Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757686
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757686 PREDICTED: hypothetical protein [Homo sapiens]
(140 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757686 PREDICTED: hypothetical protein [Homo sapiens] 304 1e-83
gi|239752176 PREDICTED: hypothetical protein [Homo sapiens] 304 1e-83
gi|239746699 PREDICTED: hypothetical protein XP_002343813 [Homo ... 301 1e-82
gi|13273315 homeobox B4 [Homo sapiens] 41 4e-04
gi|169214011 PREDICTED: hypothetical protein [Homo sapiens] 40 6e-04
gi|113428768 PREDICTED: hypothetical protein [Homo sapiens] 40 6e-04
gi|113428351 PREDICTED: hypothetical protein [Homo sapiens] 39 0.001
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 39 0.001
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 39 0.001
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 39 0.002
gi|56549694 enabled homolog isoform a [Homo sapiens] 38 0.003
gi|39930375 enabled homolog isoform b [Homo sapiens] 38 0.003
gi|38045915 pregnancy-associated plasma protein A preproprotein ... 37 0.005
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 37 0.005
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.007
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.007
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 37 0.007
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 37 0.007
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 37 0.007
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 36 0.009
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 36 0.009
gi|33356148 formin-like 1 [Homo sapiens] 36 0.009
gi|52485606 formin-like 2 [Homo sapiens] 36 0.012
gi|157743252 pecanex-like 3 [Homo sapiens] 36 0.012
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 36 0.012
gi|120587019 zinc finger protein 318 [Homo sapiens] 36 0.012
gi|22027541 programmed cell death 7 [Homo sapiens] 36 0.012
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 35 0.015
>gi|239757686 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 304 bits (779), Expect = 1e-83
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER 60
MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER
Sbjct: 1 MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER 60
Query: 61 RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG 120
RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG
Sbjct: 61 RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG 120
Query: 121 PPQAPPQPFQVSNLEAPPPP 140
PPQAPPQPFQVSNLEAPPPP
Sbjct: 121 PPQAPPQPFQVSNLEAPPPP 140
>gi|239752176 PREDICTED: hypothetical protein [Homo sapiens]
Length = 140
Score = 304 bits (779), Expect = 1e-83
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER 60
MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER
Sbjct: 1 MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER 60
Query: 61 RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG 120
RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG
Sbjct: 61 RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG 120
Query: 121 PPQAPPQPFQVSNLEAPPPP 140
PPQAPPQPFQVSNLEAPPPP
Sbjct: 121 PPQAPPQPFQVSNLEAPPPP 140
>gi|239746699 PREDICTED: hypothetical protein XP_002343813 [Homo
sapiens]
Length = 140
Score = 301 bits (771), Expect = 1e-82
Identities = 139/140 (99%), Positives = 139/140 (99%)
Query: 1 MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER 60
MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER
Sbjct: 1 MVQMLLVSCSFCRALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLER 60
Query: 61 RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAG 120
RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRR EREAAAG
Sbjct: 61 RPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRREREAAAG 120
Query: 121 PPQAPPQPFQVSNLEAPPPP 140
PPQAPPQPFQVSNLEAPPPP
Sbjct: 121 PPQAPPQPFQVSNLEAPPPP 140
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 40.8 bits (94), Expect = 4e-04
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 81 RPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPP 139
