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Search of human proteins with 240849359
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|240849359 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform f [Homo sapiens]
(540 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|240849359 gamma isoform of regulatory subunit B56, protein ph... 1085 0.0
gi|240849353 gamma isoform of regulatory subunit B56, protein ph... 954 0.0
gi|31083236 gamma isoform of regulatory subunit B56, protein pho... 926 0.0
gi|31083259 gamma isoform of regulatory subunit B56, protein pho... 906 0.0
gi|31083243 gamma isoform of regulatory subunit B56, protein pho... 839 0.0
gi|5453954 delta isoform of regulatory subunit B56, protein phos... 838 0.0
gi|31083280 delta isoform of regulatory subunit B56, protein pho... 789 0.0
gi|31083288 delta isoform of regulatory subunit B56, protein pho... 775 0.0
gi|5453956 epsilon isoform of regulatory subunit B56, protein ph... 626 e-179
gi|5453950 protein phosphatase 2, regulatory subunit B (B56), al... 624 e-179
gi|5453952 beta isoform of regulatory subunit B56, protein phosp... 607 e-173
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 36 0.078
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 34 0.39
gi|4505727 peroxisomal biogenesis factor 3 [Homo sapiens] 34 0.39
gi|87299628 biorientation of chromosomes in cell division 1-like... 33 0.51
gi|114326455 chromodomain helicase DNA binding protein 8 [Homo s... 32 1.1
gi|7657625 staufen homolog 2 [Homo sapiens] 32 1.1
gi|148746195 trichohyalin [Homo sapiens] 32 1.5
gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo... 32 1.5
gi|41281398 soc-2 suppressor of clear homolog [Homo sapiens] 32 1.5
gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo s... 32 1.9
gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo s... 32 1.9
gi|5453974 protein kinase N2 [Homo sapiens] 32 1.9
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 32 1.9
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 32 1.9
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 32 1.9
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 32 1.9
gi|168823435 hypothetical protein LOC79747 [Homo sapiens] 32 1.9
gi|222080092 WD repeat domain 91 [Homo sapiens] 31 2.5
gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens] 31 2.5
>gi|240849359 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform f [Homo sapiens]
Length = 540
Score = 1085 bits (2807), Expect = 0.0
Identities = 540/540 (100%), Positives = 540/540 (100%)
Query: 1 MPNKNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIV 60
MPNKNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIV
Sbjct: 1 MPNKNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIV 60
Query: 61 KKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKW 120
KKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKW
Sbjct: 61 KKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKW 120
Query: 121 KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP 180
KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP
Sbjct: 121 KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP 180
Query: 181 TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTT 240
TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTT
Sbjct: 181 TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTT 240
Query: 241 LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI 300
LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI
Sbjct: 241 LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI 300
Query: 301 FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL 360
FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL
Sbjct: 301 FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL 360
Query: 361 NELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAK 420
NELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAK
Sbjct: 361 NELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAK 420
Query: 421 ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKE 480
ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKE
Sbjct: 421 ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKE 480
Query: 481 REEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 540
REEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
