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Search of human proteins with 239757611
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757611 PREDICTED: hypothetical protein [Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757611 PREDICTED: hypothetical protein [Homo sapiens] 291 9e-80
gi|7661696 hypothetical protein LOC26017 [Homo sapiens] 174 2e-44
gi|157785548 PAS domain containing 1 [Homo sapiens] 37 0.005
gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens] 36 0.009
gi|51093834 hypothetical protein LOC126859 isoform 2 [Homo sapiens] 36 0.009
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 35 0.020
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 35 0.027
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 35 0.027
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 35 0.027
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 35 0.027
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.027
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.027
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 34 0.035
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 34 0.035
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 34 0.035
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 34 0.046
gi|213385278 TNF receptor-associated factor 3 interacting protei... 33 0.060
gi|20070262 TNF receptor-associated factor 3 interacting protein... 33 0.060
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 33 0.060
gi|219842214 protein phosphatase 1, regulatory (inhibitor) subun... 33 0.078
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 33 0.078
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 33 0.078
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 33 0.10
gi|27883882 P18SRP protein [Homo sapiens] 33 0.10
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.13
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 32 0.13
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 32 0.13
gi|88759339 aster-associated protein [Homo sapiens] 32 0.13
gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens] 32 0.13
gi|12083581 phosphoinositide-specific phospholipase C beta 1 iso... 32 0.17
>gi|239757611 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 291 bits (746), Expect = 9e-80
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 METPRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDK 60
METPRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDK
Sbjct: 1 METPRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDK 60
Query: 61 DKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVE 120
DKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVE
Sbjct: 61 DKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVE 120
Query: 121 DFNRHLDTLTEHYIPRVSWTK 141
DFNRHLDTLTEHYIPRVSWTK
Sbjct: 121 DFNRHLDTLTEHYIPRVSWTK 141
>gi|7661696 hypothetical protein LOC26017 [Homo sapiens]
Length = 112
Score = 174 bits (442), Expect = 2e-44
Identities = 92/114 (80%), Positives = 101/114 (88%), Gaps = 3/114 (2%)
Query: 29 VDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTP 88
++AYEQVQKG LKLKGVAEL VTKRKKKKKDKDKAKL E+MG +KKNEEEK+ GLDK TP
Sbjct: 1 MEAYEQVQKGPLKLKGVAELGVTKRKKKKKDKDKAKLLEAMGTSKKNEEEKRRGLDKRTP 60
Query: 89 ARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDFNRHLDTLTEHY-IPRVSWTK 141
A+AAFEKMQEKRQ + +K ASKTHKQRVEDFNRHLDTLTEHY IP+VSWTK
Sbjct: 61 AQAAFEKMQEKRQMERILKK--ASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK 112
>gi|157785548 PAS domain containing 1 [Homo sapiens]
Length = 773
Score = 37.0 bits (84), Expect = 0.005
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 52 KRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSS-RKHP 110
K +K+KK ++K KL E KK +E++ R +K+QE+++W+G +K P
