Guide to the Human Genome
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Search of human proteins with 239757459

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo
sapiens]
         (122 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     259   3e-70
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ...   259   3e-70
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ...   259   3e-70
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ...   209   5e-55
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ...   207   1e-54
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ...   204   1e-53
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     200   2e-52
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     198   9e-52
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     178   1e-45
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ...   178   1e-45
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ...   178   1e-45
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     178   1e-45
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     174   1e-44
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     174   1e-44
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     174   1e-44
gi|169184221 PREDICTED: family with sequence similarity 27, memb...   173   3e-44
gi|239752497 PREDICTED: similar to family with sequence similari...   172   7e-44
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]     170   2e-43
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]     150   2e-37
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ...    45   1e-05
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]            40   6e-04
gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]            33   0.053
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti...    33   0.053
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    32   0.15 
gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]           32   0.15 
gi|11225260 DNA topoisomerase I [Homo sapiens]                         31   0.20 
gi|7706635 cornulin [Homo sapiens]                                     30   0.45 
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    30   0.58 
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap...    29   0.76 
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap...    29   0.76 

>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 122

 Score =  259 bits (663), Expect = 3e-70
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW
Sbjct: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
           FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG
Sbjct: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120

Query: 121 NP 122
           NP
Sbjct: 121 NP 122


>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
           sapiens]
          Length = 122

 Score =  259 bits (663), Expect = 3e-70
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW
Sbjct: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
           FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG
Sbjct: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120

Query: 121 NP 122
           NP
Sbjct: 121 NP 122


>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
           sapiens]
          Length = 122

 Score =  259 bits (663), Expect = 3e-70
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW
Sbjct: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
           FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG
Sbjct: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120

Query: 121 NP 122
           NP
Sbjct: 121 NP 122


>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
           sapiens]
          Length = 124

 Score =  209 bits (531), Expect = 5e-55
 Identities = 101/124 (81%), Positives = 109/124 (87%), Gaps = 2/124 (1%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1   MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQ--TKGHTAEALKHTP 118
            TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTHT+  T+ HT EALKHTP
Sbjct: 61  HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHTETHTQRHTEEALKHTP 120

Query: 119 PGNP 122
           PGNP
Sbjct: 121 PGNP 124


>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
           sapiens]
          Length = 125

 Score =  207 bits (528), Expect = 1e-54
 Identities = 101/125 (80%), Positives = 108/125 (86%), Gaps = 3/125 (2%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1   MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH---TQTKGHTAEALKHT 117
            TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERRENGRHTH   T T+ HT EALKHT
Sbjct: 61  HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHTTHTQRHTEEALKHT 120

Query: 118 PPGNP 122
           PPGNP
Sbjct: 121 PPGNP 125


>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
           sapiens]
          Length = 122

 Score =  204 bits (520), Expect = 1e-53
 Identities = 98/122 (80%), Positives = 105/122 (86%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG H AKADP+ +KRLTTGLMTQAETQKE QQRQAAM++TALW
Sbjct: 1   MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKHTPPG 120
            TGH+QPKTH HTG HTQTHRE ERNTQRLRDRERREN  HT T T+ HT EALKHTPPG
Sbjct: 61  HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTETHTQRHTEEALKHTPPG 120

Query: 121 NP 122
           NP
Sbjct: 121 NP 122


>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 126

 Score =  200 bits (509), Expect = 2e-52
 Identities = 99/126 (78%), Positives = 105/126 (83%), Gaps = 4/126 (3%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL++RRI SRGPGF A KADP  RKRLT GLMTQ ETQKE  QRQAAM++TALW
Sbjct: 1   MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR----HTHTQTKGHTAEALKH 116
            TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRENGR    HTHT T+ HTAEALKH
Sbjct: 61  RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120

Query: 117 TPPGNP 122
           TPPGNP
Sbjct: 121 TPPGNP 126


>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 126

 Score =  198 bits (503), Expect = 9e-52
 Identities = 98/126 (77%), Positives = 104/126 (82%), Gaps = 4/126 (3%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL++RRI SRGPGF A KADP  RKRLT GLMTQ ETQKE  QRQAAM++TALW
Sbjct: 1   MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH----TQTKGHTAEALKH 116
            TGHI+PKTH HTG HTQTHRE ERNTQRLRDRERRE GRHTH    T T+ HTAEALKH
Sbjct: 61  RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120