Sbjct: 481 REEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 540
>gi|240849353 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform e [Homo sapiens]
Length = 555
Score = 954 bits (2467), Expect = 0.0
Identities = 492/579 (84%), Positives = 497/579 (85%), Gaps = 63/579 (10%)
Query: 1 MPNKNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIV 60
MPNKNKKEKESPKAGKSGKSSKEGQDTVESE S + S VP + ++ V +
Sbjct: 1 MPNKNKKEKESPKAGKSGKSSKEGQDTVESEGTSPEEPSSPKVPPPLLPELLVLI----- 55
Query: 61 KKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKW 120
F R DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKW
Sbjct: 56 ----------FGGLQGR---------DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKW 96
Query: 121 KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP 180
KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP
Sbjct: 97 KEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEP 156
Query: 181 TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTT 240
TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTT
Sbjct: 157 TLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTT 216
Query: 241 LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI 300
LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI
Sbjct: 217 LHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKI 276
Query: 301 FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL 360
FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL
Sbjct: 277 FLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFL 336
Query: 361 NELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAK 420
NELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAK
Sbjct: 337 NELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAK 396
Query: 421 ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKE 480
ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKE
Sbjct: 397 ILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKE 456
Query: 481 REEAWVKIENLAKANP---------------------------------------QAQKD 501
REEAWVKIENLAKANP QAQKD
Sbjct: 457 REEAWVKIENLAKANPQYTVYSQASTMSIPVAMETDGPLFEDVQMLRKTVKDEAHQAQKD 516
Query: 502 PKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 540
PKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
Sbjct: 517 PKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 555
>gi|31083236 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform b [Homo sapiens]
Length = 485
Score = 926 bits (2392), Expect = 0.0
Identities = 458/471 (97%), Positives = 463/471 (98%), Gaps = 2/471 (0%)
Query: 72 SASNNRELQK--LPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 129
+A++N Q L ++DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS
Sbjct: 15 AANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 74
Query: 130 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 189
EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL
Sbjct: 75 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 134
Query: 190 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 249
QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL
Sbjct: 135 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 194
Query: 250 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 309
GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL
Sbjct: 195 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 254
Query: 310 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 369
HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV
Sbjct: 255 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 314
Query: 370 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 429
IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL
Sbjct: 315 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 374
Query: 430 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 489
YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE
Sbjct: 375 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 434
Query: 490 NLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 540
NLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR
Sbjct: 435 NLAKANPQAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADELASQDGR 485
>gi|31083259 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform a [Homo sapiens]
Length = 524
Score = 906 bits (2342), Expect = 0.0
