Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757419
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757419 PREDICTED: hypothetical protein [Homo sapiens]
(164 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757419 PREDICTED: hypothetical protein [Homo sapiens] 345 8e-96
gi|239751936 PREDICTED: hypothetical protein [Homo sapiens] 333 3e-92
gi|55750053 atrophin-1 [Homo sapiens] 44 8e-05
gi|55750041 atrophin-1 [Homo sapiens] 44 8e-05
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 37 0.010
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 37 0.010
gi|239747614 PREDICTED: similar to Putative uncharacterized prot... 36 0.013
gi|23510413 sorting nexin 26 [Homo sapiens] 35 0.029
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H... 35 0.038
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H... 35 0.038
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 34 0.050
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 34 0.050
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 34 0.050
gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 34 0.050
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 34 0.050
gi|239754149 PREDICTED: hypothetical protein XP_002345897 [Homo ... 34 0.065
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 34 0.065
gi|239748685 PREDICTED: hypothetical protein XP_002346753 [Homo ... 34 0.065
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 34 0.065
gi|239742708 PREDICTED: hypothetical protein XP_002342610 [Homo ... 34 0.065
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 34 0.065
gi|169214887 PREDICTED: similar to hCG2017976 [Homo sapiens] 33 0.085
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 33 0.085
gi|169215118 PREDICTED: hypothetical protein [Homo sapiens] 33 0.085
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 33 0.085
gi|169214613 PREDICTED: similar to hCG2017976 [Homo sapiens] 33 0.085
>gi|239757419 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 345 bits (886), Expect = 8e-96
Identities = 164/164 (100%), Positives = 164/164 (100%)
Query: 1 MNSFPNLGQESGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQ 60
MNSFPNLGQESGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQ
Sbjct: 1 MNSFPNLGQESGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQ 60
Query: 61 GESLRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPA 120
GESLRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPA
Sbjct: 61 GESLRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPA 120
Query: 121 FLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKEN 164
FLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKEN
Sbjct: 121 FLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKEN 164
>gi|239751936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 333 bits (855), Expect = 3e-92
Identities = 159/161 (98%), Positives = 159/161 (98%)
Query: 4 FPNLGQESGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQGES 63
F LGQESGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQGES
Sbjct: 37 FAALGQESGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQGES 96
Query: 64 LRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLP 123
LRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLP
Sbjct: 97 LRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLP 156
Query: 124 RPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKEN 164
RPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKEN
Sbjct: 157 RPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKEN 197
