BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|24308113 KIF1 binding protein [Homo sapiens] (621 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|24308113 KIF1 binding protein [Homo sapiens] 1247 0.0 gi|115648142 centrosomal protein 164kDa [Homo sapiens] 39 0.019 gi|46852174 kinesin family member 3A [Homo sapiens] 35 0.27 gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 33 0.60 gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 33 0.60 gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 33 0.60 gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens] 33 0.60 gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo... 33 1.0 gi|34878777 ring finger protein 20 [Homo sapiens] 33 1.0 gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ... 32 1.7 gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ... 32 1.7 gi|27262630 nuclear autoantigenic sperm protein isoform 3 [Homo ... 32 1.7 gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 32 1.7 gi|39930479 DIX domain containing 1 isoform b [Homo sapiens] 32 2.3 gi|83816971 DIX domain containing 1 isoform a [Homo sapiens] 32 2.3 gi|146260271 hypothetical protein LOC129881 [Homo sapiens] 32 2.3 gi|48762942 huntingtin interacting protein-1-related [Homo sapiens] 31 3.0 gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens] 31 3.0 gi|56550086 WD repeat and HMG-box DNA binding protein 1 isoform ... 31 3.0 gi|5901892 WD repeat and HMG-box DNA binding protein 1 isoform 1... 31 3.0 gi|66472382 nischarin [Homo sapiens] 31 3.0 gi|122937209 hypothetical protein LOC728858 [Homo sapiens] 31 3.0 gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 31 3.0 gi|212276078 leucine rich repeat (in FLII) interacting protein 1... 31 3.9 gi|19923493 pleckstrin homology domain containing, family A memb... 31 3.9 gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 31 3.9 gi|93141214 sodium channel, voltage-gated, type II, alpha isofor... 30 5.1 gi|93141212 sodium channel, voltage-gated, type II, alpha isofor... 30 5.1 gi|93141210 sodium channel, voltage-gated, type II, alpha isofor... 30 5.1 gi|33946304 solute carrier family 8 (sodium/calcium exchanger), ... 30 5.1 >gi|24308113 KIF1 binding protein [Homo sapiens] Length = 621 Score = 1247 bits (3227), Expect = 0.0 Identities = 621/621 (100%), Positives = 621/621 (100%) Query: 1 MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDER 60 MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDER Sbjct: 1 MANVPWAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDER 60 Query: 61 PEAEDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVK 120 PEAEDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVK Sbjct: 61 PEAEDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVK 120 Query: 121 CLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPP 180 CLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPP Sbjct: 121 CLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYLESSEALYNQYMKEVGSPP 180 Query: 181 LDPTERFLPEEEKLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHSTLKRQLE 240 LDPTERFLPEEEKLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHSTLKRQLE Sbjct: 181 LDPTERFLPEEEKLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHSTLKRQLE 240 Query: 241 HNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGKISATEDTPEAEGEVP 300 HNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGKISATEDTPEAEGEVP Sbjct: 241 HNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGKISATEDTPEAEGEVP 300 Query: 301 ELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEESIRK 360 ELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEESIRK Sbjct: 301 ELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEESIRK 360 Query: 361 KAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI 420 KAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI Sbjct: 361 KAVQFGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQHYVFEAKEFFQIDGYVTDHI 420 Query: 421 EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHA 480 EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHA Sbjct: 421 EVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPLTVDLNPQYYLLVNRQIQFEIAHA 480 Query: 481 YYDMMDLKVAIADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVL 540 YYDMMDLKVAIADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVL Sbjct: 481 YYDMMDLKVAIADRLRDPDSHIVKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGEDVL 540 Query: 541 RPAMLAKFRVARLYGKIITADPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELS 600 RPAMLAKFRVARLYGKIITADPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELS Sbjct: 541 RPAMLAKFRVARLYGKIITADPKKELENLATSLEHYKFIVDYCEKHPEAAQEIEVELELS 600 Query: 601 KEMVSLLPTKMERFRTKMALT 621 KEMVSLLPTKMERFRTKMALT Sbjct: 601 KEMVSLLPTKMERFRTKMALT 621 >gi|115648142 centrosomal protein 164kDa [Homo sapiens] Length = 1460 Score = 38.5 bits (88), Expect = 0.019 Identities = 107/503 (21%), Positives = 192/503 (38%), Gaps = 61/503 (12%) Query: 6 WAEVCEKFQAALALSRVELHKNPEKEPYKSKYSARALLEEVKAL-LGPAPED-EDERPEA 63 W E E + + A ++L E+ P + + +A LGP E+ ED + Sbjct: 504 WKEAEELGEDSAASLSLQLSLQREQAPSPPAACEKGKEQHSQAEELGPGQEEAEDPEEKV 563 Query: 64 EDGPGAGDHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLR 123 P E V P +++ A++ A+ E V D L ++ ++ LR Sbjct: 564 AVSPTPPVSPEVRSTEPVAPPEQLSEAALK-AMEEAVAQVLEQDQRHLLESKQEKMQQLR 622 Query: 124 LLRRYRLSHDCISLCIQAQNNLGILWSEREE-IETAQAYLESSEALYNQYMK-EVGSPPL 181 + + L Q + +L L ++ IE +A + E+ +++ +V S Sbjct: 623 EKLCQEEEEEILRLHQQKEQSLSSLRERLQKAIEEEEARMREEESQRLSWLRAQVQSSTQ 682 Query: 182 DPTERFLPEEE--------KLTEQERSKRFEKVYTHNLYYLAQVYQHLEMFEKAAHYCHS 233 ++ E+E +L Q++++R + N L Q+ + +E EK+ + Sbjct: 683 ADEDQIRAEQEASLQKLREELESQQKAER-ASLEQKNRQMLEQLKEEIEASEKSEQAALN 741 Query: 234 TLKRQLEHNAYHPIEWAIN--AATLSQFY---INKLCF-MEARHCLSAANVIFGQTGKIS 287 K + +E ATL + + + +LC +EA+H V+ KI Sbjct: 742 AAKEKALQQLREQLEGERKEAVATLEKEHSAELERLCSSLEAKH----REVVSSLQKKIQ 797 Query: 288 ATEDTPEAE-----GEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQS 342 + EA+ G+V HQ+ +A + L + Q ++ LD K+ Sbjct: 798 EAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLLREKRQEVEGEHERRLDKMKEE 857 Query: 343 ELRALRK-KELDEEESIRKKAVQFG--TGELCDAISAVEEKVSYLRPLDFEEARELFLLG 399 + + K +E E E +++A G TGEL E++ + E R+ Sbjct: 858 HQQVMAKAREQYEAEERKQRAELLGHLTGEL--------ERLQRAHERELETVRQ----E 905 Query: 400 QHYVFEAKEFFQIDGYVTDHIEVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLE--PL 457 QH E ++ + H + L E D+E R K K R+A+LE Sbjct: 906 QHKRLE---------------DLRRRHREQERKLQDLELDLETRAKDVKARLALLEVQEE 950 Query: 458 TVDLNPQYYLLVNRQIQFEIAHA 480 T Q L V RQ+ + A Sbjct: 951 TARREKQQLLDVQRQVALKSEEA 973 >gi|46852174 kinesin family member 3A [Homo sapiens] Length = 699 Score = 34.7 bits (78), Expect = 0.27 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 286 ISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELR 345 IS +E+ + EGEV E +RK + + + A++ + E LD + E R Sbjct: 385 ISGSEEDDDEEGEVGEDGEKRKKRRGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEER 444 Query: 346 ALRKKELDEEESIRKKAVQFGTGELCDAISAVEEKV 381 + EL++ E KA Q L + +SA+E+KV Sbjct: 445 NKARAELEKREKDLLKAQQ-EHQSLLEKLSALEKKV 479 >gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] Length = 277 Score = 33.5 bits (75), Expect = 0.60 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%) Query: 53 APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102 APE DEDE RPE AL G P + PEG R G Sbjct: 10 APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 59 Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162 ++ + E+ + E HL + L L + D + Q+NLG +E E+ E + Sbjct: 60 LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 110 Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220 + + L + E SPPL PT + + E L E+S +K + ++++ Q Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 168 Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280 LE + +A T K L A + A+T S++ ++ A S +++ Sbjct: 169 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226 Query: 281 GQTGKISATE 290 G K S E Sbjct: 227 GDMSKKSLWE 236 >gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] Length = 277 Score = 33.5 bits (75), Expect = 0.60 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%) Query: 53 APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102 APE DEDE RPE AL G P + PEG R G Sbjct: 10 APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 59 Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162 ++ + E+ + E HL + L L + D + Q+NLG +E E+ E + Sbjct: 60 LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 110 Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220 + + L + E SPPL PT + + E L E+S +K + ++++ Q Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 168 Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280 LE + +A T K L A + A+T S++ ++ A S +++ Sbjct: 169 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226 Query: 281 GQTGKISATE 290 G K S E Sbjct: 227 GDMSKKSLWE 236 >gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] Length = 277 Score = 33.5 bits (75), Expect = 0.60 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%) Query: 53 APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102 APE DEDE RPE AL G P + PEG R G Sbjct: 10 APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 59 Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162 ++ + E+ + E HL + L L + D + Q+NLG +E E+ E + Sbjct: 60 LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 110 Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220 + + L + E SPPL PT + + E L E+S +K + ++++ Q Sbjct: 111 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 168 Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280 LE + +A T K L A + A+T S++ ++ A S +++ Sbjct: 169 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226 Query: 281 GQTGKISATE 290 G K S E Sbjct: 227 GDMSKKSLWE 236 >gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens] Length = 339 Score = 33.5 bits (75), Expect = 0.60 Identities = 63/250 (25%), Positives = 99/250 (39%), Gaps = 35/250 (14%) Query: 53 APE-DEDE-------RPEAEDGPGAGDHAL--GLPAEVVEPEGPVAQRAVRLAVIEFHLG 102 APE DEDE RPE AL G P + PEG R G Sbjct: 72 APELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRP----------G 121 Query: 103 VNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETAQAYL 162 ++ + E+ + E HL + L L + D + Q+NLG +E E+ E + Sbjct: 122 