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Search of human proteins with 25188193
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
(213 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 431 e-121
gi|39930371 RAB39, member RAS oncogene family [Homo sapiens] 348 2e-96
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 183 1e-46
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 182 1e-46
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 175 2e-44
gi|16933567 mel transforming oncogene [Homo sapiens] 174 5e-44
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 170 9e-43
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 167 5e-42
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 167 5e-42
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 167 5e-42
gi|19923483 GTPase Rab14 [Homo sapiens] 166 1e-41
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens] 161 4e-40
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 159 2e-39
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 159 2e-39
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 157 8e-39
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 156 1e-38
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 156 1e-38
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 154 5e-38
gi|50234889 RAB43 protein [Homo sapiens] 154 7e-38
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 153 9e-38
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 150 1e-36
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 147 9e-36
gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 146 1e-35
gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 146 1e-35
gi|34485706 Ras-related protein Rab-27A [Homo sapiens] 146 1e-35
gi|19923264 Ras-related protein Rab-27A [Homo sapiens] 146 1e-35
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 146 1e-35
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 144 6e-35
gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens] 143 1e-34
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 142 2e-34
>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
Length = 213
Score = 431 bits (1107), Expect = e-121
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
Sbjct: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
Query: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL
Sbjct: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
Query: 121 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI 180
VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI
Sbjct: 121 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI 180
Query: 181 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC 213
TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
Sbjct: 181 TIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC 213
>gi|39930371 RAB39, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 348 bits (893), Expect = 2e-96
Identities = 167/217 (76%), Positives = 192/217 (88%), Gaps = 4/217 (1%)
Query: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRF----AQVSDPTVGVDFFSRLVEIEPGK 56
ME IW+YQFRLIVIGDSTVGKSCL+ RFT+GRF + DPTVGVDFFSRL+EIEPGK
Sbjct: 1 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK 60
Query: 57 RIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQI 116
RIKLQ+WDTAGQERFRSITR+YYRNSVGG L+FDITNRRSF++V +WLEE K++VQP++I
Sbjct: 61 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI 120
Query: 117 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVK 176
VF+LVGHKCDL +QRQVTR EAEKL+A GMKYIETSA+DA NVE++FT LTRDIYEL+K
Sbjct: 121 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK 180
Query: 177 RGEITIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC 213
+GEI IQ+GWEGVKSGFVPN VHSSEE VK + C C
Sbjct: 181 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC 217
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 183 bits (464), Expect = 1e-46
Identities = 89/188 (47%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Query: 5 WLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWD 64
+ Y F+ I+IGD+ VGKSCL+ +FT+ RF V D T+GV+F +R+V I+ GK+IKLQIWD
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNID-GKQIKLQIWD 61
Query: 65 TAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHK 124
TAGQE FRSITR+YYR + G LL++DIT R +F ++ WLE+ + H +V +L+G+K
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH-SSSNMVIMLIGNK 120
Query: 125 CDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
DL+++R V R E E A +G+ ++ETSA+ A NVE+AF + ++IY +++G +
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 185 GWEGVKSG 192
G+K G
Sbjct: 181 EANGIKIG 188
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 182 bits (463), Expect = 1e-46
Identities = 89/188 (47%), Positives = 133/188 (70%), Gaps = 2/188 (1%)
Query: 5 WLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWD 64
+ Y F+ I+IGD+ VGKSCL+ +FT+ RF V D T+GV+F +R++ I+ GK+IKLQIWD
