Guide to the Human Genome
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Search of human proteins with 24308113

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|24308113 KIF1 binding protein [Homo sapiens]
         (621 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|24308113 KIF1 binding protein [Homo sapiens]                      1247   0.0  
gi|115648142 centrosomal protein 164kDa [Homo sapiens]                 39   0.019
gi|46852174 kinesin family member 3A [Homo sapiens]                    35   0.27 
gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     33   0.60 
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     33   0.60 
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]     33   0.60 
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]     33   0.60 
gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo...    33   1.0  
gi|34878777 ring finger protein 20 [Homo sapiens]                      33   1.0  
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ...    32   1.7  
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ...    32   1.7  
gi|27262630 nuclear autoantigenic sperm protein isoform 3 [Homo ...    32   1.7  
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         32   1.7  
gi|39930479 DIX domain containing 1 isoform b [Homo sapiens]           32   2.3  
gi|83816971 DIX domain containing 1 isoform a [Homo sapiens]           32   2.3  
gi|146260271 hypothetical protein LOC129881 [Homo sapiens]             32   2.3  
gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]    31   3.0  
gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]     31   3.0  
gi|56550086 WD repeat and HMG-box DNA binding protein 1 isoform ...    31   3.0  
gi|5901892 WD repeat and HMG-box DNA binding protein 1 isoform 1...    31   3.0  
gi|66472382 nischarin [Homo sapiens]                                   31   3.0  
gi|122937209 hypothetical protein LOC728858 [Homo sapiens]             31   3.0  
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     31   3.0  
gi|212276078 leucine rich repeat (in FLII) interacting protein 1...    31   3.9  
gi|19923493 pleckstrin homology domain containing, family A memb...    31   3.9  
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    31   3.9  
gi|93141214 sodium channel, voltage-gated, type II, alpha isofor...    30   5.1  
gi|93141212 sodium channel, voltage-gated, type II, alpha isofor...    30   5.1  
gi|93141210 sodium channel, voltage-gated, type II, alpha isofor...    30   5.1  
gi|33946304 solute carrier family 8 (sodium/calcium exchanger), ...    30   5.1  

>gi|24308113 KIF1 binding protein [Homo sapiens]
          Length = 621

 Score = 1247 bits (3227), Expect = 0.0
 Identities = 621/621 (100%), Positives = 621/621 (100%)

Query: 1   MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDER 60
           MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDER
Sbjct: 1   MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDER 60

Query: 61  PEAEDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVK 120
           PEAEDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVK
Sbjct: 61  PEAEDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVK 120

Query: 121 CLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPP 180
           CLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPP
Sbjct: 121 CLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPP 180

Query: 181 LDPTERFLPEEEKLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHSTLKRQLE 240
           LDPTERFLPEEEKLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHSTLKRQLE
Sbjct: 181 LDPTERFLPEEEKLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHSTLKRQLE 240

Query: 241 HNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGKISATEDTPEAEGEVP 300
           HNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGKISATEDTPEAEGEVP
Sbjct: 241 HNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGKISATEDTPEAEGEVP 300

Query: 301 ELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEESIRK 360
           ELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEESIRK
Sbjct: 301 ELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEESIRK 360

Query: 361 KAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI 420
           KAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI
Sbjct: 361 KAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI 420

Query: 421 EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHA 480
           EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHA
Sbjct: 421 EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHA 480

Query: 481 YYDMMDLKVAIADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVL 540
           YYDMMDLKVAIADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVL
Sbjct: 481 YYDMMDLKVAIADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVL 540

Query: 541 RPAMLAKFRVARLYGKIITADPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELS 600
           RPAMLAKFRVARLYGKIITADPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELS
Sbjct: 541 RPAMLAKFRVARLYGKIITADPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELS 600

Query: 601 KEMVSLLPTKMERFRTKMALT 621
           KEMVSLLPTKMERFRTKMALT
Sbjct: 601 KEMVSLLPTKMERFRTKMALT 621


>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
          Length = 1460

 Score = 38.5 bits (88), Expect = 0.019
 Identities = 107/503 (21%), Positives = 192/503 (38%), Gaps = 61/503 (12%)