LHAYEKED--SDEVHLEE-LSLSKEGPGPEDTV------QDNLGAAGAEEEQEEHQKCQQ 172 Query: 163 ESSEA-LYNQYMKEVGSPPLDPTERFLPEEEKLTEQ-ERSKRFEKVYTHNLYYLAQVYQH 220 + + L + E SPPL PT + + E L E+S +K + ++++ Q Sbjct: 173 PRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKK--SQPDLPISKIDQW 230 Query: 221 LEMFEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIF 280 LE + +A T K L A + A+T S++ ++ A S +++ Sbjct: 231 LEQYTQAIETAGRTPK--LARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVA 288 Query: 281 GQTGKISATE 290 G K S E Sbjct: 289 GDMSKKSLWE 298 >gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo sapiens] Length = 473 Score = 32.7 bits (73), Expect = 1.0 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 18/112 (16%) Query: 304 HQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSEL----RALRKKELDEEESIR 359 + ++G+I C + + Q S D + L K +++ R L+++E++++++ R Sbjct: 178 YSKRGDIVFVDRAACFAIQKGLQASRSD----IKLFKHNDMADLERLLKEQEIEDQKNPR 233 Query: 360 KKAVQ----------FGTGELCDAISAVEEKVSYLRPLDFEEARELFLLGQH 401 K V TG +C V+ K Y + EE+ +LG+H Sbjct: 234 KARVTRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEH 285 >gi|34878777 ring finger protein 20 [Homo sapiens] Length = 975 Score = 32.7 bits (73), Expect = 1.0 Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 2/82 (2%) Query: 306 RKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQS--ELRALRKKELDEEESIRKKAV 363 +K + ++ +K L + ++A +D + + +K+S EL LR++ D E+ +K+ Sbjct: 634 KKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKSKAELEDLRQRLKDLEDKEKKENK 693 Query: 364 QFGTGELCDAISAVEEKVSYLR 385 + + I AVEE++ YL+ Sbjct: 694 KMADEDALRKIRAVEEQIEYLQ 715 >gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo sapiens] Length = 788 Score = 32.0 bits (71), Expect = 1.7 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%) Query: 78 AEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISL 137 A+++ + + A LG +++E E CL L +Y +HD L Sbjct: 525 AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHD--RL 582 Query: 138 CIQAQNNLGILWSEREEIETAQA-------YLESSEALYNQYMKEV-GS-----PPLDPT 184 + LG+ + + + A A +E+ A+ N+ +KE GS ++ Sbjct: 583 LAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEEL 642 Query: 185 ERFLPE-EEKLTEQERSKR 202 + LPE EK+ + + S+R Sbjct: 643 KELLPEIREKIEDAKESQR 661 >gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo sapiens] Length = 790 Score = 32.0 bits (71), Expect = 1.7 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%) Query: 78 AEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISL 137 A+++ + + A LG +++E E CL L +Y +HD L Sbjct: 527 AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHD--RL 584 Query: 138 CIQAQNNLGILWSEREEIETAQA-------YLESSEALYNQYMKEV-GS-----PPLDPT 184 + LG+ + + + A A +E+ A+ N+ +KE GS ++ Sbjct: 585 LAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEEL 644 Query: 185 ERFLPE-EEKLTEQERSKR 202 + LPE EK+ + + S+R Sbjct: 645 KELLPEIREKIEDAKESQR 663 >gi|27262630 nuclear autoantigenic sperm protein isoform 3 [Homo sapiens] Length = 449 Score = 32.0 bits (71), Expect = 1.7 Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 16/139 (11%) Query: 78 AEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISL 137 A+++ + + A LG +++E E CL L +Y +HD L Sbjct: 186 AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHD--RL 243 Query: 138 CIQAQNNLGILWSEREEIETAQA-------YLESSEALYNQYMKEV-GS-----PPLDPT 184 + LG+ + + + A A +E+ A+ N+ +KE GS ++ Sbjct: 244 LAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEEL 303 Query: 185 ERFLPE-EEKLTEQERSKR 202 + LPE EK+ + + S+R Sbjct: 304 KELLPEIREKIEDAKESQR 322 >gi|146219843 Snf2-related CBP activator protein [Homo sapiens] Length = 3230 Score = 32.0 bits (71), Expect = 1.7 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 5/93 (5%) Query: 17 LALSRVELHKNPEKEPYKSKYSARALLEEVKALLGPAPEDEDERPEAED----GPGAGDH 72 L S E+ + K+ + +AR L++ K + P++E+E P A D G G G H Sbjct: 2320 LEASLEEVSREELKQAEEQVEAARKDLDQAKEEVFRLPQEEEEGPGAGDESSCGTGGGTH 2379 Query: 73 ALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNH 105 A+ E G +R A E G NH Sbjct: 2380 RRSKKAKAPERPGTRVSERLRGARAETQ-GANH 2411 >gi|39930479 DIX domain containing 1 isoform b [Homo sapiens] Length = 472 Score = 31.6 bits (70), Expect = 2.3 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 45/196 (22%) Query: 29 EKEPY--KSKYSARALLEEVKALL--GPAPEDEDERPEAEDGPGAGDHALGLPAEVVEPE 84 E++ Y K A+ ++ ++ALL G PEDE ERP A PG V PE Sbjct: 75 EQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPG------------VNPE 122 Query: 85 GPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNN 144 +L +I+ L + + ++L ++ L+KC + R + D + + Q + Sbjct: 123 -------EQLIIIQSRLDQSMEENQDL---KKELLKCKQEARNLQGIKDALQQRL-TQQD 171 Query: 145 LGILWSEREEIET-------------AQAYLESSEALYNQYMKEVGSPPLDPTERFLPEE 191 +L ++E + Q L+ L +Y KE+G +R L + Sbjct: 172 TSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQ-----KDRLLQQH 226 Query: 192 EKLTEQERSKRFEKVY 207 + E+ K + Y Sbjct: 227 QAKLEEALRKLSDVSY 242 >gi|83816971 DIX domain containing 1 isoform a [Homo sapiens] Length = 683 Score = 31.6 bits (70), Expect = 2.3 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 45/196 (22%) Query: 29 EKEPY--KSKYSARALLEEVKALL--GPAPEDEDERPEAEDGPGAGDHALGLPAEVVEPE 84 E++ Y K A+ ++ ++ALL G PEDE ERP A PG V PE Sbjct: 286 EQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPG------------VNPE 333 Query: 85 GPVAQRAVRLAVIEFHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNN 144 +L +I+ L + + ++L ++ L+KC + R + D + + Q + Sbjct: 334 -------EQLIIIQSRLDQSMEENQDL---KKELLKCKQEARNLQGIKDALQQRL-TQQD 382 Query: 145 LGILWSEREEIET-------------AQAYLESSEALYNQYMKEVGSPPLDPTERFLPEE 191 +L ++E + Q L+ L +Y KE+G +R L + Sbjct: 383 TSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQ-----KDRLLQQH 437 Query: 192 EKLTEQERSKRFEKVY 207 + E+ K + Y Sbjct: 438 QAKLEEALRKLSDVSY 453 >gi|146260271 hypothetical protein LOC129881 [Homo sapiens] Length = 552 Score = 31.6 bits (70), Expect = 2.3 Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 40/232 (17%) Query: 149 WSEREEIETAQAYLESSEALYNQYMKEVGSPPLDPTERFLPEEEKLTEQERSKRFEKVYT 208 W E+ ++ +A+ E E ++ + V D ++ EE E+ER K++E+ Sbjct: 185 WEEQLKLNIEKAFKEEQEKAEKRHRERVALAK-DHLKQIKEHEE---EEERRKKYEEKDA 240 Query: 209 HNLYYLAQVYQHLEM---FEKAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLC 265 + +Y+ +EM EK H + +R LEH I A+ + Sbjct: 241 EEIKRQNALYE-IEMRKKLEKKREEMHESRRRFLEHMQDKHIIKAVEQQQQEEEDEKMRK 299 Query: 266 FMEARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNA 325 F++A+ L Q GK E E E L +R+ I + + N Sbjct: 300 FIKAKKRLI-------QMGK--------EKEAETHRLMEKRRERIHNFLSELLKEKLDNE 344 Query: 326 QLSMQDNIGELDLDKQ-----------------SELRALRKKELDEEESIRK 360 + + +I E + + + +E RA+ K +EEE RK Sbjct: 345 DMIIARDIAEAEAEWEKREREKDEKNKAELKTIAEYRAIVMKNKEEEERQRK 396 >gi|48762942 huntingtin interacting protein-1-related [Homo sapiens] Length = 1068 Score = 31.2 bits (69), Expect = 3.0 Identities = 86/400 (21%), Positives = 