Sbjct: 508 KVQKQKKMQEKKKLQEQKMQEKKKLQEQR---------RQKKKKLQERKKWQGQMLQKEP 558
Query: 111 ASKTHKQRVED 121
+ KQ++++
Sbjct: 559 EEEQQKQQLQE 569
>gi|51093836 hypothetical protein LOC126859 isoform 1 [Homo sapiens]
Length = 1012
Score = 36.2 bits (82), Expect = 0.009
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 17 VASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNE 76
V + + +A DAYE++ L+K K + EL +T RK+ K++K+ E ++ E
Sbjct: 935 VENRARQAEEKFEDAYEKLHHTLIKNKDLEELVMTSRKESKEEKENQDEREVKEEEEQQE 994
Query: 77 EEK 79
EE+
Sbjct: 995 EEE 997
>gi|51093834 hypothetical protein LOC126859 isoform 2 [Homo sapiens]
Length = 938
Score = 36.2 bits (82), Expect = 0.009
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 17 VASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNE 76
V + + +A DAYE++ L+K K + EL +T RK+ K++K+ E ++ E
Sbjct: 861 VENRARQAEEKFEDAYEKLHHTLIKNKDLEELVMTSRKESKEEKENQDEREVKEEEEQQE 920
Query: 77 EEK 79
EE+
Sbjct: 921 EEE 923
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 35.0 bits (79), Expect = 0.020
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 37 KGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLD---KWTPARAAF 93
+G LKL + + + K++ +K K K E G+ K E+E+ G+ K +A
Sbjct: 1060 EGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARI 1119
Query: 94 EKMQEKRQWKGSSRKHPASKTHKQRVEDFNRHLDTLTE 131
E+++E+ + + +SR +K KQR D +R L+ ++E
Sbjct: 1120 EELEEEIEAERASR----AKAEKQR-SDLSRELEEISE 1152
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 34.7 bits (78), Expect = 0.027
Identities = 20/107 (18%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 22 TEAPGSVVDAYEQVQKG----LLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
T PG ++ +Q++K L + + AE+R + ++++K +++ + + + ++ EE
Sbjct: 710 TTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEE 769
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDFNR 124
E++ ++ R E ++ +R+ + + R+ + +Q+ E R
Sbjct: 770 ERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRR 816
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 34.7 bits (78), Expect = 0.027
Identities = 20/107 (18%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 22 TEAPGSVVDAYEQVQKG----LLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
T PG ++ +Q++K L + + AE+R + ++++K +++ + + + ++ EE
Sbjct: 737 TTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEE 796
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDFNR 124
E++ ++ R E ++ +R+ + + R+ + +Q+ E R
Sbjct: 797 ERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRR 843
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 34.7 bits (78), Expect = 0.027
Identities = 20/107 (18%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 22 TEAPGSVVDAYEQVQKG----LLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
T PG ++ +Q++K L + + AE+R + ++++K +++ + + + ++ EE
Sbjct: 716 TTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEE 775
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDFNR 124
E++ ++ R E ++ +R+ + + R+ + +Q+ E R
Sbjct: 776 ERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRR 822
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 34.7 bits (78), Expect = 0.027
Identities = 20/107 (18%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 22 TEAPGSVVDAYEQVQKG----LLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
T PG ++ +Q++K L + + AE+R + ++++K +++ + + + ++ EE
Sbjct: 716 TTTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEE 775
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDFNR 124
E++ ++ R E ++ +R+ + + R+ + +Q+ E R
Sbjct: 776 ERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRR 822
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 34.7 bits (78), Expect = 0.027
Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 4 PRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLL-KLKGVAELRVTKRKKKKKDKDK 62
