Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757788
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757788 PREDICTED: hypothetical protein [Homo sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757788 PREDICTED: hypothetical protein [Homo sapiens] 407 e-114
gi|239747570 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169162343 PREDICTED: hypothetical protein [Homo sapiens] 34 0.088
gi|113411617 PREDICTED: hypothetical protein [Homo sapiens] 34 0.088
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 34 0.088
gi|5174463 heparan sulfate D-glucosaminyl 3-O-sulfotransferase ... 32 0.25
gi|110347439 zinc finger protein 225 [Homo sapiens] 32 0.43
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 31 0.57
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 31 0.57
gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 30 0.97
gi|74027276 zinc finger protein 226 isoform a [Homo sapiens] 30 1.3
gi|74027274 zinc finger protein 226 isoform a [Homo sapiens] 30 1.3
gi|13775236 scratch [Homo sapiens] 30 1.3
gi|7019591 zinc finger protein 224 [Homo sapiens] 30 1.3
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi... 30 1.7
gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 30 1.7
gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens] 30 1.7
gi|71040090 regulatory factor X, 5 [Homo sapiens] 29 2.2
gi|4557843 regulatory factor X, 5 [Homo sapiens] 29 2.2
gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens] 29 2.2
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 29 2.2
gi|32308169 zinc finger protein 233 [Homo sapiens] 29 2.2
gi|37655169 ring finger protein 135 isoform 2 [Homo sapiens] 29 2.8
gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens] 29 2.8
gi|239755004 PREDICTED: hypothetical protein [Homo sapiens] 29 2.8
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 29 2.8
gi|122937424 one cut homeobox 3 [Homo sapiens] 29 2.8
gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo... 29 2.8
gi|122937217 zinc finger protein 433 [Homo sapiens] 29 2.8
gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo... 29 2.8
>gi|239757788 PREDICTED: hypothetical protein [Homo sapiens]
Length = 191
Score = 407 bits (1046), Expect = e-114
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MIVLKECCSEFQATGLEERRGQVLTLNPCRWTDVWWRHLRVTSDHMLTHAGPKSLIVWRH 60
MIVLKECCSEFQATGLEERRGQVLTLNPCRWTDVWWRHLRVTSDHMLTHAGPKSLIVWRH
Sbjct: 1 MIVLKECCSEFQATGLEERRGQVLTLNPCRWTDVWWRHLRVTSDHMLTHAGPKSLIVWRH 60
Query: 61 FAVETHLDAGRRAGAWLMHQRVSLVSLLPPWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQ 120
FAVETHLDAGRRAGAWLMHQRVSLVSLLPPWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQ
Sbjct: 61 FAVETHLDAGRRAGAWLMHQRVSLVSLLPPWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQ 120
Query: 121 ERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSLASHLHCHGCPGAMPVAVKR 180
ERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSLASHLHCHGCPGAMPVAVKR
Sbjct: 121 ERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSLASHLHCHGCPGAMPVAVKR 180
Query: 181 QTQKGTRYSTK 191
QTQKGTRYSTK
Sbjct: 181 QTQKGTRYSTK 191
>gi|239747570 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 39.3 bits (90), Expect = 0.002
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 107 SGGQLGGQLQSGQQERDCDCAGE-KGGQSSPSRPTQKAAISKRLRQPKLAGQSTS---LA 162
SG +GG+ + G+++R GE KGG S SRP + A LR + G S LA
Sbjct: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLERRPGACLSRQGLA 62
Query: 163 SH---LHCHGCPG 172
+ C GCPG
Sbjct: 63 ERRVAVQCAGCPG 75
>gi|169162343 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 33.9 bits (76), Expect = 0.088
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 107 SGGQLGGQLQSGQQERDCDCAGE-KGGQSSPSRPTQKAAISKRLRQPKLAG 156
SG +GG+ + G+++R GE KGG S SRP + A LR AG
Sbjct: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAG 53
>gi|113411617 PREDICTED: hypothetical protein [Homo sapiens]
Length = 189