152/400 (38%), Gaps = 74/400 (18%) Query: 22 VELHKNPEKEPYKSKYSARALLEEVKALLG-PAPEDEDERPE----AEDGPGAG------ 70 +++ + PE P + A AL E +K ++ P EDE PE GP AG Sbjct: 277 IQIPRLPEGPP--NFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVA 334 Query: 71 ---DHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTE---------------ELS 112 D G P V+ + + +++ V + I E E Sbjct: 335 DLFDQTFGPPNGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGE 394 Query: 113 AGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREE--IETAQAYLESSEALYN 170 E+ K L+ +L H+ AQ L ER + E A+ ++EA YN Sbjct: 395 LEEQRKQKQKALVDNEQLRHEL------AQLRAAQLEGERSQGLREEAERKASATEARYN 448 Query: 171 QYMKEVGSPPLDPTERFLPEE----EKLT-EQERSKRFEKVYTHNLYYLAQVYQHLEMFE 225 + +KE S + L + ++LT Q+ + +V + + QV + E+ Sbjct: 449 K-LKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVEQVKRESELKL 507 Query: 226 KAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGK 285 + LKR+LE A A+ LS + Sbjct: 508 EEKSDQLEKLKRELEAKAGE--------------------LARAQEALSHTEQ---SKSE 544 Query: 286 ISATEDTPEAEGE-VPELYHQRKGEI--ARCWIKYCLTLMQNAQLSMQDNIGELD---LD 339 +S+ DT AE + + QR+ ++ A+ ++ + Q GEL + Sbjct: 545 LSSRLDTLSAEKDALSGAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAE 604 Query: 340 KQSELRALRKKELDEEESIRKKAVQFGTGELCDAISAVEE 379 ++S+ + LR++ LDE+ ++ + A G L DA+S +++ Sbjct: 605 RESQEQGLRQRLLDEQFAVLRGAAAEAAGILQDAVSKLDD 644 >gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens] Length = 1048 Score = 31.2 bits (69), Expect = 3.0 Identities = 86/400 (21%), Positives = 152/400 (38%), Gaps = 74/400 (18%) Query: 22 VELHKNPEKEPYKSKYSARALLEEVKALLG-PAPEDEDERPE----AEDGPGAG------ 70 +++ + PE P + A AL E +K ++ P EDE PE GP AG Sbjct: 257 IQIPRLPEGPP--NFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVA 314 Query: 71 ---DHALGLPAEVVEPEGPVAQRAVRLAVIEFHLGVNHIDTE---------------ELS 112 D G P V+ + + +++ V + I E E Sbjct: 315 DLFDQTFGPPNGSVKDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGE 374 Query: 113 AGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREE--IETAQAYLESSEALYN 170 E+ K L+ +L H+ AQ L ER + E A+ ++EA YN Sbjct: 375 LEEQRKQKQKALVDNEQLRHEL------AQLRAAQLEGERSQGLREEAERKASATEARYN 428 Query: 171 QYMKEVGSPPLDPTERFLPEE----EKLT-EQERSKRFEKVYTHNLYYLAQVYQHLEMFE 225 + +KE S + L + ++LT Q+ + +V + + QV + E+ Sbjct: 429 K-LKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKEQLAFQVEQVKRESELKL 487 Query: 226 KAAHYCHSTLKRQLEHNAYHPIEWAINAATLSQFYINKLCFMEARHCLSAANVIFGQTGK 285 + LKR+LE A A+ LS + Sbjct: 488 EEKSDQLEKLKRELEAKAGE--------------------LARAQEALSHTEQ---SKSE 524 Query: 286 ISATEDTPEAEGE-VPELYHQRKGEI--ARCWIKYCLTLMQNAQLSMQDNIGELD---LD 339 +S+ DT AE + + QR+ ++ A+ ++ + Q GEL + Sbjct: 525 LSSRLDTLSAEKDALSGAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAE 584 Query: 340 KQSELRALRKKELDEEESIRKKAVQFGTGELCDAISAVEE 379 ++S+ + LR++ LDE+ ++ + A G L DA+S +++ Sbjct: 585 RESQEQGLRQRLLDEQFAVLRGAAAEAAGILQDAVSKLDD 624 >gi|56550086 WD repeat and HMG-box DNA binding protein 1 isoform 2 [Homo sapiens] Length = 1006 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Query: 298 EVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEES 357 E+ +L Q +A IKY ++ +L + + EL ++K +EL A + +E +EEE Sbjct: 660 ELADLMTQNAVNLA---IKYA---SRSRKLILAQKLSELAVEKAAELTATQVEEEEEEED 713 Query: 358 IRKK 361 RKK Sbjct: 714 FRKK 717 >gi|5901892 WD repeat and HMG-box DNA binding protein 1 isoform 1 [Homo sapiens] Length = 1129 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%) Query: 