P + + + +++ V+S + A ++V K K K + + + K K++K KD+
Sbjct: 18 PNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDE 77
Query: 63 AKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDF 122
K+ KK EEEK+ ++ E+ +++ Q K + A++ K++ E
Sbjct: 78 EKVKAEEESKKKEEEEKKKHQEE--------ERKKQEEQAKRQQEEEAAAQM-KEKEESI 128
Query: 123 NRHLDTLTEHYI 134
H + H++
Sbjct: 129 QLHQEAWERHHL 140
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 34.7 bits (78), Expect = 0.027
Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 4 PRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLL-KLKGVAELRVTKRKKKKKDKDK 62
P + + + +++ V+S + A ++V K K K + + + K K++K KD+
Sbjct: 18 PNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDE 77
Query: 63 AKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVEDF 122
K+ KK EEEK+ ++ E+ +++ Q K + A++ K++ E
Sbjct: 78 EKVKAEEESKKKEEEEKKKHQEE--------ERKKQEEQAKRQQEEEAAAQM-KEKEESI 128
Query: 123 NRHLDTLTEHYI 134
H + H++
Sbjct: 129 QLHQEAWERHHL 140
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 34.3 bits (77), Expect = 0.035
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 46 AELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGS 105
AE + +K+KKKKK+K K +KK+++ K+H K EK Q+ + K
Sbjct: 1687 AESQDSKKKKKKKEKKK---------HKKHKKHKKH--KKHAGTEVELEKSQKHKHKKKK 1735
Query: 106 SRKHPASKTHKQR 118
S+K+ + K++
Sbjct: 1736 SKKNKDKEKEKEK 1748
Score = 29.6 bits (65), Expect = 0.86
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 1 METPRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDK 60
+ET R + + +EN P D V+ + + + V+++ K+++DK
Sbjct: 920 LETSRKSREPTGVEENKTDSLFVLPSR--DDATPVRDEPMDAESITFKSVSEKDKRERDK 977
Query: 61 DKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQ 117
KAK ++ N + K+ + K PA+ EK+ +R+ S R P K K+
Sbjct: 978 PKAKGDKTKRKNDGSAVSKKENIVK--PAKGPQEKVDGERE--RSPRSEPPIKKAKE 1030
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 34.3 bits (77), Expect = 0.035
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 46 AELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGS 105
AE + +K+KKKKK+K K +KK+++ K+H K EK Q+ + K
Sbjct: 1721 AESQDSKKKKKKKEKKK---------HKKHKKHKKH--KKHAGTEVELEKSQKHKHKKKK 1769
Query: 106 SRKHPASKTHKQR 118
S+K+ + K++
Sbjct: 1770 SKKNKDKEKEKEK 1782
Score = 29.6 bits (65), Expect = 0.86
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 1 METPRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDK 60
+ET R + + +EN P D V+ + + + V+++ K+++DK
Sbjct: 954 LETSRKSREPTGVEENKTDSLFVLPSR--DDATPVRDEPMDAESITFKSVSEKDKRERDK 1011
Query: 61 DKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQ 117
KAK ++ N + K+ + K PA+ EK+ +R+ S R P K K+
Sbjct: 1012 PKAKGDKTKRKNDGSAVSKKENIVK--PAKGPQEKVDGERE--RSPRSEPPIKKAKE 1064
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 34.3 bits (77), Expect = 0.035
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 8 KGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTK--RKKKKKDKDKAKL 65
KG+ +++N P+ E+ DA K+K VA+ + K R++KK+D++KAKL
Sbjct: 198 KGQKKNQKNKPGPNIESGNEDDDAS-------FKIKTVAQKKAEKKERERKKRDEEKAKL 250
Query: 66 PESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEK 99
K +EE + G + + + K +E+
Sbjct: 251 -----RKLKEKEELETGKKDQSKQKESQRKFEEE 279
Score = 32.7 bits (73), Expect = 0.10
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 23 EAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKA----------KLPESMGMN 72
E P + D E +K K K E + K K+KKK KA KL E
Sbjct: 300 ETPTAAEDDNEGDKKKKDKKKKKGE-KEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQ 358
Query: 73 KKNEEEKQHGLDKWTPARAAFEKM-QEKRQWKGSSRKHPASKTHKQ 117
K+ EEE+ L++ R E++ QEKR+ K K + K+
Sbjct: 359 KREEEERIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKE 404
Score = 29.3 bits (64), Expect = 1.1