Query: 117 TPPGNP 122
           TPPGNP
Sbjct: 121 TPPGNP 126


>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 131

 Score =  178 bits (451), Expect = 1e-45
 Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG HA KADP  RK+LTTGLMTQAETQKE  QRQAAM ET LW
Sbjct: 1   MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
            TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T  HT     KHT
Sbjct: 61  CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118


>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
           sapiens]
          Length = 131

 Score =  178 bits (451), Expect = 1e-45
 Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG HA KADP  RK+LTTGLMTQAETQKE  QRQAAM ET LW
Sbjct: 1   MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
            TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T  HT     KHT
Sbjct: 61  CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118


>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
           sapiens]
          Length = 174

 Score =  178 bits (451), Expect = 1e-45
 Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG HA KADP  RK+LTTGLMTQAETQKE  QRQAAM ET LW
Sbjct: 1   MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
            TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T  HT     KHT
Sbjct: 61  CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118


>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 174

 Score =  178 bits (451), Expect = 1e-45
 Identities = 90/118 (76%), Positives = 94/118 (79%), Gaps = 1/118 (0%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DRRI SRGPG HA KADP  RK+LTTGLMTQAETQKE  QRQAAM ET LW
Sbjct: 1   MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT-AEALKHT 117
            TGHI+PKTH H GTH QTHR+ ERNTQRLRDRERRENGRHTHT T  HT     KHT
Sbjct: 61  CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHTHKHT 118


>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score =  174 bits (442), Expect = 1e-44
 Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG   QLL+DRR+ SRGPG H  K +PR RK LT G  TQAETQK   QRQAAM+E AL 
Sbjct: 1   MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
            TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH    T+T T+ HTA A KH
Sbjct: 61  CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120

Query: 117 TPPGNP 122
           TPPGNP
Sbjct: 121 TPPGNP 126


>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score =  174 bits (442), Expect = 1e-44
 Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG   QLL+DRR+ SRGPG H  K +PR RK LT G  TQAETQK   QRQAAM+E AL 
Sbjct: 1   MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
            TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH    T+T T+ HTA A KH
Sbjct: 61  CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120

Query: 117 TPPGNP 122
           TPPGNP
Sbjct: 121 TPPGNP 126


>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 126

 Score =  174 bits (442), Expect = 1e-44
 Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG   QLL+DRR+ SRGPG H  K +PR RK LT G  TQAETQK   QRQAAM+E AL 
Sbjct: 1   MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
            TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH    T+T T+ HTA A KH
Sbjct: 61  CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120

Query: 117 TPPGNP 122
           TPPGNP
Sbjct: 121 TPPGNP 126


>gi|169184221 PREDICTED: family with sequence similarity 27, member
           E3 [Homo sapiens]
          Length = 113

 Score =  173 bits (439), Expect = 3e-44
 Identities = 84/109 (77%), Positives = 90/109 (82%)

Query: 6   QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65
           QLL+DRRI SRGPG H  KA+PR RK LTTGLMTQAE QK+  QRQAAM+ETALW TGHI
Sbjct: 5   QLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64

Query: 66  QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114
           +P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T  HT   L
Sbjct: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113


>gi|239752497 PREDICTED: similar to family with sequence similarity
           27, member D1, partial [Homo sapiens]
          Length = 122

 Score =  172 bits (435), Expect = 7e-44
 Identities = 88/122 (72%), Positives = 95/122 (77%), Gaps = 6/122 (4%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+++RI SRGPGFH  KAD   RKRLT GLMTQAE +KE  QRQAAM++TALW
Sbjct: 1   MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTH------TQTKGHTAEAL 114
            TGHI PKTH HTG HTQTHRE ERNTQRLRDRERRE  RHTH      T T+ HTAEAL
Sbjct: 61  RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120

