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Search of human proteins with 120433590
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|120433590 diazepam binding inhibitor isoform 3 [Homo
sapiens]
(87 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens] 181 1e-46
gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens] 177 2e-45
gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens] 176 5e-45
gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo sa... 110 2e-25
gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens] 101 1e-22
gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens] 101 1e-22
gi|89038414 PREDICTED: similar to diazepam binding inhibitor [Ho... 101 1e-22
gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 74 2e-14
gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-14
gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-14
gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-14
gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform ... 73 5e-14
gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform... 73 5e-14
gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo sa... 72 7e-14
gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform... 66 5e-12
gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform... 66 5e-12
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 32 0.11
gi|40807477 retinoic acid induced 1 [Homo sapiens] 31 0.24
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 28 1.2
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 28 2.0
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 28 2.0
>gi|120433590 diazepam binding inhibitor isoform 3 [Homo sapiens]
Length = 87
Score = 181 bits (459), Expect = 1e-46
Identities = 87/87 (100%), Positives = 87/87 (100%)
Query: 1 MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 60
MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN
Sbjct: 1 MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 60
Query: 61 ELKGTSKEDAMKAYINKVEELKKKYGI 87
ELKGTSKEDAMKAYINKVEELKKKYGI
Sbjct: 61 ELKGTSKEDAMKAYINKVEELKKKYGI 87
>gi|10140853 diazepam binding inhibitor isoform 1 [Homo sapiens]
Length = 104
Score = 177 bits (448), Expect = 2e-45
Identities = 84/86 (97%), Positives = 86/86 (100%)
Query: 2 SQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 61
++AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE
Sbjct: 19 TEAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 78
Query: 62 LKGTSKEDAMKAYINKVEELKKKYGI 87
LKGTSKEDAMKAYINKVEELKKKYGI
Sbjct: 79 LKGTSKEDAMKAYINKVEELKKKYGI 104
>gi|120433593 diazepam binding inhibitor isoform 2 [Homo sapiens]
Length = 88
Score = 176 bits (445), Expect = 5e-45
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 4 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 63
AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK
Sbjct: 5 AEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELK 64
Query: 64 GTSKEDAMKAYINKVEELKKKYGI 87
GTSKEDAMKAYINKVEELKKKYGI
Sbjct: 65 GTSKEDAMKAYINKVEELKKKYGI 88
>gi|89886362 acyl-Coenzyme A binding domain containing 7 [Homo
sapiens]
Length = 88
Score = 110 bits (275), Expect = 2e-25
Identities = 53/85 (62%), Positives = 64/85 (75%)
Query: 3 QAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNEL 62
QA+F++AAE+VR LK +P D E+ +YG YKQA VGDIN PGMLD GKAKW+AWN
Sbjct: 4 QADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLK 63
Query: 63 KGTSKEDAMKAYINKVEELKKKYGI 87
KG S EDA AYI+K +EL +KYGI
Sbjct: 64 KGLSTEDATSAYISKAKELIEKYGI 88
>gi|169208924 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 101 bits (251), Expect = 1e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Query: 3 QAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNEL 62
QA+F+ E+VR LKT+P DEE+ +YG YKQA +G+IN E ML+ GKAKW+A N
Sbjct: 4 QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63
Query: 63 KGTSKEDAMKAYINKVEELKKKYGI 87
KG S+ED M+A+I+K EEL +KYGI
Sbjct: 64 KGLSEEDMMRAFISKAEELIEKYGI 88
>gi|89039114 PREDICTED: similar to hCG1652800 [Homo sapiens]
Length = 88
Score = 101 bits (251), Expect = 1e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Query: 3 QAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNEL 62
QA+F+ E+VR LKT+P DEE+ +YG YKQA +G+IN E ML+ GKAKW+A N
Sbjct: 4 QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63
Query: 63 KGTSKEDAMKAYINKVEELKKKYGI 87
KG S+ED M+A+I+K EEL +KYGI
Sbjct: 64 KGLSEEDMMRAFISKAEELIEKYGI 88
>gi|89038414 PREDICTED: similar to diazepam binding inhibitor
[Homo sapiens]
Length = 88
Score = 101 bits (251), Expect = 1e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Query: 3 QAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNEL 62
QA+F+ E+VR LKT+P DEE+ +YG YKQA +G+IN E ML+ GKAKW+A N
Sbjct: 4 QADFDMVTEDVRKLKTRPDDEELKELYGLYKQAVIGNINIECSEMLELKGKAKWEAQNPQ 63
Query: 63 KGTSKEDAMKAYINKVEELKKKYGI 87
KG S+ED M+A+I+K EEL +KYGI
Sbjct: 64 KGLSEEDMMRAFISKAEELIEKYGI 88
>gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo
sapiens]
Length = 364
Score = 74.3 bits (181), Expect = 2e-14
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 2 SQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNE 61
