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Search of human proteins with 239757595
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]
(612 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757595 PREDICTED: hypothetical protein [Homo sapiens] 1280 0.0
gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo ... 495 e-140
gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo ... 495 e-140
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 41 0.003
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.006
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.006
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.011
gi|190684675 X-ray repair cross complementing protein 1 [Homo sa... 38 0.031
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 38 0.031
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 38 0.031
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 37 0.041
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 37 0.041
gi|168480086 hypothetical protein LOC339453 [Homo sapiens] 37 0.053
gi|187830855 tumor protein p53 isoform b [Homo sapiens] 37 0.069
gi|187830823 tumor protein p53 isoform c [Homo sapiens] 37 0.069
gi|187830777 tumor protein p53 isoform a [Homo sapiens] 37 0.069
gi|120407068 tumor protein p53 isoform a [Homo sapiens] 37 0.069
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 37 0.069
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 36 0.12
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 35 0.20
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 35 0.20
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 35 0.20
gi|11386197 forkhead box E3 [Homo sapiens] 35 0.20
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.26
gi|47132519 Ras association and pleckstrin homology domains 1 is... 35 0.26
gi|239754748 PREDICTED: hypothetical protein [Homo sapiens] 34 0.34
gi|45504380 jumonji domain containing 2B [Homo sapiens] 34 0.34
gi|21359951 RNA binding motif protein 42 [Homo sapiens] 34 0.34
gi|75709198 nephronectin [Homo sapiens] 34 0.34
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 34 0.45
>gi|239757595 PREDICTED: hypothetical protein [Homo sapiens]
Length = 612
Score = 1280 bits (3312), Expect = 0.0
Identities = 612/612 (100%), Positives = 612/612 (100%)
Query: 1 MICQDVALRWRSGPLGKERYRVLGTKGGRRALQEDTGAESQQDAGGSPFSPHGLYFLKGN 60
MICQDVALRWRSGPLGKERYRVLGTKGGRRALQEDTGAESQQDAGGSPFSPHGLYFLKGN
Sbjct: 1 MICQDVALRWRSGPLGKERYRVLGTKGGRRALQEDTGAESQQDAGGSPFSPHGLYFLKGN 60
Query: 61 RTSITCREGASAAVCGPPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLL 120
RTSITCREGASAAVCGPPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLL
Sbjct: 61 RTSITCREGASAAVCGPPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLL 120
Query: 121 FPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCA 180
FPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCA
Sbjct: 121 FPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCA 180
Query: 181 QDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPL 240
QDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPL
Sbjct: 181 QDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPL 240
Query: 241 TVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQMRRQPLGKMGSCH 300
TVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQMRRQPLGKMGSCH
Sbjct: 241 TVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQMRRQPLGKMGSCH 300
Query: 301 GAGQAVTRLERGRRERETGAQGLGGMSVLHARTSAEGSARGGVLAHSVQKQSFTRDSAAP 360
GAGQAVTRLERGRRERETGAQGLGGMSVLHARTSAEGSARGGVLAHSVQKQSFTRDSAAP
Sbjct: 301 GAGQAVTRLERGRRERETGAQGLGGMSVLHARTSAEGSARGGVLAHSVQKQSFTRDSAAP 360
Query: 361 QKKSIALGLLLGVVVRGFLATRGELAGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRV 420
QKKSIALGLLLGVVVRGFLATRGELAGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRV
Sbjct: 361 QKKSIALGLLLGVVVRGFLATRGELAGCEPRQELQLCSREACRWQNPTYRQSCFCSAQRV 420
Query: 421 GPRPLRPYATLAVEPVHCGQAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGR 480
GPRPLRPYATLAVEPVHCGQAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGR
Sbjct: 421 GPRPLRPYATLAVEPVHCGQAQRATVGLQARHGKHCQLKPICALVVKCAVPLWGGCVPGR 480
Query: 481 QGLEASASSGNCKSHCFPTAWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSS 540
QGLEASASSGNCKSHCFPTAWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSS
Sbjct: 481 QGLEASASSGNCKSHCFPTAWGCPASDSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSS 540
Query: 541 RLPGPAFFFCSLLRWGSVVWLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFR 600
RLPGPAFFFCSLLRWGSVVWLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFR
Sbjct: 541 RLPGPAFFFCSLLRWGSVVWLFAPSAGPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFR 600
Query: 601 SWAPPVGDPLGP 612
SWAPPVGDPLGP
Sbjct: 601 SWAPPVGDPLGP 612
>gi|239752097 PREDICTED: hypothetical protein XP_002348110 [Homo
sapiens]
Length = 413
Score = 495 bits (1274), Expect = e-140
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 387 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 446
GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV
Sbjct: 188 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 247
Query: 447 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 506
GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS
Sbjct: 248 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 307
Query: 507 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 566
DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA
Sbjct: 308 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 367
Query: 567 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 612
GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 368 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
Score = 219 bits (559), Expect = 4e-57
Identities = 108/115 (93%), Positives = 110/115 (95%), Gaps = 2/115 (1%)
Query: 174 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 233
QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR
Sbjct: 85 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 144
Query: 234 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQM 288
TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG EP + LQ+
Sbjct: 145 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG--CEPRQELQL 197
>gi|239746602 PREDICTED: hypothetical protein XP_002343796 [Homo
sapiens]
Length = 413
Score = 495 bits (1274), Expect = e-140
Identities = 226/226 (100%), Positives = 226/226 (100%)
Query: 387 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 446
GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV
Sbjct: 188 GCEPRQELQLCSREACRWQNPTYRQSCFCSAQRVGPRPLRPYATLAVEPVHCGQAQRATV 247
Query: 447 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 506
GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS
Sbjct: 248 GLQARHGKHCQLKPICALVVKCAVPLWGGCVPGRQGLEASASSGNCKSHCFPTAWGCPAS 307
Query: 507 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 566
DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA
Sbjct: 308 DSSTPLCSTKFDITLIFFLFFKLAVFWLGRPQSSRLPGPAFFFCSLLRWGSVVWLFAPSA 367
Query: 567 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 612
GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP
Sbjct: 368 GPVGGPSCCNGGQAGVDRPLPLTGTTPSFRFLFRSWAPPVGDPLGP 413
Score = 219 bits (559), Expect = 4e-57
Identities = 108/115 (93%), Positives = 110/115 (95%), Gaps = 2/115 (1%)
Query: 174 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 233
QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR
Sbjct: 85 QWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPAR 144
Query: 234 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQM 288
TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG EP + LQ+
Sbjct: 145 TVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPG--CEPRQELQL 197
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 41.2 bits (95), Expect = 0.003
Identities = 45/172 (26%), Positives = 63/172 (36%), Gaps = 13/172 (7%)
Query: 117 PCLLFPILPGPSPHQPEAGPPILPA-----EPRCGPQAWLPSRLWSIRASDPSFPCCLVG 171
