Guide to the Human Genome
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Name: FAM32A Sequence: fasta or formatted (112aa) NCBI GI: 7661696
Description:

hypothetical protein LOC26017

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1          8           2
 C cysteine            0.0          0           0
 D aspartate           5.4          6           1
 E glutamate          10.7         12           3
 F phenylalanine       1.8          2           1
 G glycine             4.5          5           1
 H histidine           2.7          3           1
 I isoleucine          1.8          2           1
 K lysine             21.4         24           5
 L leucine             8.0          9           2
 M methionine          3.6          4           1
 N asparagine          1.8          2           1
 P proline             2.7          3           1
 Q glutamine           5.4          6           1
 R arginine            7.1          8           2
 S serine              2.7          3           1
 T threonine           6.2          7           1
 V valine              4.5          5           1
 W tryptophan          0.9          1           1
 Y tyrosine            1.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC26017 
LOC100292699          0.745   PREDICTED: hypothetical protein 
MYH1                  0.085   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH3                  0.075   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH2                  0.070   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.070   myosin, heavy chain 2, skeletal muscle, adult [Homo...
LOC100133599          0.070   PREDICTED: hypothetical protein 
UPF2                  0.070   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.070   UPF2 regulator of nonsense transcripts homolog [Homo...
MAP7D3                0.070   MAP7 domain containing 3 
LOC100294088          0.060   PREDICTED: hypothetical protein, partial 
SEPT11                0.055   septin 11 
MYH4                  0.050   myosin, heavy polypeptide 4, skeletal muscle 
KIAA1407              0.050   hypothetical protein LOC57577 
KDM5A                 0.050   retinoblastoma binding protein 2 isoform 1 
KDM5A                 0.050   retinoblastoma binding protein 2 isoform 2 
BRD3                  0.050   bromodomain containing protein 3 
CASC1                 0.050   cancer susceptibility candidate 1 isoform c 
CASC1                 0.050   cancer susceptibility candidate 1 isoform a 
LOC100133599          0.045   PREDICTED: hypothetical protein 
NEUROD2               0.045   neurogenic differentiation 2 
BAZ1A                 0.045   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.045   bromodomain adjacent to zinc finger domain, 1A isofo...
MAP9                  0.045   aster-associated protein 
CCDC59                0.045   coiled-coil domain containing 59 
MYO6                  0.045   myosin VI 
MAP4K4                0.045   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.045   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.045   mitogen-activated protein kinase kinase kinase kinas...
CHAF1A                0.045   chromatin assembly factor 1, subunit A (p150) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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