+P AG+ R + ACR P PPPPP PP PP P APPP
Sbjct: 49 QPEAGFGRRAACTVQRYAACRDPGPPPPP---------PPPPPPPPPPGLSPRAPAPPP 98
>gi|169214011 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 40.0 bits (92), Expect = 6e-04
Identities = 43/137 (31%), Positives = 52/137 (37%), Gaps = 36/137 (26%)
Query: 19 LSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTG-------LERRPRCLRLRPHD 71
LSS+ P +L TVP+ LD LH AL G L P C +
Sbjct: 38 LSSTDPTHLGLPESVASVTVPI--RLDTLSCLLHSALLGAYTFQQALPSCPCCSQAGHSQ 95
Query: 72 PGGAGRPWPRPRAGYSFRF--GWG----------------GRAVGA--------CRVPSP 105
PG RP PR R G+ R GWG GRA G +PSP
Sbjct: 96 PGAVRRP-PRGRGGWEVRHRPGWGRGLHRRGLGRAEQPERGRAGGPGAGPRTPPMTLPSP 154
Query: 106 PPPPLRRGEREAAAGPP 122
P P + G++EA P
Sbjct: 155 PTLPAQDGKKEARGPEP 171
>gi|113428768 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 40.0 bits (92), Expect = 6e-04
Identities = 43/137 (31%), Positives = 52/137 (37%), Gaps = 36/137 (26%)
Query: 19 LSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTG-------LERRPRCLRLRPHD 71
LSS+ P +L TVP+ LD LH AL G L P C +
Sbjct: 38 LSSTDPTHLGLPESVASVTVPI--RLDTLSCLLHSALLGAYTFQQALPSCPCCSQAGHSQ 95
Query: 72 PGGAGRPWPRPRAGYSFRF--GWG----------------GRAVGA--------CRVPSP 105
PG RP PR R G+ R GWG GRA G +PSP
Sbjct: 96 PGAVRRP-PRGRGGWEVRHRPGWGRGLHRRGLGRAEQPERGRAGGPGAGPRTPPMTLPSP 154
Query: 106 PPPPLRRGEREAAAGPP 122
P P + G++EA P
Sbjct: 155 PTLPAQDGKKEARGPEP 171
>gi|113428351 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 38.9 bits (89), Expect = 0.001
Identities = 42/137 (30%), Positives = 52/137 (37%), Gaps = 36/137 (26%)
Query: 19 LSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTG-------LERRPRCLRLRPHD 71
L+S+ P +L TVP+ LD LH AL G L P C +
Sbjct: 38 LNSTDPTHLGLPESVASVTVPI--RLDTLSCLLHSALLGAYTFQQALPSCPCCSQAGHSQ 95
Query: 72 PGGAGRPWPRPRAGYSFRF--GWG----------------GRAVGA--------CRVPSP 105
PG RP PR R G+ R GWG GRA G +PSP
Sbjct: 96 PGAVRRP-PRGRGGWEVRHRPGWGRGLHRRGLGRAEQPERGRAGGPGAGPRTPPMTLPSP 154
Query: 106 PPPPLRRGEREAAAGPP 122
P P + G++EA P
Sbjct: 155 PTLPAQDGKKEARGPEP 171
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 38.9 bits (89), Expect = 0.001
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 96 AVGACRVPS-PPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
+VGA +P+ PPPPPL A PP PP P L PPPP
Sbjct: 448 SVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPP 493
Score = 36.2 bits (82), Expect = 0.009
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSNL--EAPPPP 140
P PPPPPL G PP PP P + APPPP
Sbjct: 422 PPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPP 461
Score = 32.3 bits (72), Expect = 0.13
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 98 GACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
G+ P PPPPP A A P PP P APP P
Sbjct: 432 GSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Score = 32.0 bits (71), Expect = 0.17
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 97 VGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
+GA P+PP PP G E PP PP P L PPPP
Sbjct: 466 LGAMAPPAPPLPPPLPGSCEFL--PPPPPPLP----GLGCPPPP 503
Score = 29.6 bits (65), Expect = 0.84
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 114 EREAAAGPPQAPPQPFQVSNLEAPPPP 140
E++A+ PP PP S+ E PPPP
Sbjct: 415 EQQASTPPPPPPPPLLPGSSAEPPPPP 441
Score = 27.3 bits (59), Expect = 4.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 112 RGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
R + A+ PP PP P + PPPP
Sbjct: 412 RALEQQASTPPPPPPPPLLPGSSAEPPPP 440
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 38.9 bits (89), Expect = 0.001
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 96 AVGACRVPS-PPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
+VGA +P+ PPPPPL A PP PP P L PPPP
Sbjct: 448 SVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEFLPPPPPP 493
Score = 36.2 bits (82), Expect = 0.009
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSNL--EAPPPP 140
P PPPPPL G PP PP P + APPPP
Sbjct: 422 PPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPP 461