Identities = 458/510 (89%), Positives = 463/510 (90%), Gaps = 41/510 (8%)
Query: 72 SASNNRELQK--LPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 129
+A++N Q L ++DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS
Sbjct: 15 AANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 74
Query: 130 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 189
EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL
Sbjct: 75 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 134
Query: 190 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 249
QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL
Sbjct: 135 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 194
Query: 250 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 309
GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL
Sbjct: 195 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 254
Query: 310 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 369
HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV
Sbjct: 255 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 314
Query: 370 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 429
IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL
Sbjct: 315 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 374
Query: 430 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 489
YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE
Sbjct: 375 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 434
Query: 490 NLAKANP---------------------------------------QAQKDPKKDRPLAR 510
NLAKANP QAQKDPKKDRPLAR
Sbjct: 435 NLAKANPQYTVYSQASTMSIPVAMETDGPLFEDVQMLRKTVKDEAHQAQKDPKKDRPLAR 494
Query: 511 RKSELPQDPHTKKALEAHCRADELASQDGR 540
RKSELPQDPHTKKALEAHCRADELASQDGR
Sbjct: 495 RKSELPQDPHTKKALEAHCRADELASQDGR 524
>gi|31083243 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform c [Homo sapiens]
Length = 449
Score = 839 bits (2168), Expect = 0.0
Identities = 416/431 (96%), Positives = 421/431 (97%), Gaps = 2/431 (0%)
Query: 72 SASNNRELQK--LPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 129
+A++N Q L ++DVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS
Sbjct: 15 AANSNGPFQPVVLLHIRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALS 74
Query: 130 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 189
EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL
Sbjct: 75 EMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHL 134
Query: 190 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 249
QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL
Sbjct: 135 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFL 194
Query: 250 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 309
GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL
Sbjct: 195 GLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPL 254
Query: 310 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 369
HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV
Sbjct: 255 HKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDV 314
Query: 370 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 429
IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL
Sbjct: 315 IEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL 374
Query: 430 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 489
YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE
Sbjct: 375 YRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIE 434
Query: 490 NLAKANPQAQK 500
NLAKANPQ K
Sbjct: 435 NLAKANPQVLK 445
>gi|5453954 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 1 [Homo sapiens]
Length = 602
Score = 838 bits (2166), Expect = 0.0
Identities = 435/600 (72%), Positives = 482/600 (80%), Gaps = 62/600 (10%)
Query: 1 MPNKNKKEKESPKAGK-SGKSSKEGQD-----TVESEQ---------------ISVRKNS 39
MP K KKEKE PK K + K S G+D T E++ S ++ S
Sbjct: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKDGGGENTEEAQPQPQPQPQPQAQSQPPSSNKRPS 60
Query: 40 LVAVPSTVSAKIKVPVSQPIVKKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQ 99
P T +KIK IVKK++RQ+SSRF+ S NRELQKLP+LKD P ++E+LFIQ
Sbjct: 61 NSTPPPTQLSKIKYSGGPQIVKKERRQSSSRFNLSKNRELQKLPALKDSPTQEREELFIQ 120
Query: 100 KLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMF 159
KLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE IYPE V MF+VN+F