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-GKQIKLQIWD 61
Query: 65 TAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHK 124
TAGQE FRSITR+YYR + G LL++DIT R +F ++ WLE+ + H +V +L+G+K
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNS-NMVIMLIGNK 120
Query: 125 CDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQE 184
DL+++R+V + E E A +G+ ++ETSA+ A NVE+AF + ++IYE ++ G I
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GWEGVKSG 192
G+K G
Sbjct: 181 EANGIKIG 188
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 175 bits (444), Expect = 2e-44
Identities = 84/171 (49%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F+L++IGDS VGK+CL+ RF+E F T+G+DF R +E++ GK+IKLQIWDTA
Sbjct: 7 YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELD-GKKIKLQIWDTA 65
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR+IT AYYR ++G +L++DITN +SF N+ W+ + H + +++G+KCD
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASS-DVERMILGNKCD 124
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKR 177
++ +RQV++ EKLA YG+K++ETSA+ + NVE+AF L RDI + R
Sbjct: 125 MNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNR 175
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 174 bits (441), Expect = 5e-44
Identities = 84/165 (50%), Positives = 120/165 (72%), Gaps = 2/165 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F+L++IGDS VGK+C++ RF+E F T+G+DF R +E++ GKRIKLQIWDTA
Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD-GKRIKLQIWDTA 65
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR+IT AYYR ++G +L++DITN +SF N+ W+ + H + +++G+KCD
Sbjct: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEKMILGNKCD 124
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
++ +RQV++ EKLA YG+K++ETSA+ INVE AF L RDI
Sbjct: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 170 bits (430), Expect = 9e-43
Identities = 82/170 (48%), Positives = 127/170 (74%), Gaps = 4/170 (2%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
F+L++IGDS VGK+CLI RF E F T+G+DF R V+IE GK+IKLQ+WDTAGQ
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKLQVWDTAGQ 67
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERF++IT AYYR ++G +L++DIT+ +SF+N+ W++ K + + +L+G+KCD++
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA-GVERLLLGNKCDME 126
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRG 178
+R+V + +A+KLA +G+++ ETSA+ ++NV++AF+ L RDI L+K G
Sbjct: 127 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSG 174
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 167 bits (424), Expect = 5e-42
Identities = 81/170 (47%), Positives = 125/170 (73%), Gaps = 4/170 (2%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
F+L++IGDS VGK+CLI RF E F T+G+DF R V+IE GK+IKLQ+WDTAGQ
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKLQVWDTAGQ 191
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERF++IT AYYR ++G +L +DIT+ +SF+N+ W++ + + +L+G+KCD++
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA-GVEHLLLGNKCDME 250
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRG 178
+R+V + +A+KLA +G+++ ETSA+ ++NV++AF+ L RDI L+K G
Sbjct: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSG 298
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 167 bits (424), Expect = 5e-42
Identities = 81/170 (47%), Positives = 125/170 (73%), Gaps = 4/170 (2%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
F+L++IGDS VGK+CLI RF E F T+G+DF R V+IE GK+IKLQ+WDTAGQ
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKLQVWDTAGQ 191
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERF++IT AYYR ++G +L +DIT+ +SF+N+ W++ + + +L+G+KCD++
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA-GVEHLLLGNKCDME 250
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRG 178
+R+V + +A+KLA +G+++ ETSA+ ++NV++AF+ L RDI L+K G
Sbjct: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSG 298
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 167 bits (424), Expect = 5e-42
Identities = 81/170 (47%), Positives = 125/170 (73%), Gaps = 4/170 (2%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
F+L++IGDS VGK+CLI RF E F T+G+DF R V+IE GK+IKLQ+WDTAGQ
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKLQVWDTAGQ 191
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERF++IT AYYR ++G +L +DIT+ +SF+N+ W++ + + +L+G+KCD++
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA-GVEHLLLGNKCDME 250
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRG 178
+R+V + +A+KLA +G+++ ETSA+ ++NV++AF+ L RDI L+K G
Sbjct: 251 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSG 298
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 166 bits (420), Expect = 1e-41
Identities = 79/184 (42%), Positives = 123/184 (66%), Gaps = 2/184 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F+ I+IGD VGKSCL+ +FTE +F T+GV+F +R++E+ G++IKLQIWDTA
Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS-GQKIKLQIWDTA 68
