PGBD2 24165

Name: PGBD2	Sequence: fasta or formatted (592aa)		NCBI GI: 25777742
Description: hypothetical protein LOC267002 isoform a		Referenced in: DNA Transposon and Retrovirus-related Sequences
Other entries for this name: alt prot [341aa] hypothetical protein LOC267002 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 35 2 C cysteine 2.7 16 2 D aspartate 6.1 36 2 E glutamate 6.9 41 4 F phenylalanine 4.7 28 2 G glycine 6.2 37 2 H histidine 3.5 21 3 I isoleucine 5.7 34 2 K lysine 6.8 40 2 L leucine 7.8 46 2 M methionine 1.9 11 1 N asparagine 3.7 22 3 P proline 3.4 20 2 Q glutamine 3.7 22 1 R arginine 8.1 48 3 S serine 7.6 45 2 T threonine 4.4 26 2 V valine 6.1 36 2 W tryptophan 1.7 10 1 Y tyrosine 3.0 18 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC267002 isoform a PGBD2 0.578 hypothetical protein LOC267002 isoform b PGBD1 0.420 piggyBac transposable element derived 1 PGBD3 0.372 hypothetical protein LOC267004 PGBD4 0.060 piggyBac transposable element derived 4 PGBD5 0.025 piggyBac transposable element derived 5 IWS1 0.006 IWS1 homolog DAXX 0.006 death-domain associated protein isoform a DAXX 0.006 death-domain associated protein isoform a DAXX 0.006 death-domain associated protein isoform b SETD1B 0.006 SET domain containing 1B RGAG4 0.005 retrotransposon gag domain containing 4 ZMYND10 0.004 zinc finger, MYND domain-containing 10 SGOL1 0.004 shugoshin-like 1 isoform A1 SGOL1 0.004 shugoshin-like 1 isoform A2 RAD54L2 0.004 RAD54-like 2 SIAH2 0.004 seven in absentia homolog 2 ARPP-21 0.004 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.