrane protein 132A isoform b HIP1 0.005 huntingtin interacting protein 1 STARD9 0.005 PREDICTED: StAR-related lipid transfer (START) doma... LOC100292722 0.005 PREDICTED: hypothetical protein STARD9 0.005 PREDICTED: StAR-related lipid transfer (START) doma... STARD9 0.005 PREDICTED: StAR-related lipid transfer (START) doma... CCDC155 0.005 coiled-coil domain containing 155 KNDC1 0.005 kinase non-catalytic C-lobe domain (KIND) containin... DNAH5 0.005 dynein, axonemal, heavy chain 5 MBOAT4 0.005 membrane bound O-acyltransferase domain containing ... SLC6A19 0.004 solute carrier family 6, member 19 AKNA 0.004 AT-hook transcription factor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.