SQ +FE + +V+ LK P +E L +Y YKQAT G N +PG+ D KAKWDAWN
Sbjct: 9 SQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNA 68
Query: 62 LKGTSKEDAMKAYINKVEEL 81
L KE A + Y++ V L
Sbjct: 69 LGSLPKEAARQNYVDLVSSL 88
>gi|209364600 acyl-Coenzyme A binding domain containing 4 isoform
3 [Homo sapiens]
Length = 268
Score = 72.8 bits (177), Expect = 5e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Query: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
WN L S+E+AM AYI +++ + +K
Sbjct: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
>gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform
1 [Homo sapiens]
Length = 341
Score = 72.8 bits (177), Expect = 5e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Query: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
WN L S+E+AM AYI +++ + +K
Sbjct: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
>gi|209364592 acyl-Coenzyme A binding domain containing 4 isoform
2 [Homo sapiens]
Length = 305
Score = 72.8 bits (177), Expect = 5e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Query: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
WN L S+E+AM AYI +++ + +K
Sbjct: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
>gi|13376029 acyl-Coenzyme A binding domain containing 4 isoform 2
[Homo sapiens]
Length = 305
Score = 72.8 bits (177), Expect = 5e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Query: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
WN L S+E+AM AYI +++ + +K
Sbjct: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
>gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform
1 [Homo sapiens]
Length = 341
Score = 72.8 bits (177), Expect = 5e-14
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
Q +F+ A +++L +PS EEML Y +YKQAT+G RPG D G+ KWDA
Sbjct: 13 QKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDA 72
Query: 59 WNELKGTSKEDAMKAYINKVEELKKK 84
WN L S+E+AM AYI +++ + +K
Sbjct: 73 WNSLGKMSREEAMSAYITEMKLVAQK 98
>gi|14150169 acyl-coenzyme A binding domain containing 6 [Homo
sapiens]
Length = 282
Score = 72.4 bits (176), Expect = 7e-14
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 6 FEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGT 65
FEKAA ++ L S E++L++Y YKQ VG+ NT +P DF GK KW+AW L +
Sbjct: 46 FEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDS 105
Query: 66 SKEDAMKAYINKVEEL 81
S AM+ YI V++L
Sbjct: 106 SPSQAMQEYIAVVKKL 121
>gi|109689720 acyl-Coenzyme A binding domain containing 5 isoform
2 [Homo sapiens]
Length = 490
Score = 66.2 bits (160), Expect = 5e-12
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
+ FE A + ++ L +P++E ML Y YKQAT G RPG D G+ KWDA
Sbjct: 9 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 68
Query: 59 WNELKGTSKEDAMKAYINKVEELKK 83
W+ L +KE+AM AY VEE+KK
Sbjct: 69 WSSLGDMTKEEAMIAY---VEEMKK 90
>gi|203098629 acyl-Coenzyme A binding domain containing 5 isoform 1
[Homo sapiens]
Length = 525
Score = 66.2 bits (160), Expect = 5e-12
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 3 QAEFEKAAEEVRHLKT----KPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDA 58
+ FE A + ++ L +P++E ML Y YKQAT G RPG D G+ KWDA
Sbjct: 44 ETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDA 103
Query: 59 WNELKGTSKEDAMKAYINKVEELKK 83
W+ L +KE+AM AY VEE+KK
Sbjct: 104 WSSLGDMTKEEAMIAY---VEEMKK 125
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 20 PSDEEMLFIYGHYKQATVGDINTE---RPGMLDFTGKAKWDAWNELKGTSKEDAMKAYI 75
P+ EE L + +KQ +G N + G D G + W L SKEDAM ++
Sbjct: 104 PTYEEKLKLVALHKQVLMGPYNPDTCPEVGFFDVLGNDRRREWAALGNMSKEDAMVEFV 162
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 30.8 bits (68), Expect = 0.24
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 1 MSQAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWN 60
+S+ + +A+ + + P E++ + G +KQ VG + E G+L AK D W
Sbjct: 779 ISKGDTHEASACLGFQEEDPPGEKVASLPGDFKQEEVGGVKEEAGGLLQCPEVAKADRWL 838
Query: 61 E 61
E
Sbjct: 839 E 839
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 7 EKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPG 46
EK EE+ H+KT+ E+ML Y + Q + T +PG
Sbjct: 3006 EKVKEEITHIKTQA--EDMLVSYENIIQTAMMSSKTGKPG 3043
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 21 SDEEMLFIYGHYKQATVGDINTERP-----GMLDFTGKAKWDAWNELKGTSKED 69
SD E +++ H+ + D + ERP G FT A +D++ E + K D
Sbjct: 698 SDSEWNYLHHHHDASCRQDFSPERPKADSLGCPSFTSMATYDSFLEKSPSDKAD 751
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 21 SDEEMLFIYGHYKQATVGDINTERP-----GMLDFTGKAKWDAWNELKGTSKED 69
SD E +++ H+ + D + ERP G FT A +D++ E + K D
Sbjct: 542 SDSEWNYLHHHHDASCRQDFSPERPKADSLGCPSFTSMATYDSFLEKSPSDKAD 595
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,326,379
Number of Sequences: 37866
Number of extensions: 125209
Number of successful extensions: 265
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 21
length of query: 87
length of database: 18,247,518
effective HSP length: 59
effective length of query: 28
effective length of database: 16,013,424
effective search space: 448375872
effective search space used: 448375872
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.