P +++P GPS A P++PA P GP A P+ + A +
Sbjct: 36 PAVVYPAAAGPSAASLCAANPLVPAPAAVRPPVAGPPATAPAVVCPAAAGPSAASLRAAN 95
Query: 172 ALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTP 231
L + A TL A A +A P + A A PS L + A + +P
Sbjct: 96 PLAVAPAAVRRPAATLGAASPAAVA----PAAVCPAAASPSAASLCAASPTAAAPAAASP 151
Query: 232 ARTVCPCPLTVQ-TVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEP 282
A PL V AA A S+ SP PL + + + P A P
Sbjct: 152 A---AAAPLAVNPAAAAPAAACVQSVAESPATPLAIAQPVSSPAAPAPCAVP 200
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 40.0 bits (92), Expect = 0.006
Identities = 60/216 (27%), Positives = 71/216 (32%), Gaps = 41/216 (18%)
Query: 77 PPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPGPSPHQPEAGP 136
PP SPL AT SPQ A L P P PSP P P
Sbjct: 415 PPLSPL-ATPSPQ--------------------APNALAVHLLQAPFSPPPSP--PVQAP 451
Query: 137 PILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCAQDKAQTLPTAPTAPMA 196
PA P P A PS+ A+ P A + A Q P P+
Sbjct: 452 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 511
Query: 197 VPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSL 256
+ PP ALA P L P S G +P+ ++ PL
Sbjct: 512 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP------------- 558
Query: 257 GGSPQEPLTLNLHLLQLSGPGKVAEPERRLQMRRQP 292
PQ P L LLQ+ P A P LQ R+P
Sbjct: 559 --PPQAPPVLAAPLLQVP-PSPPASP--TLQAPRRP 589
Score = 32.7 bits (73), Expect = 1.0
Identities = 67/281 (23%), Positives = 91/281 (32%), Gaps = 53/281 (18%)
Query: 11 RSGPLGKERYRVLGTKGGRRALQEDTGAESQQDAGGSPFSPHGLYFLKGNRTSITCREGA 70
R P + R G + + E + E A P + GL S + +
Sbjct: 191 RPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLS 250
Query: 71 SAAVCGPPT--SPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPGPS 128
S A GP +P Q +G +A R++A P P PS
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPS 310
Query: 129 PHQPEAGPPILPAEPRCG--------------PQAWLPSRLWSI---RASDPSFPCCLVG 171
PP LPA P P P L ++ A+ PS +G
Sbjct: 311 AALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLG 370
Query: 172 ALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTP 231
+ Q LP+ P +P+A P PP ALA+P PL P
Sbjct: 371 S-----PTLQATHSFLPSPPLSPLATP--PPQAPPALALP---PLQAP------------ 408
Query: 232 ARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQ 272
P P ++ AT SPQ P L +HLLQ
Sbjct: 409 -----PSPPASPPLSPLATP-------SPQAPNALAVHLLQ 437
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.0 bits (92), Expect = 0.006
Identities = 60/216 (27%), Positives = 71/216 (32%), Gaps = 41/216 (18%)
Query: 77 PPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPGPSPHQPEAGP 136
PP SPL AT SPQ A L P P PSP P P
Sbjct: 376 PPLSPL-ATPSPQ--------------------APNALAVHLLQAPFSPPPSP--PVQAP 412
Query: 137 PILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCAQDKAQTLPTAPTAPMA 196
PA P P A PS+ A+ P A + A Q P P+
Sbjct: 413 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 472
Query: 197 VPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSL 256
+ PP ALA P L P S G +P+ ++ PL
Sbjct: 473 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP------------- 519
Query: 257 GGSPQEPLTLNLHLLQLSGPGKVAEPERRLQMRRQP 292
PQ P L LLQ+ P A P LQ R+P
Sbjct: 520 --PPQAPPVLAAPLLQVP-PSPPASP--TLQAPRRP 550
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 39.3 bits (90), Expect = 0.011
Identities = 53/184 (28%), Positives = 66/184 (35%), Gaps = 26/184 (14%)
Query: 112 TLWKPPCLLFPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCL-V 170
+L PP + P P P P A PP P P +P S AS P P
Sbjct: 698 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP---SPPASPPMSPSATPP 754
Query: 171 GALQWLLKCAQDKAQTLPTA--PTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWES 228
+ LL + P A P +P+A P PP ALA P L P S G
Sbjct: 755 PRVPPLLAAPPLQVPPSPPASLPMSPLAKP--PPQAPPALATPPLQALPSPPASFPGQAP 812
Query: 229 CTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQM 288
+P+ ++ PL PQ P L LLQ+ P A P LQ
Sbjct: 813 FSPSASLPMSPLATP---------------PPQAPPVLAAPLLQVP-PSPPASP--TLQA 854