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Query: 2 ETPRDCKGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKD 61
E + +G D+E VA TE + ++ +KG K + ++ + K K
Sbjct: 64 ELSLEAQGIKADRETVAVKPTENNEEEFTSKDKKKKGQKGKKQSFDDNDSEELEDKDSKS 123
Query: 62 KAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQR 118
K + M ++++ P +A + + ++W GS SK K+R
Sbjct: 124 KKTAKPKVEMYSGSDDDDDFNK---LPKKAKGKAQKSNKKWDGSEEDEDNSKKIKER 177
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 33.9 bits (76), Expect = 0.046
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 19/127 (14%)
Query: 8 KGESTDKENVASPSTEAPGSVV---DAYEQVQKGLLKLKG----------VAELRVTKRK 54
K E+ DK+ V +P EAP V DA + + + K + AE + +
Sbjct: 894 KEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPE 953
Query: 55 KKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKT 114
KK ++KAK PE + +E L K P++ EK + K SS SK
Sbjct: 954 KKDTKEEKAKKPEEKPKTEAKAKEDDKTLSK-EPSKPKAEKAE-----KSSSTDQKDSKP 1007
Query: 115 HKQRVED 121
++ ED
Sbjct: 1008 PEKATED 1014
Score = 31.6 bits (70), Expect = 0.23
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 8 KGESTDKENVASPS---------TEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKK 58
K +S KE V SP +AP + E+V+ + + + E++V K KK
Sbjct: 784 KAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKV-KEPPKKA 842
Query: 59 DKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQR 118
+++KA P + +K + +K+ K P K++EK++ K + K+
Sbjct: 843 EEEKA--PATPKTEEKKDSKKEEAPKKEAPK----PKVEEKKEPAVEKPKESKVEAKKEE 896
Query: 119 VED 121
ED
Sbjct: 897 AED 899
Score = 30.8 bits (68), Expect = 0.39
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 10 ESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESM 69
E D + +P EAP V+ E+ + + K K E +V +K++ +DK K PE
Sbjct: 855 EKKDSKKEEAPKKEAPKPKVE--EKKEPAVEKPK---ESKVEAKKEEAEDKKKVPTPEKE 909
Query: 70 GMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVE 120
K +E +K A+ + + K K + +K A + + E
Sbjct: 910 APAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEE 960
Score = 26.6 bits (57), Expect = 7.3
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 18/101 (17%)
Query: 8 KGESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPE 67
K +S KE SP +A V + + +K +K A+ T K K K++AK PE
Sbjct: 693 KAKSPVKEEAKSPE-KAKSPVKEEAKSPEKAKSPVKEEAK---TPEKAKSPVKEEAKSPE 748
Query: 68 SMGMNKKNEEEKQHGLDKWTP---------ARAAFEKMQEK 99
K EK LD +P AR+ +K EK
Sbjct: 749 -----KAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEK 784
>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
isoform 2 [Homo sapiens]
Length = 625
Score = 33.5 bits (75), Expect = 0.060
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 53 RKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTP------ARAAFEKMQEKRQWKGSS 106
RK ++KDKDK K E+ G N+ E E++ + P R E+ ++ + K +
Sbjct: 192 RKPREKDKDKEKAKEN-GGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKETE 250
Query: 107 RKHPASKTHKQRVEDFNRHLD 127
RK K K+R+ D +R D
Sbjct: 251 RKSEGGK-EKERLRDRDRERD 270
>gi|20070262 TNF receptor-associated factor 3 interacting protein 1
isoform 1 [Homo sapiens]
Length = 691
Score = 33.5 bits (75), Expect = 0.060
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 53 RKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTP------ARAAFEKMQEKRQWKGSS 106
RK ++KDKDK K E+ G N+ E E++ + P R E+ ++ + K +
Sbjct: 192 RKPREKDKDKEKAKEN-GGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKETE 250
Query: 107 RKHPASKTHKQRVEDFNRHLD 127
RK K K+R+ D +R D
Sbjct: 251 RKSEGGK-EKERLRDRDRERD 270
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 33.5 bits (75), Expect = 0.060
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 12 TDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGM 71
+DK + P APG + K + L+G T + K++ + +G