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 43.5 bits (101), Expect = 8e-05
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 17/132 (12%)
Query: 27 PRGPRHHGNCRQPA-PTAGKRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPK-PAAKSA 84
P GP+ G P GK+ P P + + ++ P P + VGG P+A
Sbjct: 232 PMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPP 291
Query: 85 KSFPR---RLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRERGLRAEW 141
+FP L L P +AS LG+ PLP L PSP +G+ GL
Sbjct: 292 ANFPHVTPNLPPPPALRP---LNNASASPPGLGAQPLPGHL--PSPHAMGQGMGGL---- 342
Query: 142 VGEPPGSIRQPT 153
PPG + PT
Sbjct: 343 ---PPGPEKGPT 351
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 43.5 bits (101), Expect = 8e-05
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 17/132 (12%)
Query: 27 PRGPRHHGNCRQPA-PTAGKRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPK-PAAKSA 84
P GP+ G P GK+ P P + + ++ P P + VGG P+A
Sbjct: 232 PMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPP 291
Query: 85 KSFPR---RLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRERGLRAEW 141
+FP L L P +AS LG+ PLP L PSP +G+ GL
Sbjct: 292 ANFPHVTPNLPPPPALRP---LNNASASPPGLGAQPLPGHL--PSPHAMGQGMGGL---- 342
Query: 142 VGEPPGSIRQPT 153
PPG + PT
Sbjct: 343 ---PPGPEKGPT 351
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 41.6 bits (96), Expect = 3e-04
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 11 SGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLG-LRAAQGESLRPPAP 69
+G G E L W G +P P A R P R + +R+ +G + PAP
Sbjct: 38 AGRGLEALGRDW----------RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAP 87
Query: 70 ASLHVGGPKP---AAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPS 126
VG +P AA++A + PR LR R R A ++ + P P+ P PS
Sbjct: 88 PDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPS 147
Query: 127 P 127
P
Sbjct: 148 P 148
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 41.6 bits (96), Expect = 3e-04
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 11 SGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLG-LRAAQGESLRPPAP 69
+G G E L W G +P P A R P R + +R+ +G + PAP
Sbjct: 38 AGRGLEALGRDW----------RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAP 87
Query: 70 ASLHVGGPKP---AAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPS 126
VG +P AA++A + PR LR R R A ++ + P P+ P PS
Sbjct: 88 PDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPS 147
Query: 127 P 127
P
Sbjct: 148 P 148
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 41.6 bits (96), Expect = 3e-04
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 14/121 (11%)
Query: 11 SGDGEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYSLG-LRAAQGESLRPPAP 69
+G G E L W G +P P A R P R + +R+ +G + PAP
Sbjct: 38 AGRGLEALGRDW----------RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAP 87
Query: 70 ASLHVGGPKP---AAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPS 126
VG +P AA++A + PR LR R R A ++ + P P+ P PS
Sbjct: 88 PDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPS 147
Query: 127 P 127
P
Sbjct: 148 P 148
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 37.4 bits (85), Expect = 0.006
Identities = 39/139 (28%), Positives = 51/139 (36%), Gaps = 19/139 (13%)
Query: 26 LPRGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKSAK 85
+ RG R + R PAP + P+P +G PA S P P + +
Sbjct: 1 MERGQRFTPHPRTPAPGCPEVAPQP---------EGTDAPGPAVCSPTARAPPPILPAPQ 51
Query: 86 SFPRRLRDRKCLGPGGGRTRVAASALS------LGSVPLPAFLPRPSPWQLGRRERGLRA 139
P R R+ + G T V A+ L+ LG VPL P P R RG
Sbjct: 52 RPPTRAREWEGAAWAAGATGVGAALLALPGSRRLGRVPLTFREASPGPAPGAPRARGS-- 109