Score = 33.9 bits (76), Expect = 0.088
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 107 SGGQLGGQLQSGQQERDCDCAGE-KGGQSSPSRPTQKAAISKRLRQPKLAG 156
SG +GG+ + G+++R GE KGG S SRP + A LR AG
Sbjct: 3 SGAGVGGERRRGEEKRRGKGRGEAKGGPGSSSRPALRLAADSALRLEPAAG 53
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 33.9 bits (76), Expect = 0.088
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 14/72 (19%)
Query: 90 PWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQS-SPSRPTQKAAISKR 148
P GG+GGCG PG GG+LGG Q ++ C +G +S SPS P
Sbjct: 224 PLRGGGAGGCG-GPG--GGGRLGGDSPGSQAQKVIIC--HRGTRSPSPSDPDYGL----- 273
Query: 149 LRQPKLAGQSTS 160
P LAG S S
Sbjct: 274 ---PPLAGHSLS 282
>gi|5174463 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 2
[Homo sapiens]
Length = 367
Score = 32.3 bits (72), Expect = 0.25
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 102 SPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSL 161
+P G GGQ + Q+ R CD +G +PS P+ +A + + P+L+G + S
Sbjct: 52 APRCLRGPSAGGQ-KLLQKSRPCDPSGP-----TPSEPSAPSAPAAAVPAPRLSGSNHSG 105
Query: 162 ASHLHCHGCPGAMPVAVKR 180
+ L P A+ V VK+
Sbjct: 106 SPKLGTKRLPQALIVGVKK 124
>gi|110347439 zinc finger protein 225 [Homo sapiens]
Length = 706
Score = 31.6 bits (70), Expect = 0.43
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 114 QLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSLASHLHCH 168
QLQS ++ CD G+ SS R Q+ + ++L + G+ + +SHL H
Sbjct: 168 QLQSREKSHTCDECGKSFCYSSALRIHQRVHMGEKLYNCDVCGKEFNQSSHLQIH 222
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 31.2 bits (69), Expect = 0.57
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 90 PWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPS-----RPTQKAA 144
P S G LSP SGGQ+ + S QQ G +GGQ P +P A
Sbjct: 760 PQYSSPQPGSALSPRQPSGGQIHTGMGSYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNAL 818
Query: 145 ISKRLRQPKLAGQSTSLASHLHCHGCPGAMP 175
+ +AG + + HG PG P
Sbjct: 819 PNANYPSAGMAGGINPMGAGGQMHGQPGIPP 849
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 31.2 bits (69), Expect = 0.57
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 90 PWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPS-----RPTQKAA 144
P S G LSP SGGQ+ + S QQ G +GGQ P +P A
Sbjct: 760 PQYSSPQPGSALSPRQPSGGQIHTGMGSYQQ-NSMGSYGPQGGQYGPQGGYPRQPNYNAL 818
Query: 145 ISKRLRQPKLAGQSTSLASHLHCHGCPGAMP 175
+ +AG + + HG PG P
Sbjct: 819 PNANYPSAGMAGGINPMGAGGQMHGQPGIPP 849
>gi|4758156 diacylglycerol kinase, iota [Homo sapiens]
Length = 1065
Score = 30.4 bits (67), Expect = 0.97
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 93 SGGSGGCGLSPGLWSG---GQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRL 149
S +G ++P +G G GG SG C C G +GG + AA + L
Sbjct: 45 SAAAGAGAMNPSSSAGEEKGATGGSSSSGSGAGSC-CLGAEGGADPRGAGSAAAAGAAAL 103
Query: 150 RQPKLAGQ 157
+P AGQ
Sbjct: 104 DEPAAAGQ 111
>gi|74027276 zinc finger protein 226 isoform a [Homo sapiens]
Length = 803
Score = 30.0 bits (66), Expect = 1.3
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 78 MHQRVSLVSLLPPWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPS 137
MHQRV P+ G CG S QL + +G++ CD G+ +SS
Sbjct: 688 MHQRVHTGE--KPYKCGE---CGKYFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQL 742
Query: 138 RPTQKAAISKRLRQPKLAGQSTSLASHLHCH 168
+ Q+ ++ + ++ G+S S S+L H
Sbjct: 743 QSHQRVHTGEKPYKCEICGKSFSWRSNLTVH 773
>gi|74027274 zinc finger protein 226 isoform a [Homo sapiens]
Length = 803
Score = 30.0 bits (66), Expect = 1.3
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 78 MHQRVSLVSLLPPWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPS 137
MHQRV P+ G CG S QL + +G++ CD G+ +SS
Sbjct: 688 MHQRVHTGE--KPYKCGE---CGKYFSQASSLQLHQSVHTGEKPYKCDVCGKVFSRSSQL 742
Query: 138 RPTQKAAISKRLRQPKLAGQSTSLASHLHCH 168
+ Q+ ++ + ++ G+S S S+L H
Sbjct: 743 QSHQRVHTGEKPYKCEICGKSFSWRSNLTVH 773
>gi|13775236 scratch [Homo sapiens]
Length = 348
Score = 30.0 bits (66), Expect = 1.3
