Guide to the Human Genome
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Name: KIAA1279 Sequence: fasta or formatted (621aa) NCBI GI: 24308113
Description:

KIF1 binding protein

Referenced in:

Kinesins
Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         57           2
 C cysteine            1.9         12           1
 D aspartate           4.7         29           1
 E glutamate          12.4         77           3
 F phenylalanine       3.7         23           2
 G glycine             3.4         21           1
 H histidine           3.7         23           1
 I isoleucine          4.7         29           2
 K lysine              6.8         42           2
 L leucine            11.8         73           2
 M methionine          2.4         15           2
 N asparagine          3.2         20           2
 P proline             4.3         27           2
 Q glutamine           4.2         26           1
 R arginine            5.6         35           2
 S serine              4.3         27           2
 T threonine           3.2         20           1
 V valine              5.5         34           2
 W tryptophan          0.6          4           1
 Y tyrosine            4.3         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIF1 binding protein 
CEP164                0.011   centrosomal protein 164kDa 
KIF3A                 0.008   kinesin family member 3A 
LSP1                  0.007   lymphocyte-specific protein 1 isoform 2 
LSP1                  0.007   lymphocyte-specific protein 1 isoform 2 
LSP1                  0.007   lymphocyte-specific protein 1 isoform 2 
LSP1                  0.007   lymphocyte-specific protein 1 isoform 1 
SPTLC1                0.007   serine palmitoyltransferase subunit 1 isoform a [Homo...
RNF20                 0.007   ring finger protein 20 
NASP                  0.006   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.006   nuclear autoantigenic sperm protein isoform 1 
NASP                  0.006   nuclear autoantigenic sperm protein isoform 3 
SRCAP                 0.006   Snf2-related CBP activator protein 
DIXDC1                0.006   DIX domain containing 1 isoform b 
DIXDC1                0.006   DIX domain containing 1 isoform a 
C2orf77               0.006   hypothetical protein LOC129881 
HIP1R                 0.005   huntingtin interacting protein-1-related 
LOC100294412          0.005   PREDICTED: similar to KIAA0655 protein 
WDHD1                 0.005   WD repeat and HMG-box DNA binding protein 1 isoform ...
WDHD1                 0.005   WD repeat and HMG-box DNA binding protein 1 isoform 1...
NISCH                 0.005   nischarin 
C12orf71              0.005   hypothetical protein LOC728858 
MEX3D                 0.005   ring finger and KH domain containing 1 
LRRFIP1               0.005   leucine rich repeat (in FLII) interacting protein 1...
PLEKHA5               0.005   pleckstrin homology domain containing, family A memb...
SHANK1                0.005   SH3 and multiple ankyrin repeat domains 1 
SCN2A                 0.004   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.004   sodium channel, voltage-gated, type II, alpha isofor...
SCN2A                 0.004   sodium channel, voltage-gated, type II, alpha isofor...
SLC8A3                0.004   solute carrier family 8 (sodium/calcium exchanger), ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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