Query: 6   WAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKAL-LGPAPED-EDERPEA 63
           W E  E  + + A   ++L    E+ P       +   +  +A  LGP  E+ ED   + 
Sbjct: 504 WKEAEELGEDSAASLSLQLSLQREQAPSPPAACEKGKEQHSQAEELGPGQEEAEDPEEKV 563

Query: 64  EDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLR 123
              P           E V P   +++ A++ A+ E    V   D   L   ++  ++ LR
Sbjct: 564 AVSPTPPVSPEVRSTEPVAPPEQLSEAALK-AMEEAVAQVLEQDQRHLLESKQEKMQQLR 622

Query: 124 LLRRYRLSHDCISLCIQAQNNLGILWSEREE-IETAQAYLESSEALYNQYMK-EVGSPPL 181
                    + + L  Q + +L  L    ++ IE  +A +   E+    +++ +V S   
Sbjct: 623 EKLCQEEEEEILRLHQQKEQSLSSLRERLQKAIEEEEARMREEESQRLSWLRAQVQSSTQ 682

Query: 182 DPTERFLPEEE--------KLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHS 233
              ++   E+E        +L  Q++++R   +   N   L Q+ + +E  EK+     +
Sbjct: 683 ADEDQIRAEQEASLQKLREELESQQKAER-ASLEQKNRQMLEQLKEEIEASEKSEQAALN 741

Query: 234 TLKRQLEHNAYHPIEWAIN--AATLSQFY---INKLCF-MEARHCLSAANVIFGQTGKIS 287
             K +        +E       ATL + +   + +LC  +EA+H      V+     KI 
Sbjct: 742 AAKEKALQQLREQLEGERKEAVATLEKEHSAELERLCSSLEAKH----REVVSSLQKKIQ 797

Query: 288 ATEDTPEAE-----GEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQS 342
             +   EA+     G+V    HQ+   +A    +    L +  Q    ++   LD  K+ 
Sbjct: 798 EAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLLREKRQEVEGEHERRLDKMKEE 857

Query: 343 ELRALRK-KELDEEESIRKKAVQFG--TGELCDAISAVEEKVSYLRPLDFEEARELFLLG 399
             + + K +E  E E  +++A   G  TGEL        E++      + E  R+     
Sbjct: 858 HQQVMAKAREQYEAEERKQRAELLGHLTGEL--------ERLQRAHERELETVRQ----E 905

Query: 400 QHYVFEAKEFFQIDGYVTDHIEVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLE--PL 457
           QH   E               ++ + H    + L   E D+E R K  K R+A+LE    
Sbjct: 906 QHKRLE---------------DLRRRHREQERKLQDLELDLETRAKDVKARLALLEVQEE 950

Query: 458 TVDLNPQYYLLVNRQIQFEIAHA 480
           T     Q  L V RQ+  +   A
Sbjct: 951 TARREKQQLLDVQRQVALKSEEA 973


>gi|46852174 kinesin family member 3A [Homo sapiens]
          Length = 699

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%)

Query: 286 ISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELR 345
           IS +E+  + EGEV E   +RK    +  +     +   A++  +    E  LD + E R
Sbjct: 385 ISGSEEDDDEEGEVGEDGEKRKKRRGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEER 444

Query: 346 ALRKKELDEEESIRKKAVQFGTGELCDAISAVEEKV 381
              + EL++ E    KA Q     L + +SA+E+KV
Sbjct: 445 NKARAELEKREKDLLKAQQ-EHQSLLEKLSALEKKV 479


>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%)

Query: 53  APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102
           APE DEDE       RPE          AL  G P +   PEG    R           G
Sbjct: 10  APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 59

Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162
           ++  + E+  + E HL + L L +      D +      Q+NLG   +E E+ E  +   
Sbjct: 60  LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 110

Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220
             + + L  +   E  SPPL PT + +   E L    E+S   +K  +     ++++ Q 
Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 168

Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280
           LE + +A      T K  L   A   +     A+T S++   ++    A    S  +++ 
Sbjct: 169 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226

Query: 281 GQTGKISATE 290
           G   K S  E
Sbjct: 227 GDMSKKSLWE 236


>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%)

Query: 53  APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102
           APE DEDE       RPE          AL  G P +   PEG    R           G
Sbjct: 10  APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 59

Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162
           ++  + E+  + E HL + L L +      D +      Q+NLG   +E E+ E  +   
Sbjct: 60  LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 110

Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220
             + + L  +   E  SPPL PT + +   E L    E+S   +K  +     ++++ Q 
Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 168

Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280
           LE + +A      T K  L   A   +     A+T S++   ++    A    S  +++ 
Sbjct: 169 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226

Query: 281 GQTGKISATE 290
           G   K S  E
Sbjct: 227 GDMSKKSLWE 236


>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
          Length = 277

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%)

Query: 53  APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102
           APE DEDE       RPE          AL  G P +   PEG    R           G
Sbjct: 10  APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 59

Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162
           ++  + E+  + E HL + L L +      D +      Q+NLG   +E E+ E  +   
Sbjct: 60  LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 110

Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220
             + + L  +   E  SPPL PT + +   E L    E+S   +K  +     ++++ Q 
Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 168

Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280
           LE + +A      T K  L   A   +     A+T S++   ++    A    S  +++ 
Sbjct: 169 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226

Query: 281 GQTGKISATE 290
           G   K S  E
Sbjct: 227 GDMSKKSLWE 236


>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
          Length = 339

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%)

Query: 53  APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102
           APE DEDE       RPE          AL  G P +   PEG    R           G
Sbjct: 72  APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 121

Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162
           ++  + E+  + E HL + L L +      D +      Q+NLG   +E E+ E  +   
Sbjct: 122 LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 172

Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220
             + + L  +   E  SPPL PT + +   E L    E+S   +K  +     ++++ Q 
Sbjct: 173 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 230

Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280
           LE + +A      T K  L   A   +     A+T S++   ++    A    S  +++ 
Sbjct: 231 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 288

Query: 281 GQTGKISATE 290
           G   K S  E
Sbjct: 289 GDMSKKSLWE 298


>gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo
           sapiens]
          Length = 473

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 18/112 (16%)

Query: 304 HQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSEL----RALRKKELDEEESIR 359
           + ++G+I       C  + +  Q S  D    + L K +++    R L+++E++++++ R
Sbjct: 178 YSKRGDIVFVDRAACFAIQKGLQASRSD----IKLFKHNDMADLERLLKEQEIEDQKNPR 233

Query: 360 KKAVQ----------FGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQH 401
           K  V             TG +C     V+ K  Y   +  EE+    +LG+H
Sbjct: 234 KARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEH 285


>gi|34878777 ring finger protein 20 [Homo sapiens]
          Length = 975

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 2/82 (2%)

Query: 306 RKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQS--ELRALRKKELDEEESIRKKAV 363
           +K + ++  +K  L + ++A    +D +  +  +K+S  EL  LR++  D E+  +K+  
Sbjct: 634 KKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLEDKEKKENK 693

Query: 364 QFGTGELCDAISAVEEKVSYLR 385
           +    +    I AVEE++ YL+
Sbjct: 694 KMADEDALRKIRAVEEQIEYLQ 715


>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
           sapiens]
          Length = 788

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 78  AEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISL 137
           A+++       +  +  A     LG   +++E      E    CL L  +Y  +HD   L
Sbjct: 525 AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHD--RL 582

Query: 138 CIQAQNNLGILWSEREEIETAQA-------YLESSEALYNQYMKEV-GS-----PPLDPT 184
             +    LG+ +    + + A A        +E+  A+ N+ +KE  GS       ++  
Sbjct: 583 LAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEEL 642

Query: 185 ERFLPE-EEKLTEQERSKR 202
           +  LPE  EK+ + + S+R
Sbjct: 643 KELLPEIREKIEDAKESQR 661


>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
           sapiens]
          Length = 790