Score = 32.3 bits (72), Expect = 0.13
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 98 GACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
G+ P PPPPP A A P PP P APP P
Sbjct: 432 GSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Score = 32.0 bits (71), Expect = 0.17
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 97 VGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
+GA P+PP PP G E PP PP P L PPPP
Sbjct: 466 LGAMAPPAPPLPPPLPGSCEFL--PPPPPPLP----GLGCPPPP 503
Score = 29.6 bits (65), Expect = 0.84
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 114 EREAAAGPPQAPPQPFQVSNLEAPPPP 140
E++A+ PP PP S+ E PPPP
Sbjct: 415 EQQASTPPPPPPPPLLPGSSAEPPPPP 441
Score = 27.3 bits (59), Expect = 4.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 112 RGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
R + A+ PP PP P + PPPP
Sbjct: 412 RALEQQASTPPPPPPPPLLPGSSAEPPPP 440
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 18/73 (24%)
Query: 69 PH--DPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPP 126
PH PG G+P PRP G +P P PPP+ R G P P
Sbjct: 322 PHAGPPGSGGQPPPRPPPG----------------MPHPGPPPMGMPPRGPPFGSPMGHP 365
Query: 127 QPFQVSNLEAPPP 139
P + PPP
Sbjct: 366 GPMPPHGMRGPPP 378
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 37.7 bits (86), Expect = 0.003
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 105 PPPPPLRRGEREAAAG--PPQAPPQPFQVSNLEAPPPP 140
PPPPPL G +A+ PP PP P + + PPPP
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPP 351
Score = 35.4 bits (80), Expect = 0.015
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Query: 105 PPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
PPPPPL + GPP PP P + + PPPP
Sbjct: 337 PPPPPL------PSTGPPPPPPPPPLPNQVPPPPPP 366
Score = 31.6 bits (70), Expect = 0.22
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
P PPPPP + PP PP P + N PPPP
Sbjct: 334 PGPPPPP----PLPSTGPPPPPPPPP--LPNQVPPPPP 365
Score = 28.9 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQP 128
P PPPPP + PP APP P
Sbjct: 348 PPPPPPPPLPNQVPPPPPPPPAPPLP 373
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 37.7 bits (86), Expect = 0.003
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 105 PPPPPLRRGEREAAAG--PPQAPPQPFQVSNLEAPPPP 140
PPPPPL G +A+ PP PP P + + PPPP
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPP 351
Score = 35.4 bits (80), Expect = 0.015
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Query: 105 PPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
PPPPPL + GPP PP P + + PPPP
Sbjct: 337 PPPPPL------PSTGPPPPPPPPPLPNQVPPPPPP 366
Score = 31.6 bits (70), Expect = 0.22
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
P PPPPP + PP PP P + N PPPP
Sbjct: 334 PGPPPPP----PLPSTGPPPPPPPPP--LPNQVPPPPP 365
Score = 28.9 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQP 128
P PPPPP + PP APP P
Sbjct: 348 PPPPPPPPLPNQVPPPPPPPPAPPLP 373
>gi|38045915 pregnancy-associated plasma protein A preproprotein
[Homo sapiens]
Length = 1627
Score = 37.0 bits (84), Expect = 0.005
Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 57 GLERRPRCLRLRPHDPGGAGRPWPRPRAG---YSFRFGWGGRAVGACRVPSPPPPPLRRG 113
GL RPR R P AGRP PRP AG + R G RA SPPPPP G
Sbjct: 20 GLAERPRRARRDPR----AGRP-PRPAAGPATCATRAARGRRA-------SPPPPPPPGG 67
Query: 114 EREAAAGPPQAPPQPFQVSNLEAPPP 139
EA P + + + + E PP
Sbjct: 68 AWEAVRVPRRRQQREARGATEEPSPP 93
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 37.0 bits (84), Expect = 0.005
Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 69 PHDPGGAGRPWPRPRAGYSFRFGWGGRAV-GACRVPSPPPPPLRRGEREAAA------GP 121
P PG AGRP R R+ R G GR G +P PP +A A GP
Sbjct: 115 PSLPGPAGRPSGRSRS----RVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGP 170
Query: 122 PQAPPQPFQVSNLEAPPPP 140
PF + APPPP
Sbjct: 171 RPTEAPPFPAPRVRAPPPP 189
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.007
Identities = 36/116 (31%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Query: 50 QLHKALTGLERRPRCLRLRPHDPG------GAGRPWPRPRAGYSFRF---------GWGG 94
Q+ + LT E R + +RPH+P GAG P P S G