Sbjct: 121 KLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLF 180
Query: 160 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 219
RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV
Sbjct: 181 RTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFV 240
Query: 220 LQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAEL 279
L LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFYRFIYETEHHNGIAEL
Sbjct: 241 LALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAEL 300
Query: 280 LEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEP 339
LEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK+S+LTEP
Sbjct: 301 LEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEP 360
Query: 340 VVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAE 399
V++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFRQLAKCVSSPHFQVAE
Sbjct: 361 VIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAE 420
Query: 400 RALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKL 459
RALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGLIYNALKLFMEMNQKL
Sbjct: 421 RALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKL 480
Query: 460 FDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANP----------------------- 496
FDDCTQQ+KAEK K + +MKEREE W KIE LA+ NP
Sbjct: 481 FDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPT 540
Query: 497 ----------------QAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADEL--ASQD 538
Q KD KK++ L RRKSELPQD +T KALEAH RA+E ASQ+
Sbjct: 541 AEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 600
>gi|31083280 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 2 [Homo sapiens]
Length = 570
Score = 789 bits (2038), Expect = 0.0
Identities = 415/584 (71%), Positives = 459/584 (78%), Gaps = 62/584 (10%)
Query: 1 MPNKNKKEKESPKAGK-SGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPI 59
MP K KKEKE PK K + K S G+D +N+ A P P QP
Sbjct: 1 MPYKLKKEKEPPKVAKCTAKPSSSGKD-------GGGENTEEAQPQ--------PQPQPQ 45
Query: 60 VKKDKRQNSSRFSASNNR----ELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPL 115
+ + SS SN+ +L K+ P +++LFIQKLRQCCVLFDFVSDPL
Sbjct: 46 PQAQSQPPSSNKRPSNSTPPPTQLSKI-KYSGGPQIVKKELFIQKLRQCCVLFDFVSDPL 104
Query: 116 SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP 175
SDLK+KEVKRA L+EMVEYITH+R+V+TE IYPE V MF+VN+FRTLPPSSNPTGAEFDP
Sbjct: 105 SDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVTMFSVNLFRTLPPSSNPTGAEFDP 164
Query: 176 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERD 235
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVL LL+LFDSEDPRERD
Sbjct: 165 EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLALLDLFDSEDPRERD 224
Query: 236 FLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 295
FLKT LHRIYGKFLGLRAYIR+QIN+IFYRFIYETEHHNGIAELLEILGSIINGFALPLK
Sbjct: 225 FLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEHHNGIAELLEILGSIINGFALPLK 284
Query: 296 EEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK 355
EEHK+FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK+S+LTEPV++ LLK+WPKTHSPK
Sbjct: 285 EEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEKESSLTEPVIVGLLKFWPKTHSPK 344
Query: 356 EVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 415
EVMFLNELEEILDVIEPSEF K+MEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
Sbjct: 345 EVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS 404
Query: 416 DNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEK 475
DNAA++LPIMFP+LYRNSK+HWNKTIHGLIYNALKLFMEMNQKLFDDCTQQ+KAEK K +
Sbjct: 405 DNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGR 464
Query: 476 LKMKEREEAWVKIENLAKANP--------------------------------------- 496
+MKEREE W KIE LA+ NP
Sbjct: 465 FRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYSMETETPTAEDIQLLKRTVETEAV 524
Query: 497 QAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADEL--ASQD 538
Q KD KK++ L RRKSELPQD +T KALEAH RA+E ASQ+
Sbjct: 525 QMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEEFLTASQE 568
>gi|31083288 delta isoform of regulatory subunit B56, protein
phosphatase 2A isoform 3 [Homo sapiens]
Length = 496
Score = 775 bits (2001), Expect = 0.0
Identities = 387/487 (79%), Positives = 422/487 (86%), Gaps = 41/487 (8%)
Query: 93 QEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVH 152
