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Search of human proteins with 12025663
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c
[Homo sapiens]
(103 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c ... 212 4e-56
gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a ... 189 3e-49
gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens] 189 3e-49
gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d ... 189 3e-49
gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a ... 189 3e-49
gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens] 167 1e-42
gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo sa... 45 9e-06
gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo sapi... 45 9e-06
gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens] 41 2e-04
gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo sap... 37 0.003
gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens] 36 0.006
gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo sapi... 35 0.010
gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 35 0.010
gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo sap... 35 0.010
gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo sa... 35 0.010
gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens] 34 0.022
gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo s... 34 0.022
gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo sa... 34 0.022
gi|32967285 ubiquitin-conjugating enzyme E2C isoform 3 [Homo sap... 33 0.063
gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo s... 32 0.082
gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens] 32 0.11
gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo s... 32 0.14
gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo sa... 32 0.14
gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens] 32 0.14
gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo s... 32 0.14
gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo s... 32 0.14
gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 32 0.14
gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 32 0.14
gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 32 0.14
gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo s... 32 0.14
>gi|12025663 ubiquitin-conjugating enzyme E2 variant 1 isoform c
[Homo sapiens]
Length = 103
Score = 212 bits (540), Expect = 4e-56
Identities = 103/103 (100%), Positives = 103/103 (100%)
Query: 1 MKEDLNLENFTAKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 60
MKEDLNLENFTAKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA
Sbjct: 1 MKEDLNLENFTAKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRA 60
Query: 61 ISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
ISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 61 ISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
>gi|40806164 ubiquitin-conjugating enzyme E2 variant 1 isoform a
[Homo sapiens]
Length = 170
Score = 189 bits (481), Expect = 3e-49
Identities = 94/107 (87%), Positives = 97/107 (90%), Gaps = 6/107 (5%)
Query: 3 EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56
ED+ L +T +TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV
Sbjct: 64 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 123
Query: 57 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 124 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
>gi|40806190 TMEM189-UBE2V1 readthrough transcript [Homo sapiens]
Length = 370
Score = 189 bits (481), Expect = 3e-49
Identities = 94/107 (87%), Positives = 97/107 (90%), Gaps = 6/107 (5%)
Query: 3 EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56
ED+ L +T +TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV
Sbjct: 264 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 323
Query: 57 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 324 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 370
>gi|73765546 ubiquitin-conjugating enzyme E2 variant 1 isoform d
[Homo sapiens]
Length = 147
Score = 189 bits (481), Expect = 3e-49
Identities = 94/107 (87%), Positives = 97/107 (90%), Gaps = 6/107 (5%)
Query: 3 EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56
ED+ L +T +TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV
Sbjct: 41 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 100
Query: 57 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 101 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 147
>gi|40806167 ubiquitin-conjugating enzyme E2 variant 1 isoform a
[Homo sapiens]
Length = 170
Score = 189 bits (481), Expect = 3e-49
Identities = 94/107 (87%), Positives = 97/107 (90%), Gaps = 6/107 (5%)