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 78  AEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISL 137
           A+++       +  +  A     LG   +++E      E    CL L  +Y  +HD   L
Sbjct: 527 AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHD--RL 584

Query: 138 CIQAQNNLGILWSEREEIETAQA-------YLESSEALYNQYMKEV-GS-----PPLDPT 184
             +    LG+ +    + + A A        +E+  A+ N+ +KE  GS       ++  
Sbjct: 585 LAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEEL 644

Query: 185 ERFLPE-EEKLTEQERSKR 202
           +  LPE  EK+ + + S+R
Sbjct: 645 KELLPEIREKIEDAKESQR 663


>gi|27262630 nuclear autoantigenic sperm protein isoform 3 [Homo
           sapiens]
          Length = 449

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 78  AEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISL 137
           A+++       +  +  A     LG   +++E      E    CL L  +Y  +HD   L
Sbjct: 186 AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHD--RL 243

Query: 138 CIQAQNNLGILWSEREEIETAQA-------YLESSEALYNQYMKEV-GS-----PPLDPT 184
             +    LG+ +    + + A A        +E+  A+ N+ +KE  GS       ++  
Sbjct: 244 LAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEEL 303

Query: 185 ERFLPE-EEKLTEQERSKR 202
           +  LPE  EK+ + + S+R
Sbjct: 304 KELLPEIREKIEDAKESQR 322


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 5/93 (5%)

Query: 17   LALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDERPEAED----GPGAGDH 72
            L  S  E+ +   K+  +   +AR  L++ K  +   P++E+E P A D    G G G H
Sbjct: 2320 LEASLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDESSCGTGGGTH 2379

Query: 73   ALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNH 105
                 A+  E  G      +R A  E   G NH
Sbjct: 2380 RRSKKAKAPERPGTRVSERLRGARAETQ-GANH 2411


>gi|39930479 DIX domain containing 1 isoform b [Homo sapiens]
          Length = 472

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 45/196 (22%)

Query: 29  EKEPY--KSKYSARALLEEVKALL--GPAPEDEDERPEAEDGPGAGDHALGLPAEVVEPE 84
           E++ Y  K    A+ ++  ++ALL  G  PEDE ERP A   PG            V PE
Sbjct: 75  EQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPG------------VNPE 122

Query: 85  GPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNN 144
                   +L +I+  L  +  + ++L   ++ L+KC +  R  +   D +   +  Q +
Sbjct: 123 -------EQLIIIQSRLDQSMEENQDL---KKELLKCKQEARNLQGIKDALQQRL-TQQD 171

Query: 145 LGILWSEREEIET-------------AQAYLESSEALYNQYMKEVGSPPLDPTERFLPEE 191
             +L  ++E +                Q  L+    L  +Y KE+G       +R L + 
Sbjct: 172 TSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQ-----KDRLLQQH 226

Query: 192 EKLTEQERSKRFEKVY 207
           +   E+   K  +  Y
Sbjct: 227 QAKLEEALRKLSDVSY 242


>gi|83816971 DIX domain containing 1 isoform a [Homo sapiens]
          Length = 683

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 45/196 (22%)

Query: 29  EKEPY--KSKYSARALLEEVKALL--GPAPEDEDERPEAEDGPGAGDHALGLPAEVVEPE 84
           E++ Y  K    A+ ++  ++ALL  G  PEDE ERP A   PG            V PE
Sbjct: 286 EQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPG------------VNPE 333

Query: 85  GPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNN 144
                   +L +I+  L  +  + ++L   ++ L+KC +  R  +   D +   +  Q +
Sbjct: 334 -------EQLIIIQSRLDQSMEENQDL---KKELLKCKQEARNLQGIKDALQQRL-TQQD 382

Query: 145 LGILWSEREEIET-------------AQAYLESSEALYNQYMKEVGSPPLDPTERFLPEE 191
             +L  ++E +                Q  L+    L  +Y KE+G       +R L + 
Sbjct: 383 TSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQ-----KDRLLQQH 437