+++LFIQKLRQCCVLFDFVSDPLSDLK+KEVKRA L+EMVEYITH+R+V+TE IYPE V
Sbjct: 8 EKELFIQKLRQCCVLFDFVSDPLSDLKFKEVKRAGLNEMVEYITHSRDVVTEAIYPEAVT 67
Query: 153 MFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKK 212
MF+VN+FRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKK
Sbjct: 68 MFSVNLFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKK 127
Query: 213 YIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEH 272
YIDQKFVL LL+LFDSEDPRERDFLKT LHRIYGKFLGLRAYIR+QIN+IFYRFIYETEH
Sbjct: 128 YIDQKFVLALLDLFDSEDPRERDFLKTILHRIYGKFLGLRAYIRRQINHIFYRFIYETEH 187
Query: 273 HNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEK 332
HNGIAELLEILGSIINGFALPLKEEHK+FL++VLLPLHKVKSLSVYHPQLAYCVVQFLEK
Sbjct: 188 HNGIAELLEILGSIINGFALPLKEEHKMFLIRVLLPLHKVKSLSVYHPQLAYCVVQFLEK 247
Query: 333 DSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSS 392
+S+LTEPV++ LLK+WPKTHSPKEVMFLNELEEILDVIEPSEF K+MEPLFRQLAKCVSS
Sbjct: 248 ESSLTEPVIVGLLKFWPKTHSPKEVMFLNELEEILDVIEPSEFSKVMEPLFRQLAKCVSS 307
Query: 393 PHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLF 452
PHFQVAERALYYWNNEYIMSLISDNAA++LPIMFP+LYRNSK+HWNKTIHGLIYNALKLF
Sbjct: 308 PHFQVAERALYYWNNEYIMSLISDNAARVLPIMFPALYRNSKSHWNKTIHGLIYNALKLF 367
Query: 453 MEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENLAKANP---------------- 496
MEMNQKLFDDCTQQ+KAEK K + +MKEREE W KIE LA+ NP
Sbjct: 368 MEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEELARLNPQYPMFRAPPPLPPVYS 427
Query: 497 -----------------------QAQKDPKKDRPLARRKSELPQDPHTKKALEAHCRADE 533
Q KD KK++ L RRKSELPQD +T KALEAH RA+E
Sbjct: 428 METETPTAEDIQLLKRTVETEAVQMLKDIKKEKVLLRRKSELPQDVYTIKALEAHKRAEE 487
Query: 534 L--ASQD 538
ASQ+
Sbjct: 488 FLTASQE 494
>gi|5453956 epsilon isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 467
Score = 626 bits (1615), Expect = e-179
Identities = 308/432 (71%), Positives = 364/432 (84%), Gaps = 5/432 (1%)
Query: 61 KKDKRQNSSRFSASNNR-ELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLK 119
++ + Q+SS+F + EL LP LKDVP ++Q +LF++KL+QCCV+FDF+ D LSDLK
Sbjct: 26 RQKRSQSSSQFRSQGKPIELTPLPLLKDVPSSEQPELFLKKLQQCCVIFDFM-DTLSDLK 84
Query: 120 WKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDE 179
KE KR+ L+E+V+YIT +R +TE YPEVV M + N+FRTLPPS + EFDPEEDE
Sbjct: 85 MKEYKRSTLNELVDYITISRGCLTEQTYPEVVRMVSCNIFRTLPPSDSN---EFDPEEDE 141
Query: 180 PTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKT 239
PTLEA+WPHLQLVYEFF+RFLES +FQP+IAKKYIDQKFVLQLLELFDSEDPRERD+LKT
Sbjct: 142 PTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKFVLQLLELFDSEDPRERDYLKT 201
Query: 240 TLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHK 299
LHRIYGKFLGLRA+IRKQINNIF RF+YETEH NG+AELLEILGSIINGFALPLK EHK
Sbjct: 202 VLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAELLEILGSIINGFALPLKAEHK 261
Query: 300 IFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMF 359
FL+KVL+PLH V+SLS++H QLAYC+VQFLEKD +LTEPV+ L+K+WPKT S KEVMF
Sbjct: 262 QFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPSLTEPVIRGLMKFWPKTCSQKEVMF 321
Query: 360 LNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAA 419
L ELEEILDVIEPS+FVKI EPLF+Q+AKCVSSPHFQVAERALYYWNNEYIMSLI +N+
Sbjct: 322 LGELEEILDVIEPSQFVKIQEPLFKQIAKCVSSPHFQVAERALYYWNNEYIMSLIEENSN 381
Query: 420 KILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMK 479
ILPIMF SLYR SK HWN I L+YN LK FMEMN +FD+ T +K+++ +EK K K
Sbjct: 382 VILPIMFSSLYRISKEHWNPAIVALVYNVLKAFMEMNSTMFDELTATYKSDRQREKKKEK 441
Query: 480 EREEAWVKIENL 491
EREE W K+E+L
Sbjct: 442 EREELWKKLEDL 453
>gi|5453950 protein phosphatase 2, regulatory subunit B (B56), alpha
isoform [Homo sapiens]
Length = 486
Score = 624 bits (1610), Expect = e-179
Identities = 314/456 (68%), Positives = 369/456 (80%), Gaps = 10/456 (2%)
Query: 42 AVPSTVSAKIKVP-VSQPIVKKDKRQN----SSRF-SASNNRELQKLPSLKDVPPADQEK 95
A + +SA KV ++ V+K +RQ SS+F S + EL LP LKD +Q++
Sbjct: 10 AASAAISASEKVDGFTRKSVRKAQRQKRSQGSSQFRSQGSQAELHPLPQLKDATSNEQQE 69
Query: 96 LFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFA 155
LF QKL+QCC+LFDF+ D +SDLK KE+KRA L+E+VEY++ NR VI E Y ++V M +
Sbjct: 70 LFCQKLQQCCILFDFM-DSVSDLKSKEIKRATLNELVEYVSTNRGVIVESAYSDIVKMIS 128
Query: 156 VNMFRTLPPSSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYID 215
N+FRTLPPS NP +FDPEEDEPTLEA+WPH+QLVYEFFLRFLESPDFQP+IAK+YID