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR++TR+YYR + G L+++DIT R ++ ++ WL + + P V +L+G+K D
Sbjct: 69 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP-NTVIILIGNKAD 127
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGW 186
L+ QR VT EA++ A G+ ++E SA+ NVE AF + + IY+ ++ G + +
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAE 187
Query: 187 EGVK 190
GV+
Sbjct: 188 SGVQ 191
>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
Length = 213
Score = 161 bits (407), Expect = 4e-40
Identities = 82/186 (44%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
+ F+ +VIG + GKSCL+ +F E +F Q S+ T+GV+F SR+V + GK +KLQIWDTA
Sbjct: 7 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVG-GKTVKLQIWDTA 65
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFRS+TR+YYR + G LL++DIT+R ++ ++ WL + + P IV +L G+K D
Sbjct: 66 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP-NIVVILCGNKKD 124
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGW 186
LD +R+VT EA + A + ++ETSA NVE+AF R I + GE+ +
Sbjct: 125 LDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 184
Query: 187 EGVKSG 192
G++ G
Sbjct: 185 SGIQYG 190
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 159 bits (402), Expect = 2e-39
Identities = 82/174 (47%), Positives = 116/174 (66%), Gaps = 2/174 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F++++IGDS VGKS L+ RFT F S T+GV+F +R ++++ GK IK QIWDTA
Sbjct: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKTIKAQIWDTA 68
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQER+R+IT AYYR +VG LL++DI +++NV WL+E + H IV +LVG+K D
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS-NIVIMLVGNKSD 127
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI 180
L R V EA A + +IETSA D+ NVE+AF ++ +IY +V + +I
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 159 bits (402), Expect = 2e-39
Identities = 82/175 (46%), Positives = 116/175 (66%), Gaps = 2/175 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F++++IGDS VGKS L+ RFT F S T+GV+F +R ++++ GK IK QIWDTA
Sbjct: 10 YLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKTIKAQIWDTA 68
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQER+R+IT AYYR +VG LL++DI +++NV WL+E + H IV +LVG+K D
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS-NIVIMLVGNKSD 127
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEIT 181
L R V EA A G+ +IETSA D+ NVE AF + +IY +V + +++
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 157 bits (396), Expect = 8e-39
Identities = 75/163 (46%), Positives = 116/163 (71%), Gaps = 2/163 (1%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
F+L++IGDS VGK+C++ RF++ F T+G+DF + VE++ GK+IKLQIWDTAGQ
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ-GKKIKLQIWDTAGQ 68
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERF +IT +YYR ++G +L++DITN +SF+N+ +WL H + +L+G+KCD+D
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE-DVERMLLGNKCDMD 127
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
+R V + + ++A +G+++ ETSA+ IN+EKAF L DI
Sbjct: 128 DKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 156 bits (395), Expect = 1e-38
Identities = 79/192 (41%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 1 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL 60
M + + F+ +VIG++ GKSCL+ +F E +F S+ T+GV+F S+++ + GK +KL
Sbjct: 6 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVG-GKYVKL 64
Query: 61 QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVL 120
QIWDTAGQERFRS+TR+YYR + G LL++DIT+R ++ + WL + ++ + IV +L
Sbjct: 65 QIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARM-LASQNIVIIL 123
Query: 121 VGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEI 180
G+K DLD R+VT EA + A + ++ETSA NVE+AF R I ++ GE+
Sbjct: 124 CGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGEL 183
Query: 181 TIQEGWEGVKSG 192
+ G++ G
Sbjct: 184 DPERMGSGIQYG 195
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 156 bits (395), Expect = 1e-38
Identities = 78/161 (48%), Positives = 117/161 (72%), Gaps = 2/161 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
+ F++++IG++ VGK+CL+RRFT+G F T+GVDF + VEI G+++KLQIWDTA
Sbjct: 8 FLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIN-GEKVKLQIWDTA 66
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFRSIT++YYR++ +L +DIT SF+ + EWL E + + +++ VLVG+K D
Sbjct: 67 GQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS-NKVITVLVGNKID 125
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDL 167
L +R+V++ AE+ + A M Y+ETSA+++ NVEK F DL
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDL 166
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 154 bits (389), Expect = 5e-38
Identities = 74/164 (45%), Positives = 118/164 (71%), Gaps = 3/164 (1%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRF-AQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAG 67
F+++++GDS VGK+CL+ RF +G F A TVG+DF +++++++ G ++KLQ+WDTAG
Sbjct: 64 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVD-GVKVKLQMWDTAG 122