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 89 PPWDSGGSGGC-GLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISK 147
P D+GG GG G S G GG+ G + +G + R A GG+ + + A S
Sbjct: 145 PDGDAGGGGGAGGRSLGSGPGGRGGTRAGAGTEARAGPGAAGAGGRHACGECGKTYATSS 204
Query: 148 RLRQPKLAGQSTSLASHLHCHGC 170
L + K +S C C
Sbjct: 205 NLSRHKQTHRSLDSQLARRCPTC 227
>gi|7019591 zinc finger protein 224 [Homo sapiens]
Length = 707
Score = 30.0 bits (66), Expect = 1.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 114 QLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSLASHLHCH 168
QL SG++ CD G+ S R Q+ + ++ + + G+ S +SHL H
Sbjct: 168 QLHSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCYKCDVCGKEFSQSSHLQTH 222
>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo
sapiens]
Length = 1343
Score = 29.6 bits (65), Expect = 1.7
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 90 PWDSGGSGGCGLSPGLWSGGQLGGQLQSG 118
P SGGSGG G G SGG GG+ + G
Sbjct: 368 PTGSGGSGGMGSGGGGGSGGGSGGKGKGG 396
>gi|21483182 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 99 CGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQS 158
CG + G S + + ++ CD E GQ S ++ QK S + Q G+
Sbjct: 722 CGKAFGYSSDLIQHYRTHTAEKPYQCDICRENVGQCSHTKQHQKIYSSTKSHQCHECGRG 781
Query: 159 TSLASHLHCH 168
+L SHL+ H
Sbjct: 782 FTLKSHLNQH 791
>gi|11036642 zinc finger with KRAB and SCAN domains 5 [Homo sapiens]
Length = 839
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 99 CGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQS 158
CG + G S + + ++ CD E GQ S ++ QK S + Q G+
Sbjct: 722 CGKAFGYSSDLIQHYRTHTAEKPYQCDICRENVGQCSHTKQHQKIYSSTKSHQCHECGRG 781
Query: 159 TSLASHLHCH 168
+L SHL+ H
Sbjct: 782 FTLKSHLNQH 791
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 29.3 bits (64), Expect = 2.2
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 90 PWDSGGSGGCGLS------PGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKA 143
PW++ GSGG G S PG + G L GQ D KGG+ S+ T++A
Sbjct: 499 PWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQG----DGTVSKGGRGPGSQHTKEA 554
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 29.3 bits (64), Expect = 2.2
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 90 PWDSGGSGGCGLS------PGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKA 143
PW++ GSGG G S PG + G L GQ D KGG+ S+ T++A
Sbjct: 499 PWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQG----DGTVSKGGRGPGSQHTKEA 554
>gi|38505194 prostaglandin E receptor 1, subtype EP1 [Homo sapiens]
Length = 402
Score = 29.3 bits (64), Expect = 2.2
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 77 LMHQRV--SLVSLLPP--WDSGGSGGCGLSPGLWSGGQLGGQLQSG 118
L+ Q V L+ LLPP GG G GL+P W L SG
Sbjct: 353 LLRQAVLRQLLRLLPPRAGAKGGPAGLGLTPSAWEASSLRSSRHSG 398
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 29.3 bits (64), Expect = 2.2
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 13/63 (20%)
Query: 88 LPPWDSGGSGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISK 147
+PP GG GG G S G GG G +G G SS S ++K+ K
Sbjct: 195 VPPGGLGGGGGGGSSSGSSGGGGGSG-------------SGSGGSSSSSSSSSKKSKEQK 241
Query: 148 RLR 150
LR
Sbjct: 242 ALR 244
>gi|32308169 zinc finger protein 233 [Homo sapiens]
Length = 670
Score = 29.3 bits (64), Expect = 2.2
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 45 HMLTHAGPKSL---IVWRHFAVETHLDAGRRAGAWLMHQRVSLVSLLPPWDSGGSGGCGL 101
H H G K + ++F+ +HL A HQRV D+ CG
Sbjct: 470 HQRIHTGEKPYKCDVCDKNFSRNSHLQA---------HQRVHTGEKPYKCDT-----CGK 515
Query: 102 SPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQSTSL 161
S Q ++ +G++ C+ G+ QSS + Q+ + + + G+ S
Sbjct: 516 DFSQISHLQAHQRVHTGEKPYKCETCGKGFSQSSHLQDHQQVHTGENPYKCDVCGKGFSW 575
Query: 162 ASHLHCH 168
+SHL H
Sbjct: 576 SSHLQAH 582
>gi|37655169 ring finger protein 135 isoform 2 [Homo sapiens]
Length = 210
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 114 QLQSGQQERDCDCAGEKGGQSSPSRP-----TQKAAISKRLRQPKLAGQSTSLASHL 165
++Q+G C C G S+ +RP Q+ A+ K + + +A + T L HL