Query: 192 EKLTEQERSKRFEKVY 207
           +   E+   K  +  Y
Sbjct: 438 QAKLEEALRKLSDVSY 453


>gi|146260271 hypothetical protein LOC129881 [Homo sapiens]
          Length = 552

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 40/232 (17%)

Query: 149 WSEREEIETAQAYLESSEALYNQYMKEVGSPPLDPTERFLPEEEKLTEQERSKRFEKVYT 208
           W E+ ++   +A+ E  E    ++ + V     D  ++    EE   E+ER K++E+   
Sbjct: 185 WEEQLKLNIEKAFKEEQEKAEKRHRERVALAK-DHLKQIKEHEE---EEERRKKYEEKDA 240

Query: 209 HNLYYLAQVYQHLEM---FEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLC 265
             +     +Y+ +EM    EK     H + +R LEH     I  A+      +       
Sbjct: 241 EEIKRQNALYE-IEMRKKLEKKREEMHESRRRFLEHMQDKHIIKAVEQQQQEEEDEKMRK 299

Query: 266 FMEARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNA 325
           F++A+  L        Q GK        E E E   L  +R+  I     +     + N 
Sbjct: 300 FIKAKKRLI-------QMGK--------EKEAETHRLMEKRRERIHNFLSELLKEKLDNE 344

Query: 326 QLSMQDNIGELDLDKQ-----------------SELRALRKKELDEEESIRK 360
            + +  +I E + + +                 +E RA+  K  +EEE  RK
Sbjct: 345 DMIIARDIAEAEAEWEKREREKDEKNKAELKTIAEYRAIVMKNKEEEERQRK 396


>gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]
          Length = 1068

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 86/400 (21%), Positives = 152/400 (38%), Gaps = 74/400 (18%)

Query: 22  VELHKNPEKEPYKSKYSARALLEEVKALLG-PAPEDEDERPE----AEDGPGAG------ 70
           +++ + PE  P  +   A AL E +K ++  P    EDE PE       GP AG      
Sbjct: 277 IQIPRLPEGPP--NFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVA 334

Query: 71  ---DHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTE---------------ELS 112
              D   G P   V+ +  +   +++  V      +  I  E               E  
Sbjct: 335 DLFDQTFGPPNGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGE 394

Query: 113 AGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREE--IETAQAYLESSEALYN 170
             E+   K   L+   +L H+       AQ     L  ER +   E A+    ++EA YN
Sbjct: 395 LEEQRKQKQKALVDNEQLRHEL------AQLRAAQLEGERSQGLREEAERKASATEARYN 448

Query: 171 QYMKEVGSPPLDPTERFLPEE----EKLT-EQERSKRFEKVYTHNLYYLAQVYQHLEMFE 225
           + +KE  S  +      L +     ++LT  Q+  +   +V     + + QV +  E+  
Sbjct: 449 K-LKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVEQVKRESELKL 507

Query: 226 KAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGK 285
           +        LKR+LE  A                         A+  LS          +
Sbjct: 508 EEKSDQLEKLKRELEAKAGE--------------------LARAQEALSHTEQ---SKSE 544

Query: 286 ISATEDTPEAEGE-VPELYHQRKGEI--ARCWIKYCLTLMQNAQLSMQDNIGELD---LD 339
           +S+  DT  AE + +     QR+ ++  A+  ++     +   Q       GEL     +
Sbjct: 545 LSSRLDTLSAEKDALSGAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAE 604

Query: 340 KQSELRALRKKELDEEESIRKKAVQFGTGELCDAISAVEE 379
           ++S+ + LR++ LDE+ ++ + A     G L DA+S +++
Sbjct: 605 RESQEQGLRQRLLDEQFAVLRGAAAEAAGILQDAVSKLDD 644


>gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]
          Length = 1048

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 86/400 (21%), Positives = 152/400 (38%), Gaps = 74/400 (18%)