Query: 140 EWVGEPPGSIRQPTRSDEG 158
G PG R+ S G
Sbjct: 110 --CGREPGPRRRRAPSSAG 126
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 36.6 bits (83), Expect = 0.010
Identities = 43/135 (31%), Positives = 55/135 (40%), Gaps = 20/135 (14%)
Query: 27 PRGPRHHGNCRQPAPTAGKRGPEPRYSLGL-RAAQGE----SLRPPAPASL--HVGGPKP 79
PRGP G R +AG +G + R L L R QG + PP+P S G P+P
Sbjct: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
Query: 80 AAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRERGLRA 139
A SA+ P+ L GP R+R A P A R ++GR RG
Sbjct: 66 ATPSARR-PQGLSAGVSAGP-AQRSRPLQLAGPRDRAPARALHART---RMGRAARG--- 117
Query: 140 EWVGEPPGSIRQPTR 154
PP R P +
Sbjct: 118 -----PPAPSRGPLK 127
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 36.6 bits (83), Expect = 0.010
Identities = 43/135 (31%), Positives = 55/135 (40%), Gaps = 20/135 (14%)
Query: 27 PRGPRHHGNCRQPAPTAGKRGPEPRYSLGL-RAAQGE----SLRPPAPASL--HVGGPKP 79
PRGP G R +AG +G + R L L R QG + PP+P S G P+P
Sbjct: 6 PRGPHQGGTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRSRPEGPGPPRP 65
Query: 80 AAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRERGLRA 139
A SA+ P+ L GP R+R A P A R ++GR RG
Sbjct: 66 ATPSARR-PQGLSAGVSAGP-AQRSRPLQLAGPRDRAPARALHART---RMGRAARG--- 117
Query: 140 EWVGEPPGSIRQPTR 154
PP R P +
Sbjct: 118 -----PPAPSRGPLK 127
>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 259
Score = 36.2 bits (82), Expect = 0.013
Identities = 39/120 (32%), Positives = 47/120 (39%), Gaps = 25/120 (20%)
Query: 22 WDLALPRGPRHHGNCRQP----APTAGKRGPE---PRYSLGLRAAQGESLRPPAPASL-- 72
W L P G R G+ R A +AG PE R SLGL AA P L
Sbjct: 100 WHLQAPNGLRSVGSSRPSLGLLAASAGPNRPEVGLSRPSLGLPAASAGPSHPQIGLELGL 159
Query: 73 ---HVGGPKP-AAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPW 128
VG P P + SA S PG RV+ S S +P+ +F +PS W
Sbjct: 160 EEQQVGLPGPNSVLSAAS------------PGAKLPRVSLSRPSSSCLPVASFXAQPSSW 207
>gi|23510413 sorting nexin 26 [Homo sapiens]
Length = 1126
Score = 35.0 bits (79), Expect = 0.029
Identities = 37/123 (30%), Positives = 42/123 (34%), Gaps = 26/123 (21%)
Query: 50 PRYSLGLRAAQGESLRPPAPASLHVG------GPKPAAKSAKSFPRRLRDRKCLGPGGGR 103
P LG A Q + RP P L+V GP PA+ S+ S P R R GP R
Sbjct: 985 PPDHLGYSAPQHPARRPTPPEPLYVNLALGPRGPSPASSSSSSPPAHPRSRSDPGPPVPR 1044
Query: 104 ----------TRVAASALSLGSVPLPAFLPRPSPWQLGR----------RERGLRAEWVG 143
R P P L R +P GR R G R E G
Sbjct: 1045 LPQKQRAPWGPRTPHRVPGPWGPPEPLLLYRAAPPAYGRGGELHRGSLYRNGGQRGEGAG 1104
Query: 144 EPP 146
PP
Sbjct: 1105 PPP 1107
>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform b [Homo sapiens]
Length = 2347
Score = 34.7 bits (78), Expect = 0.038
Identities = 33/127 (25%), Positives = 45/127 (35%), Gaps = 27/127 (21%)
Query: 33 HGNCRQPAPTAGK--------RGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKSA 84
HG+ R+P P G P S G ES+ A H+ GP+ A+ A
Sbjct: 533 HGSPRRPGPEPGACDTRLVRAGAPPSPPSPGRGPPDAESVHSIYHADCHIEGPQERARVA 592
Query: 85 KSFPRRLRDRKCLGPGGGRTRVAAS---ALSLGSVPLPAFLPRPSPWQLGRRERGLRAEW 141
+ AAS A LG++ P LP G G + +W
Sbjct: 593 HA----------------AATAAASLRLATGLGTMNYPTILPSGVGSGKGSTSPGPKGKW 636
Query: 142 VGEPPGS 148
G PPG+
Sbjct: 637 AGGPPGT 643
>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
subunit isoform a [Homo sapiens]
Length = 2353
Score = 34.7 bits (78), Expect = 0.038
Identities = 33/127 (25%), Positives = 45/127 (35%), Gaps = 27/127 (21%)
Query: 33 HGNCRQPAPTAGK--------RGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKSA 84
HG+ R+P P G P S G ES+ A H+ GP+ A+ A
Sbjct: 533 HGSPRRPGPEPGACDTRLVRAGAPPSPPSPGRGPPDAESVHSIYHADCHIEGPQERARVA 592