Query: 115 KH 116
           KH
Sbjct: 121 KH 122


>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
          Length = 113

 Score =  170 bits (431), Expect = 2e-43
 Identities = 83/109 (76%), Positives = 89/109 (81%)

Query: 6   QLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHI 65
           QLL+DRRI SRGPG H  KA+ R RK LTTGLMTQAE QK+  QRQAAM+ETALW TGHI
Sbjct: 5   QLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTGHI 64

Query: 66  QPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114
           +P+TH HTGTHTQT RE ERNTQRLRDRERRENGRHTHT T  HT   L
Sbjct: 65  RPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHTHRVL 113


>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
          Length = 134

 Score =  150 bits (379), Expect = 2e-37
 Identities = 83/140 (59%), Positives = 91/140 (65%), Gaps = 24/140 (17%)

Query: 1   MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
           MG R QLL+DR I S GPG H  KA PR R+RLTTG  TQAETQKE  QRQA M+E ALW
Sbjct: 1   MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60

Query: 61  FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHT---------- 110
            TG I+P+      T+ QT RE ERNTQR RD+ER+ENGRHTHT T  HT          
Sbjct: 61  RTGRIRPE------TYMQTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114

Query: 111 --------AEALKHTPPGNP 122
                   AEALKHTPPGNP
Sbjct: 115 QTHTQDHRAEALKHTPPGNP 134


>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
           sapiens]
          Length = 228

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 42/117 (35%), Positives = 52/117 (44%), Gaps = 35/117 (29%)

Query: 24  KADPRGRKRLTTGLMTQAETQKEVQQRQA-AMQETALWFTGHIQPKTHKHTGTHTQTHRE 82
           K +P G KRL TG  TQAET+ E  Q++    +  A    G   P+      THTQT R+
Sbjct: 12  KPEPPG-KRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR-----THTQTDRD 65

Query: 83  WERNTQRLRDRERRENGR---------------------HTHTQTKGHTAEALKHTP 118
            +R   R ++RE RE  R                     HTHTQT  HT     HTP
Sbjct: 66  RKRG--RRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTHRHT-----HTP 115


>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 135

 Score = 39.7 bits (91), Expect = 6e-04
 Identities = 17/27 (62%), Positives = 20/27 (74%)

Query: 69  THKHTGTHTQTHREWERNTQRLRDRER 95
           TH HT THT+  RE ER T+R R+RER
Sbjct: 74  THTHTHTHTENERESERETERERERER 100


>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 136

 Score = 33.1 bits (74), Expect = 0.053
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 69  THKHTGTHTQTHRE-WERNTQRLRDRER 95
           TH HT THT+  RE  ER  +R R+RER
Sbjct: 74  THTHTHTHTENERESGERQRERERERER 101



 Score = 29.3 bits (64), Expect = 0.76
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 73  TGTHTQTHREWERNT---QRLRDRERRENGRHTHTQTKGHTAEALKHTPPGNP 122
           T THT TH E ER +   QR R+RER  +        +     +L+   PG P
Sbjct: 74  THTHTHTHTENERESGERQRERERERERDWLKELCSLRIPKIYSLEAEDPGKP 126


>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
           [Homo sapiens]
          Length = 213

 Score = 33.1 bits (74), Expect = 0.053
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 40  QAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRER---R 96
           + E Q+E ++ +   +ET        + +T +HT T  +  ++ ER  +R+RDRER   +
Sbjct: 71  EGERQRERERDRDRQRETER--ERDKERETDRHTETDRERQKQKEREMERVRDREREKQK 128

Query: 97  ENGRHTHT 104
           E GR   T
Sbjct: 129 EMGRERQT 136



 Score = 32.0 bits (71), Expect = 0.12
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 40  QAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQT---HREWERNTQRLRDRERR 96
           + E QKE+ + +   +ET        Q +  + TG   +T   HRE ER  +R R+R+R 
Sbjct: 123 EREKQKEMGRERQTDRETDR--ERERQAERERETGRERKTEDRHRERERERKRERERKRE 180