Sbjct: 31 SDKGDAPPPPPPAPGPGAPGPARAAKPV-PLRGEEGTEATLAEVKEEGE--------LGG 81
Query: 72 NKKNEEEKQHGLDKWTPAR-----AAFEKMQEKRQWKGSSRKHPASKTHKQRVEDFNRHL 126
++ EEE++ GLD+ R KM + R + R+ A+ + R+ D N L
Sbjct: 82 EEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAAL 141
Query: 127 DTL 129
D L
Sbjct: 142 DNL 144
>gi|219842214 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform b [Homo sapiens]
Length = 943
Score = 33.1 bits (74), Expect = 0.078
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 18 ASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
AS P S+V +G+ K E KR+++K+ +DK++ + E+
Sbjct: 706 ASSQLNRPNSLVGITSAYSRGITKEN---EREGEKREEEKEGEDKSQPKSIRERRRPREK 762
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRK 108
+ G+ WT E+ Q+ +GS++K
Sbjct: 763 RRSTGVSFWTQDSDENEQEQQSDTEEGSNKK 793
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 33.1 bits (74), Expect = 0.078
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 18 ASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
AS P S+V +G+ K E KR+++K+ +DK++ + E+
Sbjct: 793 ASSQLNRPNSLVGITSAYSRGITKEN---EREGEKREEEKEGEDKSQPKSIRERRRPREK 849
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRK 108
+ G+ WT E+ Q+ +GS++K
Sbjct: 850 RRSTGVSFWTQDSDENEQEQQSDTEEGSNKK 880
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 33.1 bits (74), Expect = 0.078
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 18 ASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEE 77
AS P S+V +G+ K E KR+++K+ +DK++ + E+
Sbjct: 793 ASSQLNRPNSLVGITSAYSRGITKEN---EREGEKREEEKEGEDKSQPKSIRERRRPREK 849
Query: 78 EKQHGLDKWTPARAAFEKMQEKRQWKGSSRK 108
+ G+ WT E+ Q+ +GS++K
Sbjct: 850 RRSTGVSFWTQDSDENEQEQQSDTEEGSNKK 880
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 32.7 bits (73), Expect = 0.10
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 10 ESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESM 69
ES+ + E + + EQ++ +L +++ V K KKKK+ K+K K +
Sbjct: 445 ESSSDSGSSDSEEERATRLAELQEQLKAVHEQLAALSQAPVNKPKKKKEKKEKEKKKKDK 504
Query: 70 GMNK-----KNEEEK--------QHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHK 116
K K EEEK + K PA+ A RQ K ++ AS +
Sbjct: 505 EKEKEKHKVKAEEEKKAKVAPPAKQAQQKKAPAKKANSTTTAGRQLKKGGKQASASYDSE 564
Query: 117 QRVE 120
+ E
Sbjct: 565 EEEE 568
>gi|27883882 P18SRP protein [Homo sapiens]
Length = 155
Score = 32.7 bits (73), Expect = 0.10
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 33 EQVQKGLLKLKGVAELRVT----KRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTP 88
++ + L KL+ + E R+ K+K+K K+K K K + + EE D
Sbjct: 53 DEENEELNKLQALQEKRINEEEEKKKEKSKEKIKLKKKRKRSYSSSSTEE-----DTSKQ 107
Query: 89 ARAAFEKMQEKRQWKGSSRKHPASKTHKQR 118
+ ++K ++K++ K S+K K K++
Sbjct: 108 KKQKYQKKEKKKEKKSKSKKGKHHKKEKKK 137
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 32.3 bits (72), Expect = 0.13
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 49 RVTKRKKKKKDKDKAKLPESMGMNKKNEEE----------KQHGLDKWTPARAAFEKMQE 98
R KRK+K+K+K+K K + K+ EEE K+ ++ E+ +E
Sbjct: 29 RKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEE 88
Query: 99 KRQWKGSSRKHPASKTHKQRVED 121
+ + +G RK + K+ E+
Sbjct: 89 EEKEEGRRRKKKKKRRRKEEEEE 111
Score = 32.0 bits (71), Expect = 0.17
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 53 RKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPAS 112
+KKKKK K+ + E+ + EEE++ G K EK +EKR+ K +K +
Sbjct: 1 KKKKKKKKETEETEET---EETEEEEEKEGKRK--------EKRKEKRKEKEKKKKTKET 49
Query: 113 KTHKQRVED 121
+ K++ E+
Sbjct: 50 EKRKEKEEE 58
Score = 32.0 bits (71), Expect = 0.17
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 10 ESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESM 69
E T++ E G + ++ +K K K E K K++++ K K K +
Sbjct: 11 EETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKK-- 68