Query: 289 RRQP 292
R+P
Sbjct: 855 PRRP 858
Score = 38.1 bits (87), Expect = 0.024
Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 35/170 (20%)
Query: 116 PPCLLFPILPGPSPHQPEAGPPILPAEPRCGPQA-------WLPSRLWSIRASDPSFPCC 168
PP L LP P P PP + P P + +P L S P P
Sbjct: 351 PPSL--QTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLA 408
Query: 169 L-------------VGALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVP 215
L + A L + + Q T+P+ P + P P + A L++P+ P
Sbjct: 409 LSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPP 468
Query: 216 LLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLT 265
L S +PA + PLT+ + A +S SPQ PL+
Sbjct: 469 L---------QTSLSPAVSPLSSPLTIHPLQA----LSSLASHSPQAPLS 505
Score = 33.1 bits (74), Expect = 0.77
Identities = 46/156 (29%), Positives = 53/156 (33%), Gaps = 49/156 (31%)
Query: 117 PCLLFPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWL 176
P L P P P P Q P P P PS SI P P L
Sbjct: 556 PHLETPPCPAPCPLQA-------PPSPLTTPPPETPS---SIATPPPQAPPAL------- 598
Query: 177 LKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVC 236
A Q LP+ P +P+A P PP LA+P PL P
Sbjct: 599 ---ASPPLQGLPSPPLSPLATP--PPQAPPXLALP---PLQAP----------------- 633
Query: 237 PCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQ 272
P P ++ AT SPQ P L +HLLQ
Sbjct: 634 PSPPASPPLSPLATP-------SPQAPNALAVHLLQ 662
Score = 31.2 bits (69), Expect = 2.9
Identities = 60/221 (27%), Positives = 75/221 (33%), Gaps = 42/221 (19%)
Query: 77 PPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPGPSPHQPEAGP 136
PP SPL AT SPQ A L P P PSP P P
Sbjct: 640 PPLSPL-ATPSPQ--------------------APNALAVHLLQAPFSPPPSP--PVQAP 676
Query: 137 PILPAEPRCGPQAWLPSRL--------WSIRASDPSFPCCLVGAL---QWLLKCAQDKAQ 185
PA P P A PS+ + S P+ P A Q A Q
Sbjct: 677 FSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 186 TLPTAPTAPMAVPG--QPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLTVQ 243
P+ P +P P PP + LA P PL P A A+ P +
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAP---PLQVPPSPPASLPMSPLAKPPPQAPPALA 793
Query: 244 TVAAEA--TEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEP 282
T +A + AS G +P P + +L + L+ P A P
Sbjct: 794 TPPLQALPSPPASFPGQAPFSP-SASLPMSPLATPPPQAPP 833
>gi|190684675 X-ray repair cross complementing protein 1 [Homo
sapiens]
Length = 633
Score = 37.7 bits (86), Expect = 0.031
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 40/143 (27%)
Query: 41 QQDAGGSPFSPHGLYFLKGNRTS--------------ITCREGASAAVCGPPTSPLNATS 86
++D + P L+F + N+TS T + ++A+ P + + +TS
Sbjct: 177 EEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTS 236
Query: 87 SPQLFSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPG----PSPHQPEAGPPI---- 138
PQ +GKR +++QE E T KPP L P +P P+P + A P+
Sbjct: 237 KPQESPKGKRKL--DLNQE---EKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARA 291
Query: 139 -------------LPAEPRCGPQ 148
P PR GP+
Sbjct: 292 QGAVTGKPRGEGTEPRRPRAGPE 314
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 37.7 bits (86), Expect = 0.031
Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 10/157 (6%)
Query: 11 RSGPLGKERYRVLGTKGGRRALQEDTGAESQQDAGGSPFSPHGLYFLKGNRTSITCREGA 70
RS L + R LG+ + L T AES + GG P L L N + R G+
Sbjct: 702 RSPRLSQPRSESLGSSSDK-TLPSITEAESGAEPGGGPRPRRPL--LLPNLSPARPR-GS 757
Query: 71 SAAVCGPPTSPLNA-TSSPQL---FSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPG 126
++ G P +A SSP L S G WKPP LL P L
Sbjct: 758 LVSLLGEELPPFSALVSSPSLSPSLSPALAGQGHSASPHGPPRCSAAWKPPQLLIPPLGT 817
Query: 127 PSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDP 163
P P+ P I+ G A PS +S R P
Sbjct: 818 FGP--PDLSPRIVDGIEDSGSTAEAPSFRFSRRPELP 852
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.7 bits (86), Expect = 0.031
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 14/206 (6%)
Query: 70 ASAAVCGPPTSP-LNATSSP--QLFSEGKRAHGDEVDQETRREADTLWKPPCLL---FPI 123
ASA G T+P L+++ +P L +H ++ + P L FP
Sbjct: 1502 ASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPS 1561