Sbjct: 129 ANIFRTLPPSDNP---DFDPEEDEPTLEASWPHIQLVYEFFLRFLESPDFQPSIAKRYID 185
Query: 216 QKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNG 275
QKFV QLLELFDSEDPRERDFLKT LHRIYGKFLGLRA+IRKQINNIF RFIYETEH NG
Sbjct: 186 QKFVQQLLELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNG 245
Query: 276 IAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDST 335
+AELLEILGSIINGFALPLK EHK FL+KVL+P+H K L+++H QLAYCVVQFLEKD+T
Sbjct: 246 VAELLEILGSIINGFALPLKAEHKQFLMKVLIPMHTAKGLALFHAQLAYCVVQFLEKDTT 305
Query: 336 LTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHF 395
LTEPV+ LLK+WPKT S KEVMFL E+EEILDVIEP++F KI EPLF+Q++KCVSS HF
Sbjct: 306 LTEPVIRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPTQFKKIEEPLFKQISKCVSSSHF 365
Query: 396 QVAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEM 455
QVAERALY+WNNEYI+SLI +N KILPIMF SLY+ SK HWN TI L+YN LK MEM
Sbjct: 366 QVAERALYFWNNEYILSLIEENIDKILPIMFASLYKISKEHWNPTIVALVYNVLKTLMEM 425
Query: 456 NQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIENL 491
N KLFDD T +KAE+ +EK K EREE W K+E L
Sbjct: 426 NGKLFDDLTSSYKAERQREKKKELEREELWKKLEEL 461
>gi|5453952 beta isoform of regulatory subunit B56, protein
phosphatase 2A [Homo sapiens]
Length = 497
Score = 607 bits (1564), Expect = e-173
Identities = 302/448 (67%), Positives = 362/448 (80%), Gaps = 6/448 (1%)
Query: 64 KRQNSSRFS-ASNNRELQKLPSLKDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKE 122
+ +SS+F SN +EL LP LKDVP ++ +L +KL QC V+FDF+ D ++DLK KE
Sbjct: 43 RSHSSSQFRYQSNQQELTPLPLLKDVPASELHELLSRKLAQCGVMFDFL-DCVADLKGKE 101
Query: 123 VKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTL 182
VKRAAL+E+VE + R V+ EP+YP+++ M +VN+FRTLPPS NP EFDPEEDEP L
Sbjct: 102 VKRAALNELVECVGSTRGVLIEPVYPDIIRMISVNIFRTLPPSENP---EFDPEEDEPNL 158
Query: 183 EAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLH 242
E +WPHLQLVYEFFLRFLESPDFQP++AK+Y+DQKFVL LLELFDSEDPRER++LKT LH
Sbjct: 159 EPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDSEDPREREYLKTILH 218
Query: 243 RIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFL 302
R+YGKFLGLRAYIRKQ N+IF RFIYE EH NG+AELLEILGSIINGFALPLK EHK FL
Sbjct: 219 RVYGKFLGLRAYIRKQCNHIFLRFIYEFEHFNGVAELLEILGSIINGFALPLKTEHKQFL 278
Query: 303 LKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNE 362
++VL+PLH VKSLSV+H QLAYCVVQFLEKD+TLTE V+ LLKYWPKT + KEVMFL E
Sbjct: 279 VRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGE 338
Query: 363 LEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKIL 422
+EEILDVIEPS+FVKI EPLF+Q+A+CVSSPHFQVAERALY+WNNEYI+SLI DN +L
Sbjct: 339 MEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVL 398
Query: 423 PIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKERE 482
P +F +LY+ SK HWN+TI LIYN LK FMEMN KLFD+ T +K EK +E+ K +ER+
Sbjct: 399 PAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLEKQQEQQKAQERQ 458
Query: 483 EAWVKIENLAKANPQAQKDPKKDRPLAR 510
E W +E L Q + K+ PL R
Sbjct: 459 ELWQGLEELRLRRLQGTQG-AKEAPLQR 485
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 36.2 bits (82), Expect = 0.078
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 4 KNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAK---IKVPVSQPIV 60
K KKE + PK K+ K KE ++ K + A P S+K K P S+
Sbjct: 660 KEKKEPKEPKTPKAPKIPKEPKE----------KKAKTATPKPKSSKKSSNKKPDSEASA 709
Query: 61 KKDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLR 102
K K+ N + S N +L K P PP + E +QK R
Sbjct: 710 LK-KKVNKGKTEGSENSDLDKTPP-PSPPPEEDEDPGVQKRR 749
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 33.9 bits (76), Expect = 0.39
Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 31/195 (15%)
Query: 354 PKEVM-----FLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNE 408
PKE++ FLN E+ V S+ +M+ + +++C + N
Sbjct: 8 PKELLKGLDSFLNRDGEVKSVDGISKIFSLMKEARKMVSRCT--------------YLNI 53
Query: 409 YIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFK 468
+ + + K + + L N T+ T + + + L ++ D Q
Sbjct: 54 LLQTRSPEILVKFIDVGGYKLLNNWLTYSKTTNNIPLLQQILLTLQHLPLTVDHLKQNNT 113
Query: 469 AEKLKEKLKMKEREEA----------WVKIENLAKANPQAQKDPKKDRPLARRKSELPQD 518
A+ +K+ K E EE W+ + + A+KD KK + + ++ LP+
Sbjct: 114 AKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSSTQPAEKDKKKRKDEGKSRTTLPER 173
Query: 519 PHTKKALEAHCRADE 533
P T+ ++A RA+E
Sbjct: 174 PLTE--VKAETRAEE 186
>gi|4505727 peroxisomal biogenesis factor 3 [Homo sapiens]