Query: 3 EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56
ED+ L +T +TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV
Sbjct: 64 EDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 123
Query: 57 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN
Sbjct: 124 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 170
>gi|4507797 ubiquitin-conjugating enzyme E2v2 [Homo sapiens]
Length = 145
Score = 167 bits (424), Expect = 1e-42
Identities = 82/107 (76%), Positives = 92/107 (85%), Gaps = 6/107 (5%)
Query: 3 EDLNLENFTA------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVV 56
ED+ L +T +T YENRIYSLK+ECGPKYPEAPP VRFVTKINMNG+N+S+G+V
Sbjct: 39 EDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMV 98
Query: 57 DPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
D R+I VLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ Y+N
Sbjct: 99 DARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN 145
>gi|163660385 ubiquitin-conjugating enzyme E2K isoform 2 [Homo
sapiens]
Length = 157
Score = 45.4 bits (106), Expect = 9e-06
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 1 MKEDLNLENFTA---------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNS 51
+K DL ENFT T YE Y L+I+ YP PP VRF+TKI ++S
Sbjct: 27 IKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISS 86
Query: 52 SNGVVDPRAISVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
G + + +L +W + +++ VL L+ L+ + E P P+ +N
Sbjct: 87 VTGAI---CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132
>gi|4885417 ubiquitin-conjugating enzyme E2K isoform 1 [Homo
sapiens]
Length = 200
Score = 45.4 bits (106), Expect = 9e-06
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 1 MKEDLNLENFTA---------KTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNS 51
+K DL ENFT T YE Y L+I+ YP PP VRF+TKI ++S
Sbjct: 27 IKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISS 86
Query: 52 SNGVVDPRAISVLA-KWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYSN 103
G + + +L +W + +++ VL L+ L+ + E P P+ +N
Sbjct: 87 VTGAI---CLDILKDQWAAAMTLRTVLLSLQALLAAAE----PDDPQDAVVAN 132
>gi|7661808 ubiquitin-conjugating enzyme E2T [Homo sapiens]
Length = 197
Score = 41.2 bits (95), Expect = 2e-04
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12 AKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGV-VDPRAISVLAKWQNS 70
A T YE ++ L++ +YP PP +RF+T I ++S+ + +D + W+ S
Sbjct: 42 ANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPS 101
Query: 71 YSIKVVLQELRRLMMSKEN 89
+I VL + +L+MS+ N
Sbjct: 102 LNIATVLTSI-QLLMSEPN 119
>gi|32967280 ubiquitin-conjugating enzyme E2A isoform 1 [Homo
sapiens]
Length = 152
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 14 TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYS 72
T +E+ + L IE +YP PP VRFV+K+ V + + + +L +W +Y
Sbjct: 46 TPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSI----CLDILQNRWSPTYD 101
Query: 73 IKVVLQELRRLM 84
+ +L ++ L+
Sbjct: 102 VSSILTSIQSLL 113
>gi|4507771 ubiquitin-conjugating enzyme E2B [Homo sapiens]
Length = 152
Score = 36.2 bits (82), Expect = 0.006
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 14 TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYS 72
T +E+ + L IE +YP PP VRF++K+ V + + + +L +W +Y
Sbjct: 46 TPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSI----CLDILQNRWSPTYD 101
Query: 73 IKVVLQELRRLM 84
+ +L ++ L+
Sbjct: 102 VSSILTSIQSLL 113
>gi|5902146 ubiquitin-conjugating enzyme E2C isoform 1 [Homo
sapiens]
Length = 179
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 12 AKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNS 70
A T+YE+ Y L +E YP P V+F+T V++ + + +L KW
Sbjct: 70 AGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNI----CLDILKEKWSAL 125
Query: 71 YSIKVVLQELRRLM 84
Y ++ +L ++ L+
Sbjct: 126 YDVRTILLSIQSLL 139
>gi|32967289 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 12 AKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNS 70
A T+YE+ Y L +E YP P V+F+T V++ + + +L KW
Sbjct: 31 AGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNI----CLDILKEKWSAL 86
Query: 71 YSIKVVLQELRRLM 84
Y ++ +L ++ L+
Sbjct: 87 YDVRTILLSIQSLL 100
>gi|32967287 ubiquitin-conjugating enzyme E2C isoform 4 [Homo
sapiens]
Length = 140
Score = 35.4 bits (80), Expect = 0.010
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 12 AKTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNS 70
A T+YE+ Y L +E YP P V+F+T V++ + + +L KW
Sbjct: 31 AGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNI----CLDILKEKWSAL 86
Query: 71 YSIKVVLQELRRLM 84
Y ++ +L ++ L+
Sbjct: 87 YDVRTILLSIQSLL 100
>gi|4759282 ubiquitin-conjugating enzyme E2L 6 isoform 1 [Homo
sapiens]
Length = 153