Query: 124 LPGPSPHQPEAGPPILPAEPRCG-PQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCAQD 182
P P+P Q P A P A + + +I A P+ P + L A
Sbjct: 1562 APNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPV 1621
Query: 183 KAQTLPTAPT-APMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCPCPLT 241
A + P AP + PG + +A VP+ P+L P + + P + P P +
Sbjct: 1622 LASSQTPVPVMAPSSTPGTS--LASASPVPAPTPVLAPSSTQTMLPA--PVPSPLPSPAS 1677
Query: 242 VQTVAAEATEKASSLGG-SPQEPLTL 266
QT+A A A +LGG SP + L+L
Sbjct: 1678 TQTLAL-APALAPTLGGSSPSQTLSL 1702
Score = 35.4 bits (80), Expect = 0.15
Identities = 50/206 (24%), Positives = 73/206 (35%), Gaps = 30/206 (14%)
Query: 125 PGPSPH---------QPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQW 175
PGP P AGPP++PA GP P ++ + S P L L
Sbjct: 1038 PGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPP-----LQPNSGSLPQVLPSPLGV 1092
Query: 176 LLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPARTV 235
L ++ TL PT P P L+ P LL+P G+ A T
Sbjct: 1093 LSGTSRPPTPTLSLKPTPP------APVRLSPAPPPGSSSLLKPLTVPPGYTFPPAAAT- 1145
Query: 236 CPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQMRRQPLGK 295
T T A AT A + L L+ + G+V + + ++P+
Sbjct: 1146 -----TTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVAN 1200
Query: 296 MGSCHGAGQAVTRLERGRRERETGAQ 321
G + +T +G + TGAQ
Sbjct: 1201 A----GGSKPLTFQIQGNKLTLTGAQ 1222
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 37.4 bits (85), Expect = 0.041
Identities = 49/184 (26%), Positives = 66/184 (35%), Gaps = 45/184 (24%)
Query: 61 RTSITCREGASAAVCGPPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLL 120
+ S+ ++ A+AA C P++ S + +V Q E PP
Sbjct: 380 KPSVEGQQPAAAAAC----EPVDHAQSESIL---------KVSQPRALEQQASTPPPPPP 426
Query: 121 FPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCA 180
P+LPG S P PP P P G +A LP+ + P P +GA+
Sbjct: 427 PPLLPGSSAEPPPPPPP--PPLPSVGAKA-LPT-------APPPPPLPGLGAM------- 469
Query: 181 QDKAQTLPTAPTAPMAVPGQ------PPYILAALAVPSFVPLLRPEQSVAGWESCTPART 234
P AP P +PG PP L L P P L P GW P
Sbjct: 470 ------APPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGM---GWGPPPPPPP 520
Query: 235 VCPC 238
+ PC
Sbjct: 521 LLPC 524
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 37.4 bits (85), Expect = 0.041
Identities = 49/184 (26%), Positives = 66/184 (35%), Gaps = 45/184 (24%)
Query: 61 RTSITCREGASAAVCGPPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLL 120
+ S+ ++ A+AA C P++ S + +V Q E PP
Sbjct: 380 KPSVEGQQPAAAAAC----EPVDHAQSESIL---------KVSQPRALEQQASTPPPPPP 426
Query: 121 FPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCA 180
P+LPG S P PP P P G +A LP+ + P P +GA+
Sbjct: 427 PPLLPGSSAEPPPPPPP--PPLPSVGAKA-LPT-------APPPPPLPGLGAM------- 469
Query: 181 QDKAQTLPTAPTAPMAVPGQ------PPYILAALAVPSFVPLLRPEQSVAGWESCTPART 234
P AP P +PG PP L L P P L P GW P
Sbjct: 470 ------APPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGM---GWGPPPPPPP 520
Query: 235 VCPC 238
+ PC
Sbjct: 521 LLPC 524
>gi|168480086 hypothetical protein LOC339453 [Homo sapiens]
Length = 173
Score = 37.0 bits (84), Expect = 0.053
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Query: 353 FTRDSAAPQKKSIALGLLLGVVVRGFLATRGELAGCEPRQELQLCSREACRWQNPTYRQS 412
F DS Q+ + LGLLLG + FL + C R R R+
Sbjct: 78 FVTDSVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVR-----AWRAGRRYDGSWTWLP 132
Query: 413 CFCSAQRVGPRPLRPYATLAVEPVHCGQ 440
CS + +G RP RP+ A VH Q
Sbjct: 133 KLCSLRELGRRPHRPFEEAAGNMVHVKQ 160
>gi|187830855 tumor protein p53 isoform b [Homo sapiens]
Length = 341
Score = 36.6 bits (83), Expect = 0.069
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 125 PGP--SPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPS 164
PGP +P PEA PP+ PA P A P+ W + +S PS
Sbjct: 58 PGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPS 99
>gi|187830823 tumor protein p53 isoform c [Homo sapiens]
Length = 346
Score = 36.6 bits (83), Expect = 0.069
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 125 PGP--SPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPS 164