Length = 373
Score = 33.9 bits (76), Expect = 0.39
Identities = 33/163 (20%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 274 NGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKD 333
+G+ EL+ ++ + + +H + LL + L ++++L H ++ + KD
Sbjct: 174 DGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQHKSSSW-----INKD 228
Query: 334 STLTEPVVMALLKYWPKTH--------SPKEVMFLNELEEILDVIEPSEFVKIMEP-LFR 384
+ +P++ + +T SP+++ + L E D++E +F ++ L R
Sbjct: 229 GS--KPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDFSTVLNTCLNR 286
Query: 385 QLAKCVSS--PHFQVAERALYYWNNEYIMSLISDNAAKILPIM 425
++ + + F+ E+ L + N+ +S +S AKI+PI+
Sbjct: 287 GFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIV 329
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.5 bits (75), Expect = 0.51
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 4 KNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKD 63
KN +E +S K KS K ++T + +S + S + K+P+++ K D
Sbjct: 945 KNTEENDSEKQRKSKVEDKPFEETGVEPVLETASSSAHSTQKDSSHRAKLPLAKEKYKSD 1004
Query: 64 KRQNSSRFS---ASNNRELQKLPSLKDVPPADQEK 95
K S+R + ++ S KD+ D+ K
Sbjct: 1005 KDSTSTRLERKLSDGHKSRSLKHSSKDIKKKDENK 1039
>gi|114326455 chromodomain helicase DNA binding protein 8 [Homo
sapiens]
Length = 2302
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 5 NKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKDK 64
N+ E S + + G+ + + E + K S + S K K+ P+V K +
Sbjct: 206 NEDELPSVRPEEEGEKKRRKKSAGERLKEEKPKKSKTSGASKTKGKSKLNTITPVVGKKR 265
Query: 65 RQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLR 102
++N+S S+N +++ +P+ P + E+ IQK R
Sbjct: 266 KRNTS----SDNSDVEVMPAQS---PREDEESSIQKRR 296
>gi|7657625 staufen homolog 2 [Homo sapiens]
Length = 479
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
Query: 9 KESPKAGKSGKSSKEGQDTVESE-----QISVRKNSLVAV--------PSTVSAKIKVPV 55
+ SP+ G+SGK + +D +SE +I++++N V+ P S +V V
Sbjct: 154 ERSPQNGESGKDMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSV 213
Query: 56 SQPIVK---KDKRQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQK 100
+ + K+ + R + + +EL+KLP L P ++ KLF +K
Sbjct: 214 GEFSAEGEGNSKKLSKKRAATTVLQELKKLPPL---PVVEKPKLFFKK 258
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.0 bits (71), Expect = 1.5
Identities = 16/73 (21%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 464 TQQFKAEKLKEKLKM---KEREEAWVKIENLAKANPQAQKDPKKDRPLARRKSELPQDPH 520
T++ + E+ K++LK +ER E W+K+E + Q +++ + R R+ + +
Sbjct: 464 TERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQE 523
Query: 521 TKKALEAHCRADE 533
++ L+ R+++
Sbjct: 524 EEERLQQRLRSEQ 536
>gi|91176325 bromodomain adjacent to zinc finger domain, 2A [Homo
sapiens]
Length = 1905
Score = 32.0 bits (71), Expect = 1.5
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 468 KAEKLKEKLKMKEREEAWVK-IENLAKANP--QAQKDPKKDRPLARRKSELPQDPHTKKA 524
K EKLKEK+K +++E+ +K E + KA P +A K R L R+ + KK
Sbjct: 764 KQEKLKEKVKREKKEKVKMKEKEEVTKAKPACKADKTLATQRRLEERQRQQMILEEMKKP 823
Query: 525 LEAHCRAD 532
E C D
Sbjct: 824 TEDMCLTD 831
>gi|41281398 soc-2 suppressor of clear homolog [Homo sapiens]
Length = 582
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 1 MPNKNKKEKESPKAGKSGKSSKEGQDTVESEQI-SVRKNSLVAVPS---TVSAKIKVPVS 56
+P+ ++EKE+ +G GK SKE + + + +K+S A P +V IK P
Sbjct: 18 VPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAAQPGVAFSVDNTIKRPNP 77
Query: 57 QP----------IVK---KDKRQNSSRFSASNNRELQKLP-SLKDVPPADQEKLFIQKLR 102
P ++K K + +NS R S R + LP S+K++ + L+ KL+
Sbjct: 78 APGTRKKSSNAEVIKELNKCREENSMRLDLS-KRSIHILPSSIKELTQLTELYLYSNKLQ 136
>gi|254039614 coiled-coil domain containing 120 isoform 4 [Homo
sapiens]
Length = 618
Score = 31.6 bits (70), Expect = 1.9
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 453 MEMNQKLFDDCTQQFKAEKLKEKLKMKE--REEAWVKIENLAKA-----------NPQAQ 499
ME+ LF + Q K+E+L+ L + +E +K++ L K P+
Sbjct: 1 MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP 60
Query: 500 KDPKKDRPLARRKSELPQ---DPHTKKALEAHCRADELA 535
+P + L RR+ + PH +A + C A+ELA
Sbjct: 61 LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELA 99
>gi|254039612 coiled-coil domain containing 120 isoform 2 [Homo
sapiens]
Length = 649
Score = 31.6 bits (70), Expect = 1.9
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 453 MEMNQKLFDDCTQQFKAEKLKEKLKMKE--REEAWVKIENLAKA-----------NPQAQ 499