298 EVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKELDEEES 357 E+ +L Q +A IKY ++ +L + + EL ++K +EL A + +E +EEE Sbjct: 783 ELADLMTQNAVNLA---IKYA---SRSRKLILAQKLSELAVEKAAELTATQVEEEEEEED 836 Query: 358 IRKK 361 RKK Sbjct: 837 FRKK 840 >gi|66472382 nischarin [Homo sapiens] Length = 1504 Score = 31.2 bits (69), Expect = 3.0 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 27/165 (16%) Query: 51 GPAPEDEDERPEAEDGPGAGDHALGLPAE---------------VVEPEGPVAQRAVRLA 95 G E+E+E EAE+ A + ALG + ++ +G + Q A L Sbjct: 671 GEEEEEEEEDEEAEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGSIRQFAACLV 730 Query: 96 VIEFHLGVNHIDTEELSAGEEHLVKCLRLL----------RRYRLSHDCISLCIQAQNNL 145 + +F + V I +E +H++ LR + + + C+ L ++ N Sbjct: 731 LTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLVLKVRHSENT 790 Query: 146 GILWSEREEIETAQAYLESSEALYNQYMKEVGSPPLDPTERFLPE 190 + S+ + A L S A Q+M + SP L + L E Sbjct: 791 LFIISDAANLHEFHADLRSCFA--PQHMAMLCSPILYGSHTSLQE 833 >gi|122937209 hypothetical protein LOC728858 [Homo sapiens] Length = 269 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 4/36 (11%) Query: 503 VKKINNLNKSALKYYQLFLDSLRDPNKVFPEHIGED 538 V K+NNL ++ +Q+FL++L+D + VFPE +D Sbjct: 128 VGKLNNL----VQEFQIFLENLKDDDAVFPETAQQD 159 >gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] Length = 651 Score = 31.2 bits (69), Expect = 3.0 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 28 PEKEPYKSKYSARALLEEVKALLGPAPEDEDERPEAEDGPGAGDHALGLPA-EVVEPEGP 86 P EP + + R L+++ AL D DE A DG A A G A E V P+GP Sbjct: 48 PPPEPDDAAAALRLALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGP 107 Query: 87 VAQRAVRLA 95 A LA Sbjct: 108 EAGAPPTLA 116 >gi|212276078 leucine rich repeat (in FLII) interacting protein 1 isoform 1 [Homo sapiens] Length = 640 Score = 30.8 bits (68), Expect = 3.9 Identities = 68/327 (20%), Positives = 136/327 (41%), Gaps = 23/327 (7%) Query: 294 EAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQLSMQ--------DNIGELDLDKQSELR 345 + EG+ + + K +A KY ++ NAQL + D + ++ L+ + +L Sbjct: 276 DVEGKYMQGLKEMKDSLAEVEEKYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLA 335 Query: 346 ALR-----KKELDEEESIRKKAVQFGTGELCDAISAVEEKVSYLRPLDFEEA---RELFL 397 R K + E E +QF E+ +A+ EE + +R L ++A RE+ Sbjct: 336 ESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQREEMLEEIRQLQQKQASSIREISD 395 Query: 398 LGQHYVFEAKEFFQIDGYVTDHIEVVQDHSALFKVLAFFETDMERRCKMHKRRIAMLEPL 457 L + ++ K+ ++ V + L + + + ++++ + IA Sbjct: 396 LQETIEWKDKKIGALERQKEFFDSVRSERDDLREEVVMLKEELKKHGIILNSEIATNGET 455 Query: 458 TVDLNPQYYLLVNRQIQFEIAHAYYDMMDLKVAI-ADRLRDPDSHIVKKINNLNKSALKY 516 + LN Y + + E+ +A D + I +L D ++++I L K L+ Sbjct: 456 SDTLNNVGYQGPTKMTKEEL-NALKSTGDGTLDIRLKKLVDERECLLEQIKKL-KGQLEE 513 Query: 517 YQLF--LDSLRDPNKVFPEHIGEDVLRPAMLAKFRVARLYGKIITADPKKELENLATSLE 574 Q LD+LR + V V+ A +++ L K+ A ++E+ L ++ Sbjct: 514 RQKIGKLDNLRSEDDVLENGTDMHVMDLQRDANRQISDLKFKL--AKSEQEITALEQNVI 571 Query: 575 HYKFIVDYCEKHPEAAQEIEVELELSK 601 + V + E A++IE EL+ K Sbjct: 572 RLESQVSRYKSAAENAEKIEDELKAEK 598 >gi|19923493 pleckstrin homology domain containing, family A member 5 isoform 1 [Homo sapiens] Length = 1116 Score = 30.8 bits (68), Expect = 3.9 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%) Query: 309 EIARCW-----IKYCLTLMQNAQLSMQDNIGELDLDKQSELRALRKKEL----DEEESIR 359 E+ R W ++Y +T+ +N D++GE+ + RA +KEL D E + Sbjct: 714 ELERAWREYDKLEYDVTVTRNQMQEQLDHLGEVQTESAGIQRAQIQKELWRIQDVMEGLS 773 Query: 360 