Query: 68 QERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDL 127
QERFRS+T AYYR++ LLL+D+TN+ SF N+ WL E + Q + + +L+G+K D
Sbjct: 123 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ-HDVALMLLGNKVDS 181
Query: 128 DTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
+R V R + EKLA YG+ ++ETSA+ +NV+ AFT + +++
Sbjct: 182 AHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 154 bits (388), Expect = 7e-38
Identities = 77/166 (46%), Positives = 120/166 (72%), Gaps = 3/166 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
+ F+L+++GD++VGK+C+++RF G F++ T+GVDF + +EI+ GKR+KLQIWDTA
Sbjct: 17 FLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQ-GKRVKLQIWDTA 75
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR+IT++YYR++ G +L +DIT R SF +V W+E+ + + IV +L+G+K D
Sbjct: 76 GQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGS-NIVQLLIGNKSD 134
Query: 127 LDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDLTRDI 171
L R+V+ EA+ LA Y + IETSA+D+ NVE+AF + ++
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 153 bits (387), Expect = 9e-38
Identities = 76/165 (46%), Positives = 117/165 (70%), Gaps = 2/165 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F+L++IGDS VGKSCL+ RF + + + T+GVDF R +E++ GK IKLQIWDTA
Sbjct: 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD-GKTIKLQIWDTA 68
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR+IT +YYR + G ++++D+T++ SF NV +WL+E + + +LVG+KCD
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASE-NVNKLLVGNKCD 127
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
L T++ V A++ A + G+ ++ETSA++A NVE++F + +I
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 150 bits (378), Expect = 1e-36
Identities = 75/165 (45%), Positives = 116/165 (70%), Gaps = 2/165 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F+L++IGDS VGKSCL+ RF + + + T+GVDF R +E++ GK IKLQIWDTA
Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD-GKTIKLQIWDTA 65
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR+IT +YYR + G ++++D+T++ S+ NV +WL+E + + +LVG+K D
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASE-NVNKLLVGNKSD 124
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
L T++ V A++ A + G+ ++ETSA++A NVE+AF + +I
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 147 bits (370), Expect = 9e-36
Identities = 73/163 (44%), Positives = 113/163 (69%), Gaps = 3/163 (1%)
Query: 10 RLIVIGDSTVGKSCLIRRFTEGRFAQVS-DPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
+ I++GDS VGK+ L+ +F +G+F S TVG+ F +++V ++ G R+KLQIWDTAGQ
Sbjct: 24 KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVD-GVRVKLQIWDTAGQ 82
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERFRS+T AYYR++ LLL+DITN+ SF N+ WL E + Q +V +L+G+K D+
Sbjct: 83 ERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ-RDVVIMLLGNKADMS 141
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
++R + + E LA YG+ ++ETSA+ +NVE AF + +++
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 146 bits (369), Expect = 1e-35
Identities = 81/212 (38%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP---------GKR 57
Y + + +GDS VGK+ ++ ++T+G+F TVG+DF + V G+R
Sbjct: 8 YLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQR 67
Query: 58 IKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIV 117
I LQ+WDTAGQERFRS+T A++R+++G LLLFD+TN +SF NV W+ + ++H
Sbjct: 68 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD 127
Query: 118 FVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKR 177
VL G+K DL+ QR V EA LA YG+ Y ETSA + N+ +A ++ D+ ++KR
Sbjct: 128 IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAI-EMLLDL--IMKR 184
Query: 178 GEITIQEGWEGVKSGFVPNVVHSSEEVVKSER 209
E + + W + G V + H+S + + E+
Sbjct: 185 MERCVDKSW--IPEGVVRSNGHASTDQLSEEK 214
>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 146 bits (369), Expect = 1e-35
Identities = 81/212 (38%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP---------GKR 57
Y + + +GDS VGK+ ++ ++T+G+F TVG+DF + V G+R
Sbjct: 8 YLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQR 67
Query: 58 IKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIV 117
I LQ+WDTAGQERFRS+T A++R+++G LLLFD+TN +SF NV W+ + ++H
Sbjct: 68 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD 127
Query: 118 FVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKR 177
VL G+K DL+ QR V EA LA YG+ Y ETSA + N+ +A ++ D+ ++KR
Sbjct: 128 IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAI-EMLLDL--IMKR 184
Query: 178 GEITIQEGWEGVKSGFVPNVVHSSEEVVKSER 209
E + + W + G V + H+S + + E+
Sbjct: 185 MERCVDKSW--IPEGVVRSNGHASTDQLSEEK 214
>gi|34485706 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 146 bits (369), Expect = 1e-35
Identities = 81/212 (38%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP---------GKR 57
Y + + +GDS VGK+ ++ ++T+G+F TVG+DF + V G+R
Sbjct: 8 YLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQR 67