Query: 70 GMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPASKTHKQR 118
KK EEE++ ++ + EK + +R+ K R+ + K++
Sbjct: 69 ---KKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 32.0 bits (71), Expect = 0.17
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 41 KLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKR 100
K K E + +++KKKK++++ + E +K EEEK+ G R +K + ++
Sbjct: 53 KEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEG------RRRKKKKKRRRK 106
Query: 101 QWKGSSRKHPASKTHKQ 117
+ + +K KT K+
Sbjct: 107 EEEEEKKKKRRRKTKKK 123
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 32.3 bits (72), Expect = 0.13
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 37 KGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLD---KWTPARAAF 93
+G LKL + + + K++ +K K K E + K E+E+ G+ K +A
Sbjct: 1062 EGDLKLAQESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARI 1121
Query: 94 EKMQEKRQWKGSSRKHPASKTHKQRVEDFNRHLDTLTE 131
E+++E+ + + +SR +K KQR D +R L+ ++E
Sbjct: 1122 EELEEEIEAERASR----AKAEKQR-SDLSRELEEISE 1154
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 32.3 bits (72), Expect = 0.13
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 37 KGLLKLKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLD---KWTPARAAF 93
+G LKL + + + K++ +K K K E + K E+E+ G+ K +A
Sbjct: 1062 EGDLKLAQESIMDIENEKQQLDEKLKKKEFEISNLQSKIEDEQALGIQLQKKIKELQARI 1121
Query: 94 EKMQEKRQWKGSSRKHPASKTHKQRVEDFNRHLDTLTE 131
E+++E+ + + +SR +K KQR D +R L+ ++E
Sbjct: 1122 EELEEEIEAERASR----AKAEKQR-SDLSRELEEISE 1154
>gi|88759339 aster-associated protein [Homo sapiens]
Length = 647
Score = 32.3 bits (72), Expect = 0.13
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 10 ESTDKENVASPSTEAPGSVVDAYEQVQKGLLKLKGVAELRVTKRKKKKKDKDKAKLPESM 69
E +K+ + G + A+E+ K K + L+ RK+++ ++ K + E
Sbjct: 494 EEKNKKKTEEENAARKGEALQAFEK-----WKEKKMEYLKEKNRKEREYERAKKQKEEET 548
Query: 70 GMNKKNEEEKQHGLDKWTPARAAFEKMQEK----RQWKGSSRKHPASKTHKQRVEDFNRH 125
KK ++ ++KW + AF K +EK + K ++ KQ + ++ +
Sbjct: 549 VAEKK--KDNLTAVEKWNEKKEAFFKQKEKEKINEKRKEELKRAEKKDKDKQAINEYEKW 606
Query: 126 LD 127
L+
Sbjct: 607 LE 608
Score = 26.6 bits (57), Expect = 7.3
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 11/70 (15%)
Query: 49 RVTKRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRK 108
+ K K+ KK K +L E NKK EE+ A E +Q +WK +
Sbjct: 477 KAMKEKEAKKIAAKKRLEEK---NKKKTEEEN--------AARKGEALQAFEKWKEKKME 525
Query: 109 HPASKTHKQR 118
+ K K+R
Sbjct: 526 YLKEKNRKER 535
>gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]
Length = 518
Score = 32.3 bits (72), Expect = 0.13
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 52 KRKKKKKDKDKAKLPESMGMNKKNEEEKQHGLDKWTPARAAFEKMQEKRQWKGSSRKHPA 111
+RK+ +K +D+ L S G+N+ EE ++ +KW FE ++ + S +
Sbjct: 415 QRKEDRKSEDQKALLSSSGLNEYEEENEEEDAEKWN--EMDFEMIETNDTMRHSIIETSR 472
Query: 112 SKTHKQRVEDFNRH 125
S + E +N++
Sbjct: 473 SSLTEPTAEVYNQY 486
>gi|12083581 phosphoinositide-specific phospholipase C beta 1 isoform
a [Homo sapiens]
Length = 1216
Score = 32.0 bits (71), Expect = 0.17
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 28 VVDAYEQVQKGLLK-LKGVAELRVTKRKKKKKDKDKAKLPESMGMNKKN-EEEKQHGLDK 85
+ D E+ Q LK LK + E + KKK K + K+ E+ +K EEEK +
Sbjct: 1042 LTDVAEECQNNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEEEKTEMIRS 1101
Query: 86 WTPARAAFEKMQEKRQWKGSSRKHPASKTHKQRVED 121
+ + K E+ Q K + K +Q++ D
Sbjct: 1102 YIQEVVQYIKRLEEAQSKRQEKLVEKHKEIRQQILD 1137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.124 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,065,847
Number of Sequences: 37866
Number of extensions: 266084
Number of successful extensions: 2117
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 1551
Number of HSP's gapped (non-prelim): 569
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.