ME+ LF + Q K+E+L+ L + +E +K++ L K P+
Sbjct: 1 MEVKAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPECP 60
Query: 500 KDPKKDRPLARRKSELPQ---DPHTKKALEAHCRADELA 535
+P + L RR+ + PH +A + C A+ELA
Sbjct: 61 LEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELA 99
>gi|5453974 protein kinase N2 [Homo sapiens]
Length = 984
Score = 31.6 bits (70), Expect = 1.9
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 457 QKL-FDDCTQQFKAEKLKEKLKMKEREEAWVK--IENLAKANPQAQKDPKKDRPLARRKS 513
QKL F D Q K + +K+++K + R+E +K ENL K + D L +
Sbjct: 32 QKLDFSDTMVQQKLDDIKDRIKREIRKELKIKEGAENLRKVTTDKKSLAYVDNILKKSNK 91
Query: 514 ELPQDPHTKKALEAH 528
+L + H + L AH
Sbjct: 92 KLEELHHKLQELNAH 106
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 31.6 bits (70), Expect = 1.9
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 30 SEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKDKRQNSSRFSASNNRELQKLPSLKDVP 89
+E V NS TV K K+ V P+ KKDKR +S SA +N + KLP K
Sbjct: 630 TETNPVTSNSDEECNETVKEKQKLSV--PVRKKDKRNSSD--SAIDNPKPNKLPKSKQSE 685
Query: 90 PADQ 93
DQ
Sbjct: 686 TVDQ 689
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 31.6 bits (70), Expect = 1.9
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 30 SEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKDKRQNSSRFSASNNRELQKLPSLKDVP 89
+E V NS TV K K+ V P+ KKDKR +S SA +N + KLP K
Sbjct: 668 TETNPVTSNSDEECNETVKEKQKLSV--PVRKKDKRNSSD--SAIDNPKPNKLPKSKQSE 723
Query: 90 PADQ 93
DQ
Sbjct: 724 TVDQ 727
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 4 KNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKD 63
K+K+E++ PKA K K+ ++ + S++ ++ K + + + P S+P +KK
Sbjct: 970 KDKRERDKPKA-KGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKA 1028
Query: 64 KRQNSSRFSASNNRELQKLPSLKDVP 89
K + + ++ QK + P
Sbjct: 1029 KEETPKTDNTKSSSSSQKDEKITGTP 1054
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 4 KNKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKD 63
K+K+E++ PKA K K+ ++ + S++ ++ K + + + P S+P +KK
Sbjct: 1004 KDKRERDKPKA-KGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKA 1062
Query: 64 KRQNSSRFSASNNRELQKLPSLKDVP 89
K + + ++ QK + P
Sbjct: 1063 KEETPKTDNTKSSSSSQKDEKITGTP 1088
>gi|168823435 hypothetical protein LOC79747 [Homo sapiens]
Length = 1667
Score = 31.6 bits (70), Expect = 1.9
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 5 NKKEKESPKAGKSGKSSKEGQDTVESEQISVRKNSLVAVPSTVSAKIKVPVSQPIVKKDK 64
+ K KE K GK GK K+G++ + ++ + S K+ P K D
Sbjct: 314 DSKLKEPGKEGKEGKEIKDGKEVKDVKEFKPESSLTTLKAPEKSDKV------PKEKADA 367
Query: 65 RQNSSRFSASNNRELQKLPSLKDVPPADQEKLFIQKLRQC 104
R + S +E K SL P+ + + +Q L C
Sbjct: 368 RDIGKKRSKDGEKEKFKF-SLHGSRPSSEVQYSVQSLSDC 406
>gi|222080092 WD repeat domain 91 [Homo sapiens]
Length = 747
Score = 31.2 bits (69), Expect = 2.5
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 31/137 (22%)
Query: 91 ADQEKLF-----IQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEP 145
AD+EK F + +L+Q ++D + L D W ++R S + E
Sbjct: 34 ADKEKGFRVDKIVDQLQQLMQVYDLAA--LRDY-WSYLERRLFSRL------------ED 78
Query: 146 IYPEVVHMFAVNMFR-----TLPPSSNPTGAEFDPEE-DEPTLEAAWPHLQLVYEFFLRF 199
IY +H ++FR T+ + N EF ++ E +A W F L F
Sbjct: 79 IYRPTIHKLKTSLFRFYLVYTIQTNRNDKAQEFFAKQATELQNQAEWKDW-----FVLPF 133
Query: 200 LESPDFQPNIAKKYIDQ 216
L SPD P A + Q
Sbjct: 134 LPSPDTNPTFATYFSRQ 150
>gi|68348716 AF4/FMR2 family, member 3 isoform 2 [Homo sapiens]
Length = 1251
Score = 31.2 bits (69), Expect = 2.5
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 2 PNKNKKEKESPKAGKSGKSSKE-----GQDTVESEQISVRKNSLVAVPSTVSAKIKVPVS 56
P K E ESP G S S E D E+EQ + ++ +L A+ SA ++ P
Sbjct: 371 PKKGDAEPESPDNGTSNTSMLEDDLKLSSDEEENEQQAAQRTALRALSD--SAVVQQPNC 428
Query: 57 QPIVKKDKRQNSSRFSASNN 76
+ V K +SS S S++
Sbjct: 429 RTSVPSSKGSSSSSSSGSSS 448
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,358,655
Number of Sequences: 37866
Number of extensions: 911537
Number of successful extensions: 4150
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 4045
Number of HSP's gapped (non-prelim): 145
length of query: 540
length of database: 18,247,518
effective HSP length: 107
effective length of query: 433
effective length of database: 14,195,856
effective search space: 6146805648
effective search space used: 6146805648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.