Query: 22  VELHKNPEKEPYKSKYSARALLEEVKALLG-PAPEDEDERPE----AEDGPGAG------ 70
           +++ + PE  P  +   A AL E +K ++  P    EDE PE       GP AG      
Sbjct: 257 IQIPRLPEGPP--NFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVA 314

Query: 71  ---DHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTE---------------ELS 112
              D   G P   V+ +  +   +++  V      +  I  E               E  
Sbjct: 315 DLFDQTFGPPNGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGE 374

Query: 113 AGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREE--IETAQAYLESSEALYN 170
             E+   K   L+   +L H+       AQ     L  ER +   E A+    ++EA YN
Sbjct: 375 LEEQRKQKQKALVDNEQLRHEL------AQLRAAQLEGERSQGLREEAERKASATEARYN 428

Query: 171 QYMKEVGSPPLDPTERFLPEE----EKLT-EQERSKRFEKVYTHNLYYLAQVYQHLEMFE 225
           + +KE  S  +      L +     ++LT  Q+  +   +V     + + QV +  E+  
Sbjct: 429 K-LKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVEQVKRESELKL 487

Query: 226 KAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGK 285
           +        LKR+LE  A                         A+  LS          +
Sbjct: 488 EEKSDQLEKLKRELEAKAGE--------------------LARAQEALSHTEQ---SKSE 524

Query: 286 ISATEDTPEAEGE-VPELYHQRKGEI--ARCWIKYCLTLMQNAQLSMQDNIGELD---LD 339
           +S+  DT  AE + +     QR+ ++  A+  ++     +   Q       GEL     +
Sbjct: 525 LSSRLDTLSAEKDALSGAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAE 584

Query: 340 KQSELRALRKKELDEEESIRKKAVQFGTGELCDAISAVEE 379
           ++S+ + LR++ LDE+ ++ + A     G L DA+S +++
Sbjct: 585 RESQEQGLRQRLLDEQFAVLRGAAAEAAGILQDAVSKLDD 624


>gi|56550086 WD repeat and HMG-box DNA binding protein 1 isoform 2
           [Homo sapiens]
          Length = 1006

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)

Query: 298 EVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEES 357
           E+ +L  Q    +A   IKY     ++ +L +   + EL ++K +EL A + +E +EEE 
Sbjct: 660 ELADLMTQNAVNLA---IKYA---SRSRKLILAQKLSELAVEKAAELTATQVEEEEEEED 713

Query: 358 IRKK 361
            RKK
Sbjct: 714 FRKK 717


>gi|5901892 WD repeat and HMG-box DNA binding protein 1 isoform 1
           [Homo sapiens]
          Length = 1129

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)

Query: 298 EVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEES 357
           E+ +L  Q    +A   IKY     ++ +L +   + EL ++K +EL A + +E +EEE 
Sbjct: 783 ELADLMTQNAVNLA---IKYA---SRSRKLILAQKLSELAVEKAAELTATQVEEEEEEED 836

Query: 358 IRKK 361
            RKK
Sbjct: 837 FRKK 840


>gi|66472382 nischarin [Homo sapiens]
          Length = 1504

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 27/165 (16%)

Query: 51  GPAPEDEDERPEAEDGPGAGDHALGLPAE---------------VVEPEGPVAQRAVRLA 95
           G   E+E+E  EAE+   A + ALG   +               ++  +G + Q A  L 
Sbjct: 671 GEEEEEEEEDEEAEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGSIRQFAACLV 730

Query: 96  VIEFHLGVNHIDTEELSAGEEHLVKCLRLL----------RRYRLSHDCISLCIQAQNNL 145
           + +F + V  I  +E     +H++  LR +            + +   C+ L ++   N 
Sbjct: 731 LTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLVLKVRHSENT 790

Query: 146 GILWSEREEIETAQAYLESSEALYNQYMKEVGSPPLDPTERFLPE 190
             + S+   +    A L S  A   Q+M  + SP L  +   L E
Sbjct: 791 LFIISDAANLHEFHADLRSCFA--PQHMAMLCSPILYGSHTSLQE 833