Query: 97  ENGRHTHT 104
              R  HT
Sbjct: 181 TKERERHT 188



 Score = 27.3 bits (59), Expect = 2.9
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 71  KHTGTHTQT---HREWERNTQRLRDRERRENGRHTHTQ 105
           +HT T T+T    RE  R T R RDR +       H++
Sbjct: 8   RHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSE 45



 Score = 26.9 bits (58), Expect = 3.8
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 71  KHTGTHTQTHREWERNTQRLRDRER 95
           K    HT   RE +R T R RDR+R
Sbjct: 182 KERERHTDMERERQRETDRKRDRQR 206



 Score = 25.8 bits (55), Expect = 8.4
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 34 TTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNTQRLRDR 93
          T G  T  ET+   +QR+   +               +H+    Q  R+ ERN +R RDR
Sbjct: 5  TEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQ--RDRERNRERDRDR 62

Query: 94 ERRE 97
          ER +
Sbjct: 63 EREK 66


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 21  HAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTH 80
           H+ +   R R+R T    T+ E +++  + +   ++T        Q +  + +   T+  
Sbjct: 205 HSERGRERERERETE---TETERKRQTDRERDRQRKTER--EREKQAERERASERETERD 259

Query: 81  REWERNTQRLRDRERRENGRHTHTQTK 107
           +E ER   R RDR+RR+  R   T  K
Sbjct: 260 KERERERDRDRDRDRRQKERERQTDRK 286



 Score = 30.8 bits (68), Expect = 0.26
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 14/93 (15%)

Query: 28  RGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNT 87
           RGR R T G   + E Q++ ++ +    +           +  + T  + Q  RE E+N 
Sbjct: 137 RGRDRQTDG-QRERERQRDAEKERERQTDR----------ERQRQTERNRQKEREREKNR 185

Query: 88  QRLRDRER---RENGRHTHTQTKGHTAEALKHT 117
           Q  R+RER   +EN        +G   E  + T
Sbjct: 186 QERRERERQREKENKTEDRHSERGRERERERET 218



 Score = 27.3 bits (59), Expect = 2.9
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 11/97 (11%)

Query: 17  GPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTH 76
           G     A  D R R R       Q E ++  ++RQ   +ET        +   H+    H
Sbjct: 43  GQAHKDADGDDRERNR-------QKERERRREKRQTE-RETDRKRERRREKDRHRKRDRH 94

Query: 77  TQTHREWERNTQRLRDRER---RENGRHTHTQTKGHT 110
            +  R+ E+  +R  DRER   RE  R+   + +  T
Sbjct: 95  RERQRDREKERERQTDRERDRQREKERNRQKERERET 131



 Score = 26.9 bits (58), Expect = 3.8
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 66  QPKTHKHTGTHTQTHREWERNTQRLRDRE-RRENGRHTHTQTKG 108
           + +  + T       RE ERN Q+ R+RE  RE  R    QT G
Sbjct: 102 EKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDG 145



 Score = 26.6 bits (57), Expect = 4.9
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 68  KTHKHTGTHTQTHREWERNTQRLRDRER-RENGRHTHTQ 105
           +T +      +  RE ERN +R R+RER RE  R   T+
Sbjct: 296 ETERKRERQRERERERERNRKRERERERERERERQRETE 334



 Score = 26.6 bits (57), Expect = 4.9
 Identities = 16/66 (24%), Positives = 28/66 (42%)

Query: 40  QAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENG 99
           + E  +E ++ +   ++T +    + Q           +  RE ER+ Q  R+RE RE  
Sbjct: 332 ETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERD 391

Query: 100 RHTHTQ 105
           R    Q
Sbjct: 392 RDRDRQ 397


>gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens]
          Length = 349

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 30/120 (25%), Positives = 37/120 (30%), Gaps = 16/120 (13%)

Query: 19  GFHAAKADPRGRKRLTTGL-----MTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHT 73
           GF      P G   LT G+      T  E  ++  +     +E  L   GH  P      
Sbjct: 130 GFPFGSGPPEGWTELTMGVGPWREETWGELIEKCLESMCQGEEAELQLPGHSGPPVRLTL 189