Sbjct: 91 EIQAGSDPAHCPCPGSSSLSSAAARPRRRPELQRVAVEKSITE--VAQELTELVEHL 145
>gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens]
Length = 432
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 114 QLQSGQQERDCDCAGEKGGQSSPSRP-----TQKAAISKRLRQPKLAGQSTSLASHL 165
++Q+G C C G S+ +RP Q+ A+ K + + +A + T L HL
Sbjct: 91 EIQAGSDPAHCPCPGSSSLSSAAARPRRRPELQRVAVEKSITE--VAQELTELVEHL 145
>gi|239755004 PREDICTED: hypothetical protein [Homo sapiens]
Length = 558
Score = 28.9 bits (63), Expect = 2.8
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 21/91 (23%)
Query: 96 SGGCGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLA 155
SGGC L+ GG+ GG AG+ G + P AA+S
Sbjct: 78 SGGCALTRRAACGGRGGGTR-----------AGQGGRGAWGEAPVGSAALSSP------T 120
Query: 156 GQSTSLASHLHCHG----CPGAMPVAVKRQT 182
G S L+S L G C G +P+A +R++
Sbjct: 121 GVSHLLSSQLRGQGALESCGGILPLAAQRRS 151
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 28.9 bits (63), Expect = 2.8
Identities = 37/124 (29%), Positives = 46/124 (37%), Gaps = 19/124 (15%)
Query: 77 LMHQRVSLVSLLPPWD-----SGGSGGCGLSPGLWSGGQLGGQLQSGQQERD---CDCAG 128
L +QR L +L P + SGG GG G GG GG SG C G
Sbjct: 2270 LENQRNFLNALTSPIEYQRNHSGGGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGG 2329
Query: 129 EKG-GQSSPSRPTQ----------KAAISKRLRQPKLAGQSTSLASHLHCHGCPGAMPVA 177
+S PSR Q +A S + K++G ST S P A P A
Sbjct: 2330 APSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLPPPGAAPEAGPSA 2389
Query: 178 VKRQ 181
R+
Sbjct: 2390 PSRR 2393
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 28.9 bits (63), Expect = 2.8
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 84 LVSLLPPWDSGGSGGCGLSPGLWSG-------GQLGGQLQSGQQERDCDCAGEKGGQSSP 136
+ SLL GG GG G + G S G+L G L C+ G GG +
Sbjct: 50 MASLLDGGGGGGGGGAGGAGGAGSAGGGADFRGELAGPLHPA-MGMACEAPG-LGGTYTT 107
Query: 137 SRPTQK----AAISKRLRQ-PKLAGQSTSLASHLHCHGCPGAMP 175
P Q AA++ + Q A + + H H H P A P
Sbjct: 108 LTPLQHLPPLAAVADKFHQHAAAAAVAGAHGGHPHAHPHPAAAP 151
>gi|9955929 acrosomal vesicle protein 1 isoform c precursor [Homo
sapiens]
Length = 210
Score = 28.9 bits (63), Expect = 2.8
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 107 SGGQLGGQLQSGQQERDCDCAGEKGGQSSPS-------RPTQKAAISKRLRQPKLAGQST 159
SG Q +L+SG+Q D +GE G PS +P+ + A ++ ++ ST
Sbjct: 70 SGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS--ST 127
Query: 160 SLASHLHCHGC 170
S + L+C+ C
Sbjct: 128 STGTILNCYTC 138
>gi|122937217 zinc finger protein 433 [Homo sapiens]
Length = 673
Score = 28.9 bits (63), Expect = 2.8
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 99 CGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQS 158
CG + S Q+ G+ +G++ +C G+ G +S + + ++ + K G+S
Sbjct: 539 CGKAFRSASQLQIHGRTHTGEKPYECKQCGKAFGSASHLQMHGRTHTGEKPYECKQCGKS 598
Query: 159 TSLASHLHCHG 169
AS L HG
Sbjct: 599 FGCASRLQMHG 609
Score = 28.1 bits (61), Expect = 4.8
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 99 CGLSPGLWSGGQLGGQLQSGQQERDCDCAGEKGGQSSPSRPTQKAAISKRLRQPKLAGQS 158
CG S S + G+ +G++ +C G+ +S + + ++ + K G++
Sbjct: 511 CGRSFNCSSSFRYHGRTHTGEKPYECKQCGKAFRSASQLQIHGRTHTGEKPYECKQCGKA 570
Query: 159 TSLASHLHCHG 169
ASHL HG
Sbjct: 571 FGSASHLQMHG 581
>gi|4501879 acrosomal vesicle protein 1 isoform a precursor [Homo
sapiens]
Length = 265
Score = 28.9 bits (63), Expect = 2.8
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 9/71 (12%)
Query: 107 SGGQLGGQLQSGQQERDCDCAGEKGGQSSPS-------RPTQKAAISKRLRQPKLAGQST 159
SG Q +L+SG+Q D +GE G PS +P+ + A ++ ++ ST
Sbjct: 125 SGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPIS--ST 182
Query: 160 SLASHLHCHGC 170
S + L+C+ C
Sbjct: 183 STGTILNCYTC 193
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,684,615
Number of Sequences: 37866
Number of extensions: 422200
Number of successful extensions: 1903
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 1841
Number of HSP's gapped (non-prelim): 130
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.