Query: 85 KSFPRRLRDRKCLGPGGGRTRVAAS---ALSLGSVPLPAFLPRPSPWQLGRRERGLRAEW 141
+ AAS A LG++ P LP G G + +W
Sbjct: 593 HA----------------AATAAASLRLATGLGTMNYPTILPSGVGSGKGSTSPGPKGKW 636
Query: 142 VGEPPGS 148
G PPG+
Sbjct: 637 AGGPPGT 643
>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
Length = 264
Score = 34.3 bits (77), Expect = 0.050
Identities = 41/124 (33%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 28 RGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAA-QGESLRPPAPASLHVGGPKPAAKSAKS 86
R P C + AG RG E + G R A Q + P PA+ P P
Sbjct: 42 RPPLQRARCYR---AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAP------- 91
Query: 87 FPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRER----GLRAEWV 142
R R+ L PG VAA A+S G PL L +P P GLRA W
Sbjct: 92 -----RGRRLLLPGA----VAACAVSDGQ-PLSPPLRQPRPAARAPEGALASCGLRAGWA 141
Query: 143 GEPP 146
G PP
Sbjct: 142 GWPP 145
>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 34.3 bits (77), Expect = 0.050
Identities = 41/124 (33%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 28 RGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAA-QGESLRPPAPASLHVGGPKPAAKSAKS 86
R P C + AG RG E + G R A Q + P PA+ P P
Sbjct: 36 RPPLQRARCYR---AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAP------- 85
Query: 87 FPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRER----GLRAEWV 142
R R+ L PG VAA A+S G PL L +P P GLRA W
Sbjct: 86 -----RGRRLLLPGA----VAACAVSDGQ-PLSPPLRQPRPAARAPEGALASCGLRAGWA 135
Query: 143 GEPP 146
G PP
Sbjct: 136 GWPP 139
>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
Length = 317
Score = 34.3 bits (77), Expect = 0.050
Identities = 41/124 (33%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 28 RGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAA-QGESLRPPAPASLHVGGPKPAAKSAKS 86
R P C + AG RG E + G R A Q + P PA+ P P
Sbjct: 36 RPPLQRARCYR---AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAP------- 85
Query: 87 FPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRER----GLRAEWV 142
R R+ L PG VAA A+S G PL L +P P GLRA W
Sbjct: 86 -----RGRRLLLPGA----VAACAVSDGQ-PLSPPLRQPRPAARAPEGALASCGLRAGWA 135
Query: 143 GEPP 146
G PP
Sbjct: 136 GWPP 139
>gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase
PRKX (Protein kinase PKX1) [Homo sapiens]
Length = 330
Score = 34.3 bits (77), Expect = 0.050
Identities = 41/124 (33%), Positives = 48/124 (38%), Gaps = 25/124 (20%)
Query: 28 RGPRHHGNCRQPAPTAGKRGPEPRYSLGLRAA-QGESLRPPAPASLHVGGPKPAAKSAKS 86
R P C + AG RG E + G R A Q + P PA+ P P
Sbjct: 49 RPPLQRARCYR---AAGGRGRETGNAQGPRLALQARAAAPAFPAASRRSVPAP------- 98
Query: 87 FPRRLRDRKCLGPGGGRTRVAASALSLGSVPLPAFLPRPSPWQLGRRER----GLRAEWV 142
R R+ L PG VAA A+S G PL L +P P GLRA W
Sbjct: 99 -----RGRRLLLPGA----VAACAVSDGQ-PLSPPLRQPRPAARAPEGALASCGLRAGWA 148
Query: 143 GEPP 146
G PP
Sbjct: 149 GWPP 152
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 34.3 bits (77), Expect = 0.050
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 7 LGQESGDGEEQLH--ATWDLALPRGPRHHGNCRQPAPTA------GKRGPEPRYSLGLRA 58
+G + G G E++ A LA +G R G R A A G R + G RA
Sbjct: 19 IGVQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARRGGGARERPAEGARGPRA 78
Query: 59 AQGESLRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGRTRVAASALSLGSVPL 118
A+G + P P+S G +PA + S R L + +S+ S+G P
Sbjct: 79 ARGGARAAPMPSSAPRGPTEPALRRPSSAERPL------------AQAPSSSASVGRAPG 126
Query: 119 PAFLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLKE 163
P S +E G+P G +P R ++ P +E
Sbjct: 127 AMASPSRS------------SEATGKPRGRDGRPRREEDDVPPEE 159
>gi|239754149 PREDICTED: hypothetical protein XP_002345897 [Homo