Sbjct: 259 QMSELLTRAEER---VLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGR 315
Query: 95 RAVGACRVPSPPPPPLR--------RGEREAAAGPPQAPPQPFQVSNLEAP--PPP 140
V P PPPPPL R + PP PP P + L+AP PPP
Sbjct: 316 TPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPP 371
Score = 32.7 bits (73), Expect = 0.100
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSN--LEAPPPP 140
P PPPPP +A A PP PP P Q++ L PPP
Sbjct: 351 PVPPPPPPPATALQAPAVPP--PPAPLQIAPGVLHPAPPP 388
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.007
Identities = 36/116 (31%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Query: 50 QLHKALTGLERRPRCLRLRPHDPG------GAGRPWPRPRAGYSFRF---------GWGG 94
Q+ + LT E R + +RPH+P GAG P P S G
Sbjct: 259 QMSELLTRAEER---VLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGR 315
Query: 95 RAVGACRVPSPPPPPLR--------RGEREAAAGPPQAPPQPFQVSNLEAP--PPP 140
V P PPPPPL R + PP PP P + L+AP PPP
Sbjct: 316 TPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPP 371
Score = 32.7 bits (73), Expect = 0.100
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSN--LEAPPPP 140
P PPPPP +A A PP PP P Q++ L PPP
Sbjct: 351 PVPPPPPPPATALQAPAVPP--PPAPLQIAPGVLHPAPPP 388
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.007
Identities = 36/116 (31%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Query: 50 QLHKALTGLERRPRCLRLRPHDPG------GAGRPWPRPRAGYSFRF---------GWGG 94
Q+ + LT E R + +RPH+P GAG P P S G
Sbjct: 259 QMSELLTRAEER---VLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGR 315
Query: 95 RAVGACRVPSPPPPPLR--------RGEREAAAGPPQAPPQPFQVSNLEAP--PPP 140
V P PPPPPL R + PP PP P + L+AP PPP
Sbjct: 316 TPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPP 371
Score = 32.7 bits (73), Expect = 0.100
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSN--LEAPPPP 140
P PPPPP +A A PP PP P Q++ L PPP
Sbjct: 351 PVPPPPPPPATALQAPAVPP--PPAPLQIAPGVLHPAPPP 388
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 36.6 bits (83), Expect = 0.007
Identities = 36/116 (31%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Query: 50 QLHKALTGLERRPRCLRLRPHDPG------GAGRPWPRPRAGYSFRF---------GWGG 94
Q+ + LT E R + +RPH+P GAG P P S G
Sbjct: 259 QMSELLTRAEER---VLVRPHEPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGR 315
Query: 95 RAVGACRVPSPPPPPLR--------RGEREAAAGPPQAPPQPFQVSNLEAP--PPP 140
V P PPPPPL R + PP PP P + L+AP PPP
Sbjct: 316 TPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPP 371
Score = 32.7 bits (73), Expect = 0.100
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSN--LEAPPPP 140
P PPPPP +A A PP PP P Q++ L PPP
Sbjct: 351 PVPPPPPPPATALQAPAVPP--PPAPLQIAPGVLHPAPPP 388
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 36.6 bits (83), Expect = 0.007
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 19/83 (22%)
Query: 57 GLERRPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGERE 116
GL R PR RP DP G R PRPR + P+P LR E
Sbjct: 257 GLARAPRA---RPRDPAGVSRAPPRPRPHPA--------------SPAPGDGALRGAEAT 299
Query: 117 AAAGPPQAPPQPFQVSNLEAPPP 139
A A P+P S++++PPP
Sbjct: 300 APAALGLVQPRP--KSDIDSPPP 320
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 36.6 bits (83), Expect = 0.007
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 19/83 (22%)
Query: 57 GLERRPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGERE 116
GL R PR RP DP G R PRPR + P+P LR E
Sbjct: 257 GLARAPRA---RPRDPAGVSRAPPRPRPHPA--------------SPAPGDGALRGAEAT 299
Query: 117 AAAGPPQAPPQPFQVSNLEAPPP 139
A A P+P S++++PPP
Sbjct: 300 APAALGLVQPRP--KSDIDSPPP 320
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 36.6 bits (83), Expect = 0.007
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 19/83 (22%)
Query: 57 GLERRPRCLRLRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGERE 116
GL R PR RP DP G R PRPR + P+P LR E
Sbjct: 257 GLARAPRA---RPRDPAGVSRAPPRPRPHPA--------------SPAPGDGALRGAEAT 299
Query: 117 AAAGPPQAPPQPFQVSNLEAPPP 139
A A P+P S++++PPP
Sbjct: 300 APAALGLVQPRP--KSDIDSPPP 320
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 36.2 bits (82), Expect = 0.009