PGP +P PEA PP+ PA P A P+ W + +S PS
Sbjct: 58 PGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPS 99
>gi|187830777 tumor protein p53 isoform a [Homo sapiens]
Length = 393
Score = 36.6 bits (83), Expect = 0.069
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 125 PGP--SPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPS 164
PGP +P PEA PP+ PA P A P+ W + +S PS
Sbjct: 58 PGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPS 99
>gi|120407068 tumor protein p53 isoform a [Homo sapiens]
Length = 393
Score = 36.6 bits (83), Expect = 0.069
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 125 PGP--SPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPS 164
PGP +P PEA PP+ PA P A P+ W + +S PS
Sbjct: 58 PGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPS 99
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 36.6 bits (83), Expect = 0.069
Identities = 54/174 (31%), Positives = 65/174 (37%), Gaps = 35/174 (20%)
Query: 118 CLLFPILPGPSPHQPEAGPPILPAEPRCGPQAW-LPSRLWSIRASDPSFPCCLVGALQWL 176
CLL +L PSP P PP+ C QA+ L R S+ S SF + L
Sbjct: 581 CLLLALLLAPSPRCP---PPLA-----CALQAFSLGQREDSLEVS--SF------CSEAL 624
Query: 177 LKCA---QDKAQTL-PTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPA 232
+ CA + L P PT P P PP + P F P P SV S P
Sbjct: 625 VTCAALTHPRVPPLQPMGPTCPTPAPVPPPEAPSPFRAPPFHP-PGPMPSVGSMPSAGPM 683
Query: 233 RTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRL 286
+ P P +A P P T N L LS PG V+ P R L
Sbjct: 684 PSAGPMPSAGPVPSAR-----------PGPPTTAN--HLGLSVPGLVSVPPRLL 724
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 35.8 bits (81), Expect = 0.12
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 10/95 (10%)
Query: 116 PPC-----LLFPILPGPSPHQPEAGPPILPAEPRCGPQAWLPS-RLWSIRASDPSFPCCL 169
PPC P P +P A PP LP C P+A LP+ L + +S + P
Sbjct: 268 PPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLP 327
Query: 170 VGALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYI 204
+ + + AQ LP AP A PG P++
Sbjct: 328 PKSPSFQAPPQKAGAQALP----APPAPPGSQPFL 358
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 35.0 bits (79), Expect = 0.20
Identities = 58/233 (24%), Positives = 77/233 (33%), Gaps = 56/233 (24%)
Query: 107 RREADTLWKPPCLLFPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFP 166
+R + +WKP L+ P S P P LP P R+ PS
Sbjct: 12 KRHSKEVWKPSSLIHP---ARSNQPPSRTCPPLPGPPS--------------RSRSPSSR 54
Query: 167 CCLVGALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGW 226
LK D + LP +P P P P++L A P R S +
Sbjct: 55 ----------LKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAG--PTHRLSASHSRV 102
Query: 227 ESCTP---------------ARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLL 271
S P AR P + + AA A SS P P L
Sbjct: 103 SSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSS--PPPPPPSRARSRSL 160
Query: 272 QLSGPG------KVAEPERRLQMRRQPLGKMGSCHGA----GQAVTRLERGRR 314
+LS PG K +E R + +R LG+ G A + R+ RG R
Sbjct: 161 RLSAPGSRHDAEKASERNRLRRKKRLVLGRGGGGECAHAHEWECARRMRRGCR 213
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 35.0 bits (79), Expect = 0.20
Identities = 58/233 (24%), Positives = 77/233 (33%), Gaps = 56/233 (24%)
Query: 107 RREADTLWKPPCLLFPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFP 166
+R + +WKP L+ P S P P LP P R+ PS
Sbjct: 12 KRHSKEVWKPSSLIHP---ARSNQPPSRTCPPLPGPPS--------------RSRSPSSR 54
Query: 167 CCLVGALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGW 226
LK D + LP +P P P P++L A P R S +
Sbjct: 55 ----------LKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAG--PTHRLSASHSRV 102
Query: 227 ESCTP---------------ARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLL 271
S P AR P + + AA A SS P P L
Sbjct: 103 SSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSS--PPPPPPSRARSRSL 160
Query: 272 QLSGPG------KVAEPERRLQMRRQPLGKMGSCHGA----GQAVTRLERGRR 314
+LS PG K +E R + +R LG+ G A + R+ RG R
Sbjct: 161 RLSAPGSRHDAEKASERNRLRRKKRLVLGRGGGGECAHAHEWECARRMRRGCR 213
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 35.0 bits (79), Expect = 0.20
Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 122 PILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCAQ 181
P+ GP P P A+P PQ P + ++ P P L A Q + AQ
Sbjct: 716 PMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQ-VGAPAQ 774
Query: 182 DKAQTLPTAPTAPMA-VPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTPA------RT 234
K +P AP P+A VP Q P I P++ P +AG + PA T
Sbjct: 775 LKPLQMPQAPLQPLAQVPPQMPPI----------PVVPPITPLAGIDGLPPALPDLPTAT 824
Query: 235 VCPCP 239
V P P
Sbjct: 825 VPPVP 829
Score = 35.0 bits (79), Expect = 0.20
Identities = 46/160 (28%), Positives = 60/160 (37%), Gaps = 28/160 (17%)
Query: 122 PILPGPS--PHQPEAGP-PILPAEPRCGPQAWLPSRLWSIRASDP--SFPCCLVGALQWL 176
P+LP P QP P P+LP +P PQ LP R ++ P + P G+ Q L
Sbjct: 966 PVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAATPGS-QIL 1024
Query: 177 L----KCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPE-QSVAGWESCTP 231
L A D A +PT P P AV P + A P +P +V+ P
Sbjct: 1025 LGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVP 1084
Query: 232 ART-----------------VCPCPLTVQTVAAEATEKAS 254
+T PCP TV E+AS
Sbjct: 1085 TQTATLLPPANPPLPGGPGIASPCPTVQLTVEPVQEEQAS 1124
Score = 34.7 bits (78), Expect = 0.26
Identities = 50/172 (29%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 119 LLFPILPGPSPHQPEAGPPI-LPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLL 177
++ P+ P+P PE+ PP+ L + P P+A S + + S P L A Q LL
Sbjct: 1314 IICPVAEHPAPEAPESSPPLPLSSLP---PEASQDSAPYKDQLSSKEQPSFL--ASQQLL 1368
Query: 178 KCAQDKAQTLPTAPTAPMAVPGQPPYILAAL----AVPSFVPLLRPEQSVAG-------- 225
+Q P AP AP+A P PP + AL A P+ + P A
Sbjct: 1369 --SQAGPSNPPGAPPAPLA-PSSPP--VTALPQDGAAPATSTMPEPASGTASQAGGPGTP 1423
Query: 226 ------WESCTPARTVCPCPLTVQTV------AAEATEKASSLGGS-PQEPL 264
E+ P PL VQ + A E AS+ S P+EPL
Sbjct: 1424 QGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPL 1475
Score = 32.3 bits (72), Expect = 1.3
Identities = 38/174 (21%), Positives = 57/174 (32%), Gaps = 11/174 (6%)
Query: 116 PPCLLFPILPGPSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQW 175
PP L + P P P+ + P A +P ++ I P P + L
Sbjct: 756 PPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLP- 814
Query: 176 LLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESC-TPART 234
LP PTA + P Y A+ +PS L P ++ P
Sbjct: 815 ---------PALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPP 865
Query: 235 VCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEPERRLQM 288
P + +T+ A L +P L++H PG+ P QM
Sbjct: 866 GAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQM 919
>gi|11386197 forkhead box E3 [Homo sapiens]
Length = 319
Score = 35.0 bits (79), Expect = 0.20
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 122 PILPGP-SPHQPEAGPPILPAEPRCGPQAWLPSRLWSI---------------------- 158
P LP P +P+ P GP +L P GP P+RL+S+
Sbjct: 182 PPLPFPYAPYAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLGAPEPPCCA 241
Query: 159 --RASDPSFPCCLVGALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPS 212
A+ +FP C A L D+ LP P +P +P L ALA P+
Sbjct: 242 APDAAAAAFPPCAAAASPPLYSQVPDRL-VLPATRPGPGPLPAEP---LLALAGPA 293
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 34.7 bits (78), Expect = 0.26
Identities = 42/165 (25%), Positives = 59/165 (35%), Gaps = 8/165 (4%)
Query: 122 PILPG-PSPHQPEAGPPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCA 180
P L G PSP P P +L P PS + S+ + PS P + L +
Sbjct: 239 PSLSGVPSP--PSDVPSLLSGVPSPPSDISPPSDVPSLLSDVPSLPSDVPSLLSGVPSPP 296
Query: 181 QDKAQTLPTAPTAPMAVPGQP---PYILAALAVPSFVPLLRPEQSVAGWESCTPARTVCP 237
D L P+ P VP P P + + PS VP P V S P + P
Sbjct: 297 SDVPSLLSDVPSPPSDVPSPPSDIPLLSGVPSPPSDVP--SPPSDVPSPPSDVPLLSGVP 354
Query: 238 CPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLSGPGKVAEP 282
PL+ + + S + P L + L P ++ P
Sbjct: 355 SPLSDVPLLSGVPSPPSDVPSLLMSPHRLLMSHYSLVSPHRLDVP 399
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 34.7 bits (78), Expect = 0.26
Identities = 51/192 (26%), Positives = 71/192 (36%), Gaps = 31/192 (16%)