sapiens]
Length = 274
Score = 33.9 bits (76), Expect = 0.065
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 106 VAASALSLGSVPLPAFLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLK 162
V AS + LG P P+ LP+ P G R++ +R +W E S R S G K
Sbjct: 36 VTASQVELGLRPGPSDLPKTEPGLRGGRKKSVRQQWWAESAASRRTLEGSAGGGEAK 92
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 33.9 bits (76), Expect = 0.065
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 14 GEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYS----LGLRAAQGESLRPPAP 69
G + TW L + RGPR PAP R PR + + RAA+G P P
Sbjct: 41 GRARRRGTW-LRVLRGPR----APSPAPALPARARPPRENRKRAVPARAARGP---PKRP 92
Query: 70 ASLHVGGPKPAAKSAKSFPRRLR 92
A GG + A+ +S PRR R
Sbjct: 93 AGGQTGGVEAASGEERSQPRRPR 115
>gi|239748685 PREDICTED: hypothetical protein XP_002346753 [Homo
sapiens]
Length = 274
Score = 33.9 bits (76), Expect = 0.065
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 106 VAASALSLGSVPLPAFLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLK 162
V AS + LG P P+ LP+ P G R++ +R +W E S R S G K
Sbjct: 36 VTASQVELGLRPGPSDLPKTEPGLRGGRKKSVRQQWWAESAASRRTLEGSAGGGEAK 92
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 33.9 bits (76), Expect = 0.065
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 14 GEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYS----LGLRAAQGESLRPPAP 69
G + TW L + RGPR PAP R PR + + RAA+G P P
Sbjct: 41 GRARRRGTW-LRVLRGPR----APSPAPALPARARPPRENRKRAVPARAARGP---PKRP 92
Query: 70 ASLHVGGPKPAAKSAKSFPRRLR 92
A GG + A+ +S PRR R
Sbjct: 93 AGGQTGGVEAASGEERSQPRRPR 115
>gi|239742708 PREDICTED: hypothetical protein XP_002342610 [Homo
sapiens]
Length = 274
Score = 33.9 bits (76), Expect = 0.065
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 106 VAASALSLGSVPLPAFLPRPSPWQLGRRERGLRAEWVGEPPGSIRQPTRSDEGAPLK 162
V AS + LG P P+ LP+ P G R++ +R +W E S R S G K
Sbjct: 36 VTASQVELGLRPGPSDLPKTEPGLRGGRKKSVRQQWWAESAASRRTLEGSAGGGEAK 92
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 33.9 bits (76), Expect = 0.065
Identities = 29/83 (34%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 14 GEEQLHATWDLALPRGPRHHGNCRQPAPTAGKRGPEPRYS----LGLRAAQGESLRPPAP 69
G + TW L + RGPR PAP R PR + + RAA+G P P
Sbjct: 41 GRARRRGTW-LRVLRGPR----APSPAPALPARARPPRENRKRAVPARAARGP---PKRP 92
Query: 70 ASLHVGGPKPAAKSAKSFPRRLR 92
A GG + A+ +S PRR R
Sbjct: 93 AGGQTGGVEAASGEERSQPRRPR 115
>gi|169214887 PREDICTED: similar to hCG2017976 [Homo sapiens]
Length = 271
Score = 33.5 bits (75), Expect = 0.085
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 26 LPRGPRHHG--NCRQPAPTAGKRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKS 83
LP G G +CR P G RGP P + + E+ R P L G P+P A S
Sbjct: 85 LPAGTPRPGAASCRPFCPR-GSRGPMPYPAARFARGEAEARRRILPPVLPAGKPRPGAVS 143
Query: 84 AKSF-PRRLRDRKCLGPGGGR-TRVAASALSLGSVPLPAFLPR----PSPWQLGRRER 135
+ F PR R GP R R A L F PR P+P+ R R
Sbjct: 144 CRPFYPRGSR-----GPAPYRAARFARGEAEARRRILWPFYPRESRGPAPYPAARFTR 196
Score = 29.3 bits (64), Expect = 1.6
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 45 KRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKSAKSF-PRRLRD-------RKC 96
K G + Y +G ++ + L P PA G P+P A S + F PR R R
Sbjct: 62 KVGADIGYLIGPCSSAADILPPILPA----GTPRPGAASCRPFCPRGSRGPMPYPAARFA 117
Query: 97 LGPGGGRTRVAASALSL-----GSVPLPAFLPR----PSPWQLGRRERG 136
G R R+ L G+V F PR P+P++ R RG
Sbjct: 118 RGEAEARRRILPPVLPAGKPRPGAVSCRPFYPRGSRGPAPYRAARFARG 166
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 33.5 bits (75), Expect = 0.085
Identities = 46/147 (31%), Positives = 51/147 (34%), Gaps = 20/147 (13%)