Identities = 27/72 (37%), Positives = 28/72 (38%), Gaps = 28/72 (38%)
Query: 69 PHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPPQP 128
P PG G P P P A GR+ P PPPPP A GPP PP P
Sbjct: 359 PPPPGRGGPPPPPPPAT--------GRSG-----PLPPPPP-------GAGGPPMPPPPP 398
Query: 129 FQVSNLEAPPPP 140
PPPP
Sbjct: 399 --------PPPP 402
Score = 35.4 bits (80), Expect = 0.015
Identities = 26/74 (35%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 69 PHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPS--PPPPPLRRGEREAAAGPPQAPP 126
P P G PRP G GR+ VP PPPP RG G P PP
Sbjct: 316 PPPPSRGGNQLPRP----PIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPP 371
Query: 127 QPFQVSNLEAPPPP 140
P + PPPP
Sbjct: 372 PPATGRSGPLPPPP 385
Score = 29.6 bits (65), Expect = 0.84
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 23/60 (38%)
Query: 67 LRPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPP 126
L P PG G P P P P PPPPP G A PP PP
Sbjct: 381 LPPPPPGAGGPPMPPP--------------------PPPPPPPPSSGNGPA---PPPLPP 417
Score = 28.5 bits (62), Expect = 1.9
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 13/47 (27%)
Query: 103 PSPPPPPLRRGEREAAAGP---------PQAPPQPFQVSNLEAPPPP 140
P PPPPP RG + P PP P + APPPP
Sbjct: 312 PLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGI----APPPP 354
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 36.2 bits (82), Expect = 0.009
Identities = 41/125 (32%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 19 LSSSWPRYLQHHPGAGQ-ATVPVVELLDDGHRQLHKALTGLE--RRPRCLRLRPHDPGGA 75
L PR L PG+ + A + + ++ LTG E R+P R GG
Sbjct: 856 LEEPGPRPLPWPPGSDEVAKIQTPPPKKEPPKEETAQLTGPEAGRKPA----RGVGSGGQ 911
Query: 76 GRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLE 135
G P PR + R WG R G+ R PP P G AGP + PP P +V E
Sbjct: 912 GPPPPRRESRTETR--WGPRP-GSSRRGIPPEEP---GAPPRRAGPIKKPPPPTKVE--E 963
Query: 136 APPPP 140
PP P
Sbjct: 964 LPPKP 968
Score = 30.4 bits (67), Expect = 0.49
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 97 VGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPP 138
+GA P PPPP + A PP PP F + PP
Sbjct: 687 LGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPP 728
Score = 28.5 bits (62), Expect = 1.9
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 102 VPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPP 139
VP PP P+ G A PP PP+ L PPP
Sbjct: 677 VPPSPPQPVTLGAVPAPQAPP-PPPKALYPGALGRPPP 713
Score = 26.2 bits (56), Expect = 9.3
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 18/55 (32%)
Query: 103 PSPPPPPLRRG----EREAAAGPPQA--------------PPQPFQVSNLEAPPP 139
P PPPPP A GPP + PP +V+ ++ PPP
Sbjct: 827 PVPPPPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLPWPPGSDEVAKIQTPPP 881
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 36.2 bits (82), Expect = 0.009
Identities = 19/45 (42%), Positives = 21/45 (46%)
Query: 96 AVGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
A GA P PP P L + + PPQAPP P APP P
Sbjct: 537 APGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLP 581
Score = 30.4 bits (67), Expect = 0.49
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
P PPP P G+ PP PP P + PPPP
Sbjct: 572 PEPPPAPPLPGDLPPP--PPPPPPPPGTDGPVPPPPPP 607
Score = 28.9 bits (63), Expect = 1.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQP 128
P PPPPP G PP PP P
Sbjct: 586 PPPPPPPPPPGTDGPVPPPPPPPPPP 611
Score = 28.5 bits (62), Expect = 1.9
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 104 SPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPP--PP 140
SP P E A PP PP P S EAPP PP
Sbjct: 525 SPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPP 563
Score = 28.5 bits (62), Expect = 1.9
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 10/39 (25%)
Query: 102 VPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
+P PPPPP + PP PP PPPP
Sbjct: 584 LPPPPPPPPPPPGTDGPVPPPPPPP----------PPPP 612
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 35.8 bits (81), Expect = 0.012
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 6/38 (15%)
Query: 103 PSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