>gi|122937209 hypothetical protein LOC728858 [Homo sapiens]
          Length = 269

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 4/36 (11%)

Query: 503 VKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGED 538
           V K+NNL    ++ +Q+FL++L+D + VFPE   +D
Sbjct: 128 VGKLNNL----VQEFQIFLENLKDDDAVFPETAQQD 159


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 28  PEKEPYKSKYSARALLEEVKALLGPAPEDEDERPEAEDGPGAGDHALGLPA-EVVEPEGP 86
           P  EP  +  + R  L+++ AL      D DE   A DG  A   A G  A E V P+GP
Sbjct: 48  PPPEPDDAAAALRLALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGP 107

Query: 87  VAQRAVRLA 95
            A     LA
Sbjct: 108 EAGAPPTLA 116


>gi|212276078 leucine rich repeat (in FLII) interacting protein 1
           isoform 1 [Homo sapiens]
          Length = 640

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 23/327 (7%)

Query: 294 EAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQ--------DNIGELDLDKQSELR 345
           + EG+  +   + K  +A    KY   ++ NAQL  +        D + ++ L+ + +L 
Sbjct: 276 DVEGKYMQGLKEMKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLA 335

Query: 346 ALR-----KKELDEEESIRKKAVQFGTGELCDAISAVEEKVSYLRPLDFEEA---RELFL 397
             R     K +  E E      +QF   E+ +A+   EE +  +R L  ++A   RE+  
Sbjct: 336 ESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQREEMLEEIRQLQQKQASSIREISD 395

Query: 398 LGQHYVFEAKEFFQIDGYVTDHIEVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPL 457
           L +   ++ K+   ++        V  +   L + +   + ++++   +    IA     
Sbjct: 396 LQETIEWKDKKIGALERQKEFFDSVRSERDDLREEVVMLKEELKKHGIILNSEIATNGET 455

Query: 458 TVDLNPQYYLLVNRQIQFEIAHAYYDMMDLKVAI-ADRLRDPDSHIVKKINNLNKSALKY 516
           +  LN   Y    +  + E+ +A     D  + I   +L D    ++++I  L K  L+ 
Sbjct: 456 SDTLNNVGYQGPTKMTKEEL-NALKSTGDGTLDIRLKKLVDERECLLEQIKKL-KGQLEE 513

Query: 517 YQLF--LDSLRDPNKVFPEHIGEDVLRPAMLAKFRVARLYGKIITADPKKELENLATSLE 574
            Q    LD+LR  + V        V+     A  +++ L  K+  A  ++E+  L  ++ 
Sbjct: 514 RQKIGKLDNLRSEDDVLENGTDMHVMDLQRDANRQISDLKFKL--AKSEQEITALEQNVI 571

Query: 575 HYKFIVDYCEKHPEAAQEIEVELELSK 601
             +  V   +   E A++IE EL+  K
Sbjct: 572 RLESQVSRYKSAAENAEKIEDELKAEK 598


>gi|19923493 pleckstrin homology domain containing, family A member
           5 isoform 1 [Homo sapiens]
          Length = 1116

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 309 EIARCW-----IKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKEL----DEEESIR 359
           E+ R W     ++Y +T+ +N      D++GE+  +     RA  +KEL    D  E + 
Sbjct: 714 ELERAWREYDKLEYDVTVTRNQMQEQLDHLGEVQTESAGIQRAQIQKELWRIQDVMEGLS 773

Query: 360 KKAVQFGTGEL 370
           K   Q GT E+
Sbjct: 774 KHKQQRGTTEI 784


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo
           sapiens]
          Length = 2161

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 48/206 (23%), Positives = 75/206 (36%), Gaps = 37/206 (17%)

Query: 44  EEVKALLGPAPEDEDERPEAEDGPGAGDHAL-----GLPAEVVEPEGPVAQRAVRLAVIE 98
           +E +      PE   E   + DGPG G         G P  +    G   +         
Sbjct: 10  DEERHSASECPEGGSESDSSPDGPGRGPRGTRGQGSGAPGSLASVRGLQGRSMSVPDDAH 69