Query: 116 PPCLLFPILPG----PSPHQPEAG--PPILP------AEPRCGPQAWLPSRLWSIRASDP 163
PP P P PSP P PP LP A+P P + +PS + I + P
Sbjct: 811 PPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFP 870
Query: 164 SFPCCLVGALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPS--FVPLLRPEQ 221
P Q L K AP +P AV +P + +++ VPS F P P +
Sbjct: 871 PPPTPPAMESQPL------KPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPP--PPPE 922
Query: 222 SVAGWESCTPARTVCPCPLTVQTVA---------AEATEKASSLGGSPQEPLTLNLHLLQ 272
S + P+ P P T + + T K SS GG P ++
Sbjct: 923 SSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIK 982
Query: 273 LSGPGKVAEPER 284
S + EP+R
Sbjct: 983 SSSGAEHPEPKR 994
>gi|239754748 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 34.3 bits (77), Expect = 0.34
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 20/109 (18%)
Query: 215 PLLRPEQSVAGWESCTPARTVCPCPLTVQTVAAEATEKASSLGGSPQEPLTLNLHLLQLS 274
P RPE + G CTPA P E +LG P+ P T
Sbjct: 71 PGARPEVLLVGARRCTPACKPLRLP-----------ELLPTLGTQPRSPST--------- 110
Query: 275 GPGKVAEPERRLQMRRQPLGKMGSCHGAGQAVTRLERGRRERETGAQGL 323
GP +V RRL + G H A A R + R ++ A+GL
Sbjct: 111 GPDRVPRSSRRLPPESRRPGGPAKTHPARSACCRPRKSGRWPQSTARGL 159
>gi|45504380 jumonji domain containing 2B [Homo sapiens]
Length = 1096
Score = 34.3 bits (77), Expect = 0.34
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 14/110 (12%)
Query: 69 GASAAVCGPPTSPLNATSSPQLFSEGKRAHGDEVD-----QETRREADTLWKPPCLLFPI 123
G+ GP P PQ G+ A G E D + T+ +++ K LL P
Sbjct: 406 GSVKEEAGPEVDPEEEEEEPQPLPHGREAEGAEEDGRGKLRPTKAKSERKKKSFGLLPPQ 465
Query: 124 LPGPSPHQPE---------AGPPILPAEPRCGPQAWLPSRLWSIRASDPS 164
LP P H P PP+L P ++ LP+ L + PS
Sbjct: 466 LPPPPAHFPSEEALWLPSPLEPPVLGPGPAAMEESPLPAPLNVVPPEVPS 515
>gi|21359951 RNA binding motif protein 42 [Homo sapiens]
Length = 480
Score = 34.3 bits (77), Expect = 0.34
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 126 GPSPHQPEAGPPILPAEPRCGPQAWLP-----SRLWSIRASDPSFPCCLVGALQWLLKCA 180
GP+P P AG P++P GP A +P RL + A F ++GA + A
Sbjct: 5 GPAPGLPGAGGPVVP-----GPGAGIPGKSGEERLKEMEAEMALFEQEVLGAPVPGIPTA 59
Query: 181 QDKAQTLPTAPTA-PMAVPGQP 201
T+PT PT M VP P
Sbjct: 60 VPAVPTVPTVPTVEAMQVPAAP 81
>gi|75709198 nephronectin [Homo sapiens]
Length = 565
Score = 34.3 bits (77), Expect = 0.34
Identities = 37/152 (24%), Positives = 53/152 (34%), Gaps = 19/152 (12%)
Query: 118 CLLFP---ILPGPSPHQPEAGPPILPAEPRCGPQAWLP---SRLWSIRASDPSFPCCLVG 171
C+ P I P H P+ IL + G W+P S W + P P +
Sbjct: 253 CVYIPKVMIEPSGPIHVPKGNGTILKGDT--GNNNWIPDVGSTWWPPKT--PYIPPIITN 308
Query: 172 ALQWLLKCAQDKAQTLPTAPTAPMAVPGQPPYILAALAVPSFVPLLRPEQSVAGWESCTP 231
K T PT P+ P PP + L P +P PE+ G + P
Sbjct: 309 R-------PTSKPTTRPTPKPTPIPTPPPPPPLPTELRTP--LPPTTPERPTTGLTTIAP 359
Query: 232 ARTVCPCPLTVQTVAAEATEKASSLGGSPQEP 263
A + P +TV +K P++P
Sbjct: 360 AASTPPGGITVDNRVQTDPQKPRGDVFIPRQP 391
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 33.9 bits (76), Expect = 0.45
Identities = 40/140 (28%), Positives = 46/140 (32%), Gaps = 24/140 (17%)
Query: 76 GPPTSPLNATSSPQLFSEGKRAHGDEVDQETRREADTLWKPPCLLFPILPGPSPHQPEAG 135
GPP P P + G GD +PP L P+ PGP P P G
Sbjct: 248 GPPGPPPPGQVLPPPLA-GPPNRGDRPPPPVLFPGQPFGQPP--LGPLPPGPPPPVPGYG 304
Query: 136 PPILPAEPRCGPQAWLPSRLWSIRASDPSFPCCLVGALQWLLKCAQDKAQTLPTAPTAPM 195
PP P P+ GP P + R P P TL P P
Sbjct: 305 PPPGPPPPQQGPPP--PPGPFPPRPPGPLGP-----------------PLTLAPPPHLPG 345
Query: 196 AVPGQPPYILAALAVPSFVP 215
PG PP A P+F P
Sbjct: 346 PPPGAPP--PAPHVNPAFFP 363
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,068,998
Number of Sequences: 37866
Number of extensions: 1711109
Number of successful extensions: 6834
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 6569
Number of HSP's gapped (non-prelim): 358
length of query: 612
length of database: 18,247,518
effective HSP length: 108
effective length of query: 504
effective length of database: 14,157,990
effective search space: 7135626960
effective search space used: 7135626960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.