Query: 74  GTHTQTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEA-----------LKHTPPGNP 122
            + TQ    WE  T       R E  R T     G+   A           L   PPG P
Sbjct: 190 ASFTQGRDSWELETSEKEALAREERARGTELFRAGNPEGAARCYGRALRLLLTLPPPGPP 249


>gi|11225260 DNA topoisomerase I [Homo sapiens]
          Length = 765

 Score = 31.2 bits (69), Expect = 0.20
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 69  THKHTGTHT-QTHREWERNTQRLRDRERRENGRHTHTQTKGHTAEALKH 116
           +HKH   H  + HR  E   ++ R++ +  N  H  ++ K    E  KH
Sbjct: 21  SHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKH 69


>gi|7706635 cornulin [Homo sapiens]
          Length = 495

 Score = 30.0 bits (66), Expect = 0.45
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 29  GRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTGHIQPKTHKHTGTHTQT------HRE 82
           GR    T   T  + +      Q   Q +     GH Q +   HT T TQT      H+ 
Sbjct: 251 GRTSKQTQEATNDQNRGTETHGQGRSQTSQAVTGGHAQIQAGTHTQTPTQTVEQDSSHQT 310

Query: 83  WERNTQRLRDRERRENGRHTHTQTKGHTAEAL 114
              +TQ       +  G   H Q +  T++A+
Sbjct: 311 GSTSTQTQESTNGQNRGTEIHGQGRSQTSQAV 342


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
          Length = 1341

 Score = 29.6 bits (65), Expect = 0.58
 Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 22   AAKADPRGRKRLTTGLMTQAETQKEVQQ---RQAAMQETALWFTGHIQPKTHKHTGTHTQ 78
            A +A  R ++R       Q E +KE ++   RQ   ++         + +  +       
Sbjct: 1242 AERAKEREKRRKEQEEEEQKEREKEAERERNRQLEREKRREHSRERDRERERERERDRGD 1301

Query: 79   THREWERNTQRLRDRERRENGRHTHTQTK 107
              R+ ER+ +R R+R+RR+  RH+ ++++
Sbjct: 1302 RDRDRERDRERGRERDRRDTKRHSRSRSR 1330



 Score = 25.8 bits (55), Expect = 8.4
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 10/51 (19%)

Query: 77   TQTHREWERNT--------QRLRDRERRENGRHTHTQTKGHTAEALKHTPP 119
            T++ REW+R+          R RDR R+E  R    + K    E  +  PP
Sbjct: 1159 TRSEREWDRDKVREGPRSRSRSRDRRRKE--RAKSKEKKSEKKEKAQEEPP 1207


>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 29.3 bits (64), Expect = 0.76
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 4   RQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTG 63
           R  + ++RR  +R P     ++  R R R T     +A   +   +R+   Q       G
Sbjct: 599 RNSIERERRR-NRSPSRERRRSRSRSRDRRTN----RASRSRSRDRRKIDDQR------G 647

Query: 64  HIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR 100
           ++   +HKH G   +  R+ ER+    +DR++++  R
Sbjct: 648 NLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKER 684


>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
           sapiens]
          Length = 805

 Score = 29.3 bits (64), Expect = 0.76
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 4   RQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALWFTG 63
           R  + ++RR  +R P     ++  R R R T     +A   +   +R+   Q       G
Sbjct: 599 RNSIERERRR-NRSPSRERRRSRSRSRDRRTN----RASRSRSRDRRKIDDQR------G 647

Query: 64  HIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGR 100
           ++   +HKH G   +  R+ ER+    +DR++++  R
Sbjct: 648 NLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKER 684


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.127    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,470,760
Number of Sequences: 37866
Number of extensions: 214896
Number of successful extensions: 1211
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 904
Number of HSP's gapped (non-prelim): 184
length of query: 122
length of database: 18,247,518
effective HSP length: 89
effective length of query: 33
effective length of database: 14,877,444
effective search space: 490955652
effective search space used: 490955652
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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