Query: 99  FHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETA 158
           F + V  I   +L     H  KCLR                   N    +W+ ++++  A
Sbjct: 70  FSMMVFRIGIPDL-----HQTKCLRF------------------NPDATIWTAKQQVLCA 106

Query: 159 QAYLESSEALYNQYMKEVGSPPLDPTERFLPEEEKLTEQERSKRFEKVYTH-NLYYLAQV 217
            +  ES + + N  + +  +   D    FL EE  L E  +S  FEK   +    Y  +V
Sbjct: 107 LS--ESLQDVLNYGLFQPATSGRD--ANFLEEERLLREYPQS--FEKGVPYLEFRYKTRV 160

Query: 218 YQHLEMFEKAAHYCHST--LKRQLEH 241
           Y+   + EK     H+   LK+ LE+
Sbjct: 161 YKQTNLDEKQLAKLHTKTGLKKFLEY 186


>gi|93141214 sodium channel, voltage-gated, type II, alpha isoform 2
            [Homo sapiens]
          Length = 2005

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 268  EARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQL 327
            E++  L+A +   G T  I A      AEGE PE+  +   E   C+ + C+   +  Q+
Sbjct: 1130 ESKEKLNATSSSEGSTVDIGAP-----AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQI 1184

Query: 328  SMQDNIGEL 336
            S+++  G+L
Sbjct: 1185 SIEEGKGKL 1193


>gi|93141212 sodium channel, voltage-gated, type II, alpha isoform 1
            [Homo sapiens]
          Length = 2005

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 268  EARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQL 327
            E++  L+A +   G T  I A      AEGE PE+  +   E   C+ + C+   +  Q+
Sbjct: 1130 ESKEKLNATSSSEGSTVDIGAP-----AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQI 1184

Query: 328  SMQDNIGEL 336
            S+++  G+L
Sbjct: 1185 SIEEGKGKL 1193


>gi|93141210 sodium channel, voltage-gated, type II, alpha isoform 1
            [Homo sapiens]
          Length = 2005

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 268  EARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQL 327
            E++  L+A +   G T  I A      AEGE PE+  +   E   C+ + C+   +  Q+
Sbjct: 1130 ESKEKLNATSSSEGSTVDIGAP-----AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQI 1184

Query: 328  SMQDNIGEL 336
            S+++  G+L
Sbjct: 1185 SIEEGKGKL 1193


>gi|33946304 solute carrier family 8 (sodium/calcium exchanger),
           member 3 isoform D precursor [Homo sapiens]
          Length = 921

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%)

Query: 330 QDNIGELDLDKQSELRALRKKELDEEESIRKKAVQFGTGELCDAISAVEEKVSYLRPLDF 389
           +D  GEL+      ++ +R K +DEEE  R++      GE       + +       ++ 
Sbjct: 581 EDTYGELEFKNDETVKTIRVKIVDEEEYERQENFFIALGEPKWMERGISDVTDRKLTMEE 640

Query: 390 EEARELFLLGQHYVFEAKEFFQIDGYVTDHIEVVQDHSALFKVLA---FFETDMERRCKM 446
           EEA+ +  +G+  + E  +           +EV+ + S  FK        +T++      
Sbjct: 641 EEAKRIAEMGKPVLGEHPK-----------LEVIIEESYEFKTTVDKLIKKTNLALVVGT 689

Query: 447 HKRRIAMLEPLTV 459
           H  R   +E +TV
Sbjct: 690 HSWRDQFMEAITV 702


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,263,286
Number of Sequences: 37866
Number of extensions: 1067069
Number of successful extensions: 4321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 4259
Number of HSP's gapped (non-prelim): 109
length of query: 621
length of database: 18,247,518
effective HSP length: 108
effective length of query: 513
effective length of database: 14,157,990
effective search space: 7263048870
effective search space used: 7263048870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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