Query: 29 GPRHHGNCRQPAPTAGKRGPEPRYS----LGLRAAQGESLRPPAPASLHVGGPKPAAKSA 84
GPR G + P G GP P S G R + G P AS G P P +
Sbjct: 90 GPRRGGLRSRTDPAFGA-GPLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTT 148
Query: 85 KSFPRRLRDRKCLGPGGGRTRVAASALSLGSVP-LPAFLPRPSPWQLGRR-ERGLRAEWV 142
FP PGG R R +A G P L L P Q RR + RA W
Sbjct: 149 FVFPPGKTSAPRPSPGGRRGRPLGAARGTGLNPGLSPRLQEPRGHQSARRTDTASRAGWA 208
Query: 143 -----------GEPPGSIRQPTRSDEG 158
G P GS R R D G
Sbjct: 209 TRRAPSRRRNFGAPRGSRR--LRPDAG 233
>gi|169215118 PREDICTED: hypothetical protein [Homo sapiens]
Length = 271
Score = 33.5 bits (75), Expect = 0.085
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 26 LPRGPRHHG--NCRQPAPTAGKRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKS 83
LP G G +CR P G RGP P + + E+ R P L G P+P A S
Sbjct: 85 LPAGTPRPGAASCRPFCPR-GSRGPMPYPAARFARGEAEARRRILPPVLPAGKPRPGAVS 143
Query: 84 AKSF-PRRLRDRKCLGPGGGR-TRVAASALSLGSVPLPAFLPR----PSPWQLGRRER 135
+ F PR R GP R R A L F PR P+P+ R R
Sbjct: 144 CRPFYPRGSR-----GPAPYRAARFARGEAEARRRILWPFYPRESRGPAPYPAARFTR 196
Score = 29.3 bits (64), Expect = 1.6
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 45 KRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKSAKSF-PRRLRD-------RKC 96
K G + Y +G ++ + L P PA G P+P A S + F PR R R
Sbjct: 62 KVGADIGYLIGPCSSAADILPPILPA----GTPRPGAASCRPFCPRGSRGPMPYPAARFA 117
Query: 97 LGPGGGRTRVAASALSL-----GSVPLPAFLPR----PSPWQLGRRERG 136
G R R+ L G+V F PR P+P++ R RG
Sbjct: 118 RGEAEARRRILPPVLPAGKPRPGAVSCRPFYPRGSRGPAPYRAARFARG 166
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 33.5 bits (75), Expect = 0.085
Identities = 46/147 (31%), Positives = 51/147 (34%), Gaps = 20/147 (13%)
Query: 29 GPRHHGNCRQPAPTAGKRGPEPRYS----LGLRAAQGESLRPPAPASLHVGGPKPAAKSA 84
GPR G + P G GP P S G R + G P AS G P P +
Sbjct: 90 GPRRGGLRSRTDPAFGA-GPLPLVSRLGHAGERGSPGAGDVNPVSASSPPGRPDPLLLTT 148
Query: 85 KSFPRRLRDRKCLGPGGGRTRVAASALSLGSVP-LPAFLPRPSPWQLGRR-ERGLRAEWV 142
FP PGG R R +A G P L L P Q RR + RA W
Sbjct: 149 FVFPPGKTSAPRPSPGGRRGRPLGAARGTGLNPGLSPRLQEPRGHQSARRTDTASRAGWA 208
Query: 143 -----------GEPPGSIRQPTRSDEG 158
G P GS R R D G
Sbjct: 209 TRRAPSRRRNFGAPRGSRR--LRPDAG 233
>gi|169214613 PREDICTED: similar to hCG2017976 [Homo sapiens]
Length = 289
Score = 33.5 bits (75), Expect = 0.085
Identities = 38/118 (32%), Positives = 46/118 (38%), Gaps = 14/118 (11%)
Query: 26 LPRGPRHHG--NCRQPAPTAGKRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKS 83
LP G G +CR P G RGP P + + E+ R P L G P+P A S
Sbjct: 103 LPAGTPRPGAASCRPFCPR-GSRGPMPYPAARFARGEAEARRRILPPVLPAGKPRPGAVS 161
Query: 84 AKSF-PRRLRDRKCLGPGGGR-TRVAASALSLGSVPLPAFLPR----PSPWQLGRRER 135
+ F PR R GP R R A L F PR P+P+ R R
Sbjct: 162 CRPFYPRGSR-----GPAPYRAARFARGEAEARRRILWPFYPRESRGPAPYPAARFTR 214
Score = 29.3 bits (64), Expect = 1.6
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 45 KRGPEPRYSLGLRAAQGESLRPPAPASLHVGGPKPAAKSAKSF-PRRLRD-------RKC 96
K G + Y +G ++ + L P PA G P+P A S + F PR R R
Sbjct: 80 KVGADIGYLIGPCSSAADILPPILPA----GTPRPGAASCRPFCPRGSRGPMPYPAARFA 135
Query: 97 LGPGGGRTRVAASALSL-----GSVPLPAFLPR----PSPWQLGRRERG 136
G R R+ L G+V F PR P+P++ R RG
Sbjct: 136 RGEAEARRRILPPVLPAGKPRPGAVSCRPFYPRGSRGPAPYRAARFARG 184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,463,087
Number of Sequences: 37866
Number of extensions: 619382
Number of successful extensions: 2152
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 273
Number of HSP's that attempted gapping in prelim test: 1991
Number of HSP's gapped (non-prelim): 440
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.