P PPPPPL E PP APP P APP P
Sbjct: 567 PPPPPPPLPGPAAETVPAPPLAPPLP------SAPPLP 598
Score = 28.9 bits (63), Expect = 1.4
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 84 AGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGP---PQAPPQPFQVSNLEAPPPP 140
AG S G + G P PP PP GP P PP P PPPP
Sbjct: 510 AGNSVGPTMGAASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPP 569
>gi|157743252 pecanex-like 3 [Homo sapiens]
Length = 2034
Score = 35.8 bits (81), Expect = 0.012
Identities = 37/128 (28%), Positives = 47/128 (36%), Gaps = 13/128 (10%)
Query: 14 ALSNSLSSSWPRYLQHHPGAGQATVPVVELLDDGHRQLHKALTGLERRPRCLRLRPHDPG 73
A+++ L +W R H G G A +DD LT L P P +
Sbjct: 1809 AIAHWLLRTWERL---HKGCG-AGCNSGGNVDDSDCSGGGGLTSLSNNPPVAHPTPENTA 1864
Query: 74 GAG-RPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVS 132
G G +P P P G+ R G G PPPL + GPP A P P +
Sbjct: 1865 GNGDQPLP-PGPGWGPRSSLSGSGDGR-------PPPLLQWPPPRLPGPPPASPIPTEGP 1916
Query: 133 NLEAPPPP 140
PP P
Sbjct: 1917 RTSRPPGP 1924
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 35.8 bits (81), Expect = 0.012
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 100 CRVPSPPPPPLRRGEREAAAGPPQAPPQPFQVSNLEAPPPP 140
C+ P P PPP ++ + PPQ PP Q+ ++ PPPP
Sbjct: 1272 CQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQLGSI--PPPP 1310
Score = 26.6 bits (57), Expect = 7.1
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 101 RVPSPPPPPLRRGEREAAAG-PPQAPPQP 128
R+PS PPP R E A A PP PP P
Sbjct: 531 RLPSTEPPPQGRPEFWAPAPLPPVPPPVP 559
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 35.8 bits (81), Expect = 0.012
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 18/80 (22%)
Query: 68 RPHDPGGAGRPWPRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGP------ 121
RP D GG G PR+G S G + G R SPPPPP R A P
Sbjct: 14 RPKDDGGGG-----PRSGRS-----SGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGH 63
Query: 122 --PQAPPQPFQVSNLEAPPP 139
+A P P + + PP
Sbjct: 64 RGRRASPSPPRGRRVSPSPP 83
Score = 26.6 bits (57), Expect = 7.1
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 69 PHDPGGAGRPWP--RPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRGEREAAAGPPQAPP 126
P P G+ P RPR+ R + R SP PP RRG G PP
Sbjct: 42 PPPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPPRARRGSPSPPRGRRLFPP 101
Query: 127 QP 128
P
Sbjct: 102 GP 103
>gi|22027541 programmed cell death 7 [Homo sapiens]
Length = 485
Score = 35.8 bits (81), Expect = 0.012
Identities = 32/92 (34%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 62 PRCLRLRPHDPGGAGRPW--------PRPRAGYSFRFGWGGRAVGACRVPSPPPPPLRRG 113
P L RP GA P+ PR A S G G P PPPPP R
Sbjct: 38 PPPLPQRPGPFPGASAPFLQPPLALQPRASAEASRGGGGAGAFYPVPPPPLPPPPPQCRP 97
Query: 114 EREAAAG-----PPQAPPQPFQVSNLEAPPPP 140
AG PP P P+ EAPPPP
Sbjct: 98 FPGTDAGERPRPPPPGPGPPWSPRWPEAPPPP 129
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 35.4 bits (80), Expect = 0.015
Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 29/97 (29%)
Query: 73 GGAGRPWPRPRAGYSFRFGW--GGRAVG------ACRVPSPPPPPLR------------- 111
G AG+P P + GY + W G+A+G A R PPPPP
Sbjct: 217 GWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPP 276
Query: 112 -RGEREAAAGPPQ-------APPQPFQVSNLEAPPPP 140
+G + PPQ PP P Q + PPPP
Sbjct: 277 PQGFPQGYGAPPQFSFGYGPPPPPPDQFAPPGVPPPP 313
Score = 27.7 bits (60), Expect = 3.2
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 72 PGGAGRPWPRPRAGYS----FRFGWGGRAVGACRVPSP--PPPPLRRGEREAAAGPPQAP 125
PGG P P+ GY F FG+G + P PPPP G A P P
Sbjct: 271 PGGFPPPQGFPQ-GYGAPPQFSFGYGPPPPPPDQFAPPGVPPPPATPG-----AAPLAFP 324
Query: 126 PQPFQVSNLEAPPP 139
P P Q + + PP
Sbjct: 325 PPPSQAAPDMSKPP 338
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.140 0.476
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,997,695
Number of Sequences: 37866
Number of extensions: 637132
Number of successful extensions: 8987
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 565
Number of HSP's that attempted gapping in prelim test: 5364
Number of HSP's gapped (non-prelim): 3139
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.