Score = 35.4 bits (80), Expect = 0.010
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKV 75
Y + ++L+I P+YP PP ++F TKI V+ + + P I W+
Sbjct: 46 YHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLP--IISSENWKPCTKTCQ 103
Query: 76 VLQELRRLMMSKENMKLP 93
VL+ L +++++ N++ P
Sbjct: 104 VLEAL-NVLVNRPNIREP 120
>gi|22749327 ubiquitin-conjugating enzyme E2E 2 [Homo sapiens]
Length = 201
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 14 TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYS 72
++YE ++ L I P YP PP V F T+I +N S GV+ + +L W + +
Sbjct: 97 SVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDILKDNWSPALT 152
Query: 73 IKVVLQELRRLM 84
I VL + L+
Sbjct: 153 ISKVLLSICSLL 164
>gi|33359691 ubiquitin-conjugating enzyme E2E 1 isoform 2 [Homo
sapiens]
Length = 176
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 14 TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYS 72
++YE ++ L I P+YP PP V F T+I +N S GV+ + +L W + +
Sbjct: 72 SVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDILKDNWSPALT 127
Query: 73 IKVVLQELRRLM 84
I VL + L+
Sbjct: 128 ISKVLLSICSLL 139
>gi|4507779 ubiquitin-conjugating enzyme E2E 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 14 TIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYS 72
++YE ++ L I P+YP PP V F T+I +N S GV+ + +L W + +
Sbjct: 89 SVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN-SQGVI---CLDILKDNWSPALT 144
Query: 73 IKVVLQELRRLM 84
I VL + L+
Sbjct: 145 ISKVLLSICSLL 156
>gi|32967285 ubiquitin-conjugating enzyme E2C isoform 3 [Homo
sapiens]
Length = 150
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 15 IYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSI 73
+YE+ Y L +E YP P V+F+T V++ + + +L KW Y +
Sbjct: 44 VYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNI----CLDILKEKWSALYDV 99
Query: 74 KVVLQELRRLM 84
+ +L ++ L+
Sbjct: 100 RTILLSIQSLL 110
>gi|8393719 ubiquitin-conjugating enzyme E2D 4 (putative) [Homo
sapiens]
Length = 147
Score = 32.3 bits (72), Expect = 0.082
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F TKI +NS+ + + +L ++W + ++
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSI----CLDILRSQWSPALTVS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|4507793 ubiquitin-conjugating enzyme E2N [Homo sapiens]
Length = 152
Score = 32.0 bits (71), Expect = 0.11
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLA-KWQNSYSIK 74
+E + L++ +YP A P VRF+TKI V+ + + +L KW + I+
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRI----CLDILKDKWSPALQIR 102
Query: 75 VVLQELRRLM 84
VL ++ L+
Sbjct: 103 TVLLSIQALL 112
>gi|33188456 ubiquitin-conjugating enzyme E2D 2 isoform 2 [Homo
sapiens]
Length = 118
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 16 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 71
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 72 KVLLSICSLL 81
>gi|4507775 ubiquitin-conjugating enzyme E2D 2 isoform 1 [Homo
sapiens]
Length = 147
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|4507773 ubiquitin-conjugating enzyme E2D 1 [Homo sapiens]
Length = 147
Score = 31.6 bits (70), Expect = 0.14
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L + YP PP + F TKI +NS+ + + +L ++W + ++
Sbjct: 45 YQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSI----CLDILRSQWSPALTVS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|33149324 ubiquitin-conjugating enzyme E2D 3 isoform 3 [Homo
sapiens]
Length = 149
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 47 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 102
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 103 KVLLSICSLL 112
>gi|33149322 ubiquitin-conjugating enzyme E2D 3 isoform 2 [Homo
sapiens]
Length = 148
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|33149320 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|33149318 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|33149316 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
>gi|33149314 ubiquitin-conjugating enzyme E2D 3 isoform 1 [Homo
sapiens]
Length = 147
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 16 YENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-AKWQNSYSIK 74
Y+ ++ L I YP PP V F T+I +NS+ + + +L ++W + +I
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI----CLDILRSQWSPALTIS 100
Query: 75 VVLQELRRLM 84
VL + L+
Sbjct: 101 KVLLSICSLL 110
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,285,938
Number of Sequences: 37866
Number of extensions: 146670
Number of successful extensions: 418
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 376
Number of HSP's gapped (non-prelim): 58
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.