Query: 58 IKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIV 117
I LQ+WDTAGQERFRS+T A++R+++G LLLFD+TN +SF NV W+ + ++H
Sbjct: 68 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD 127
Query: 118 FVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKR 177
VL G+K DL+ QR V EA LA YG+ Y ETSA + N+ +A ++ D+ ++KR
Sbjct: 128 IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAI-EMLLDL--IMKR 184
Query: 178 GEITIQEGWEGVKSGFVPNVVHSSEEVVKSER 209
E + + W + G V + H+S + + E+
Sbjct: 185 MERCVDKSW--IPEGVVRSNGHASTDQLSEEK 214
>gi|19923264 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 146 bits (369), Expect = 1e-35
Identities = 81/212 (38%), Positives = 126/212 (59%), Gaps = 14/212 (6%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEP---------GKR 57
Y + + +GDS VGK+ ++ ++T+G+F TVG+DF + V G+R
Sbjct: 8 YLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRGQR 67
Query: 58 IKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIV 117
I LQ+WDTAGQERFRS+T A++R+++G LLLFD+TN +SF NV W+ + ++H
Sbjct: 68 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD 127
Query: 118 FVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKR 177
VL G+K DL+ QR V EA LA YG+ Y ETSA + N+ +A ++ D+ ++KR
Sbjct: 128 IVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAI-EMLLDL--IMKR 184
Query: 178 GEITIQEGWEGVKSGFVPNVVHSSEEVVKSER 209
E + + W + G V + H+S + + E+
Sbjct: 185 MERCVDKSW--IPEGVVRSNGHASTDQLSEEK 214
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 146 bits (369), Expect = 1e-35
Identities = 71/163 (43%), Positives = 114/163 (69%), Gaps = 3/163 (1%)
Query: 10 RLIVIGDSTVGKSCLIRRFTEGRFAQVSD-PTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
+++++GD+ VGK+C + +F +G F + TVG+DF +++V ++ G R+KLQIWDTAGQ
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVD-GVRVKLQIWDTAGQ 89
Query: 69 ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128
ERFRS+T AYYR++ LLL+DITN+ SF N+ WL E + Q +V +L+G+K D+
Sbjct: 90 ERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQ-RDVVIMLLGNKADMS 148
Query: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
++R + + E LA YG+ ++ETSA+ +NVE AF + +++
Sbjct: 149 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 144 bits (363), Expect = 6e-35
Identities = 66/166 (39%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F++I+IGDS VGK+C+++ F G + + T+GVDF R ++I+ GK++K+Q+WDTA
Sbjct: 16 YLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDID-GKKVKMQVWDTA 74
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQERFR+IT++YYR++ ++ +D+T R +F+++ W+ E + + +V +L+G+KCD
Sbjct: 75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKY-GAANVVIMLIGNKCD 133
Query: 127 LDTQRQVTRHEAEKLAAAYG-MKYIETSARDAINVEKAFTDLTRDI 171
L +R V +A LA YG + +ETSA+++ N+E+ F + +++
Sbjct: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
>gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]
Length = 229
Score = 143 bits (360), Expect = 1e-34
Identities = 79/167 (47%), Positives = 107/167 (64%), Gaps = 5/167 (2%)
Query: 9 FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68
F++IVIGDS VGK+CL RF GRF ++ T+GVDF R VEI+ G+RIK+Q+WDTAGQ
Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEID-GERIKIQLWDTAGQ 92
Query: 69 ERFR-SITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDL 127
ERFR S+ + YYRN + ++D+TN SF ++ W+EE K H+ I +LVG+KCDL
Sbjct: 93 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDL 152
Query: 128 DTQRQVTRHEAEKLAAAYGMKYIETSAR---DAINVEKAFTDLTRDI 171
+ QV A+K A + M ETSA+ D +VE F L +
Sbjct: 153 RSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 199
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 142 bits (359), Expect = 2e-34
Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 7/207 (3%)
Query: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Y F++++IG+S+VGK+ + R+ + F TVG+DF + + KRIKLQIWDTA
Sbjct: 21 YMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTI-YRNDKRIKLQIWDTA 79
Query: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
GQER+R+IT AYYR ++G +L++DITN SF V +W + K + V +LVG+KCD
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLVGNKCD 138
Query: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRGEITIQEGW 186
++ +R V+ +LA G ++ E SA+D INV++ F L I E + T
Sbjct: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAV 198
Query: 187 EGVKSGFVPNVVHSSEEVVKSERRCLC 213
G K G P + S++ V + C C
Sbjct: 199 TGAKQG--PQL---SDQQVPPHQDCAC 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,100,823
Number of Sequences: 37866
Number of extensions: 258749
Number of successful extensions: 1102
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 629
Number of HSP's gapped (non-prelim): 250
length of query: 213
length of database: 18,247,518
effective HSP length: 98
effective length of query: 115
effective length of database: 14,536,650
effective search space: 1671714750
effective search space used: 1671714750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.