KKAVQFGTGEL 370 K Q GT E+ Sbjct: 774 KHKQQRGTTEI 784 >gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens] Length = 2161 Score = 30.8 bits (68), Expect = 3.9 Identities = 48/206 (23%), Positives = 75/206 (36%), Gaps = 37/206 (17%) Query: 44 EEVKALLGPAPEDEDERPEAEDGPGAGDHAL-----GLPAEVVEPEGPVAQRAVRLAVIE 98 +E + PE E + DGPG G G P + G + Sbjct: 10 DEERHSASECPEGGSESDSSPDGPGRGPRGTRGQGSGAPGSLASVRGLQGRSMSVPDDAH 69 Query: 99 FHLGVNHIDTEELSAGEEHLVKCLRLLRRYRLSHDCISLCIQAQNNLGILWSEREEIETA 158 F + V I +L H KCLR N +W+ ++++ A Sbjct: 70 FSMMVFRIGIPDL-----HQTKCLRF------------------NPDATIWTAKQQVLCA 106 Query: 159 QAYLESSEALYNQYMKEVGSPPLDPTERFLPEEEKLTEQERSKRFEKVYTH-NLYYLAQV 217 + ES + + N + + + D FL EE L E +S FEK + Y +V Sbjct: 107 LS--ESLQDVLNYGLFQPATSGRD--ANFLEEERLLREYPQS--FEKGVPYLEFRYKTRV 160 Query: 218 YQHLEMFEKAAHYCHST--LKRQLEH 241 Y+ + EK H+ LK+ LE+ Sbjct: 161 YKQTNLDEKQLAKLHTKTGLKKFLEY 186 >gi|93141214 sodium channel, voltage-gated, type II, alpha isoform 2 [Homo sapiens] Length = 2005 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 268 EARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQL 327 E++ L+A + G T I A AEGE PE+ + E C+ + C+ + Q+ Sbjct: 1130 ESKEKLNATSSSEGSTVDIGAP-----AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQI 1184 Query: 328 SMQDNIGEL 336 S+++ G+L Sbjct: 1185 SIEEGKGKL 1193 >gi|93141212 sodium channel, voltage-gated, type II, alpha isoform 1 [Homo sapiens] Length = 2005 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 268 EARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQL 327 E++ L+A + G T I A AEGE PE+ + E C+ + C+ + Q+ Sbjct: 1130 ESKEKLNATSSSEGSTVDIGAP-----AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQI 1184 Query: 328 SMQDNIGEL 336 S+++ G+L Sbjct: 1185 SIEEGKGKL 1193 >gi|93141210 sodium channel, voltage-gated, type II, alpha isoform 1 [Homo sapiens] Length = 2005 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 268 EARHCLSAANVIFGQTGKISATEDTPEAEGEVPELYHQRKGEIARCWIKYCLTLMQNAQL 327 E++ L+A + G T I A AEGE PE+ + E C+ + C+ + Q+ Sbjct: 1130 ESKEKLNATSSSEGSTVDIGAP-----AEGEQPEVEPEESLEPEACFTEDCVRKFKCCQI 1184 Query: 328 SMQDNIGEL 336 S+++ G+L Sbjct: 1185 SIEEGKGKL 1193 >gi|33946304 solute carrier family 8 (sodium/calcium exchanger), member 3 isoform D precursor [Homo sapiens] Length = 921 Score = 30.4 bits (67), Expect = 5.1 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 14/133 (10%) Query: 330 QDNIGELDLDKQSELRALRKKELDEEESIRKKAVQFGTGELCDAISAVEEKVSYLRPLDF 389 +D GEL+ ++ +R K +DEEE R++ GE + + ++ Sbjct: 581 EDTYGELEFKNDETVKTIRVKIVDEEEYERQENFFIALGEPKWMERGISDVTDRKLTMEE 640 Query: 390 EEARELFLLGQHYVFEAKEFFQIDGYVTDHIEVVQDHSALFKVLA---FFETDMERRCKM 446 EEA+ + +G+ + E + +EV+ + S FK +T++ Sbjct: 641 EEAKRIAEMGKPVLGEHPK-----------LEVIIEESYEFKTTVDKLIKKTNLALVVGT 689 Query: 447 HKRRIAMLEPLTV 459 H R +E +TV Sbjct: 690 HSWRDQFMEAITV 702 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,263,286 Number of Sequences: 37866 Number of extensions: 1067069 Number of successful extensions: 4321 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 43 Number of HSP's that attempted gapping in prelim test: 4259 Number of HSP's gapped (non-prelim): 109 length of query: 621 length of database: 18,247,518 effective HSP length: 108 effective length of query: 513 effective length of database: 14,157,990 effective search space: 7263048870 effective search space used: 7263048870 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.