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Search of human proteins with 239756970
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756970 PREDICTED: hypothetical protein XP_002345126 [Homo
sapiens]
(148 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756970 PREDICTED: hypothetical protein XP_002345126 [Homo ... 308 1e-84
gi|239751479 PREDICTED: hypothetical protein [Homo sapiens] 308 1e-84
gi|123173757 RAVER1 [Homo sapiens] 35 0.023
gi|32698704 tectonin beta-propeller repeat containing 1 [Homo sa... 30 0.74
gi|239752392 PREDICTED: hypothetical protein XP_002348220 [Homo ... 29 1.3
gi|239746909 PREDICTED: hypothetical protein XP_002343871 [Homo ... 29 1.3
gi|188536080 4-aminobutyrate aminotransferase precursor [Homo sa... 28 2.1
gi|38679950 4-aminobutyrate aminotransferase precursor [Homo sap... 28 2.1
gi|38679946 4-aminobutyrate aminotransferase precursor [Homo sap... 28 2.1
gi|53829376 plakophilin 4 isoform b [Homo sapiens] 28 3.7
gi|53829374 plakophilin 4 isoform a [Homo sapiens] 28 3.7
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 28 3.7
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 28 3.7
gi|21536371 telomerase-associated protein 1 [Homo sapiens] 27 4.8
gi|197333868 T-box 2 [Homo sapiens] 27 4.8
gi|27501450 axin 1 isoform a [Homo sapiens] 27 4.8
gi|31083144 axin 1 isoform b [Homo sapiens] 27 4.8
gi|239750208 PREDICTED: hypothetical protein [Homo sapiens] 27 4.8
gi|239744514 PREDICTED: hypothetical protein [Homo sapiens] 27 4.8
gi|45387953 potassium channel tetramerization domain containing ... 27 6.2
gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] 27 6.2
gi|169210237 PREDICTED: hypothetical protein [Homo sapiens] 27 8.2
gi|169168737 PREDICTED: hypothetical protein [Homo sapiens] 27 8.2
gi|169210128 PREDICTED: hypothetical protein [Homo sapiens] 27 8.2
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 27 8.2
gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens] 27 8.2
gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens] 27 8.2
gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens] 27 8.2
gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens] 27 8.2
>gi|239756970 PREDICTED: hypothetical protein XP_002345126 [Homo
sapiens]
Length = 148
Score = 308 bits (788), Expect = 1e-84
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVL 60
MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVL
Sbjct: 1 MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVL 60
Query: 61 RSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS 120
RSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS
Sbjct: 61 RSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS 120
Query: 121 GREGSGSGWESHLLLGTSGWVLLACRLF 148
GREGSGSGWESHLLLGTSGWVLLACRLF
Sbjct: 121 GREGSGSGWESHLLLGTSGWVLLACRLF 148
>gi|239751479 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 308 bits (788), Expect = 1e-84
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVL 60
MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVL
Sbjct: 1 MASGELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVL 60
Query: 61 RSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS 120
RSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS
Sbjct: 61 RSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS 120
Query: 121 GREGSGSGWESHLLLGTSGWVLLACRLF 148
GREGSGSGWESHLLLGTSGWVLLACRLF
Sbjct: 121 GREGSGSGWESHLLLGTSGWVLLACRLF 148
>gi|123173757 RAVER1 [Homo sapiens]
Length = 756
Score = 35.0 bits (79), Expect = 0.023
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 50 STWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHG--GHLPSGGTRP 96
ST L A + +++ GILG S +++PGA PA+ G LP+GG P
Sbjct: 394 STALLQLALQTQGQKKPGILGDSPLGALQPGAQPANPLLGELPAGGGLP 442
>gi|32698704 tectonin beta-propeller repeat containing 1 [Homo
sapiens]
Length = 1165
Score = 30.0 bits (66), Expect = 0.74
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 11/67 (16%)
Query: 23 SKGNIVHRDGVQPKCPRTQTALRIGVGSTWP--LATAQVLRSERREGILGTSGHSSMEPG 80
S+G + HR GVQP P+ G+G W A R+ R S EP
Sbjct: 1103 SRGTVCHRTGVQPHEPKGH-GWDYGIGGGWDHISVRANATRAPR-------SSSQEQEPS 1154
Query: 81 AAP-AHG 86
A P AHG
Sbjct: 1155 APPEAHG 1161
Score = 27.7 bits (60), Expect = 3.7
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 19/99 (19%)
Query: 11 GRTKVHTFEALESKGNIVHRDGVQPKCPR-------TQTALRIGVG---STWPLAT-AQV 59
G+T V+ AL+ GN+ +R G+ P P+ + R+ VG W +A Q
Sbjct: 1042 GQTSVY---ALDENGNLWYRQGITPSYPQGSSWEHVSNNVCRVSVGPLDQVWVIANKVQG 1098
Query: 60 LRSERREGILGTSGH-SSMEPGAAPAHGGHLPSGGTRPH 97
S R GT H + ++P HG GG H
Sbjct: 1099 SHSLSR----GTVCHRTGVQPHEPKGHGWDYGIGGGWDH 1133
>gi|239752392 PREDICTED: hypothetical protein XP_002348220 [Homo
sapiens]
Length = 189
Score = 29.3 bits (64), Expect = 1.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 72 SGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQ-----QTRAQQKVTAQTLLSGREGSG 126
SG+ ++ P G +LP G P R S Q + + QK TA L GR G+
Sbjct: 17 SGNGALVPTGQGCRGRNLPIQGYSPEGRPTASSQPAGAWHSESSQKGTACPLALGRGGAR 76
Query: 127 SG 128
G
Sbjct: 77 GG 78
>gi|239746909 PREDICTED: hypothetical protein XP_002343871 [Homo
sapiens]
Length = 189
Score = 29.3 bits (64), Expect = 1.3
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 72 SGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQ-----QTRAQQKVTAQTLLSGREGSG 126
SG+ ++ P G +LP G P R S Q + + QK TA L GR G+
Sbjct: 17 SGNGALVPTGQGCRGRNLPIQGYSPEGRPTASSQPAGAWHSESSQKGTACPLALGRGGAR 76
Query: 127 SG 128
G
Sbjct: 77 GG 78
>gi|188536080 4-aminobutyrate aminotransferase precursor [Homo
sapiens]
Length = 500
Score = 28.5 bits (62), Expect = 2.1
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 5 ELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSER 64
E WG + V TF G H++ +P P +G S L A+V+ +
Sbjct: 342 EHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSK-NLLLAEVINIIK 400
Query: 65 REGILGTSGHS 75
RE +L + H+
Sbjct: 401 REDLLNNAAHA 411
>gi|38679950 4-aminobutyrate aminotransferase precursor [Homo
sapiens]
Length = 500
Score = 28.5 bits (62), Expect = 2.1
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 5 ELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSER 64
E WG + V TF G H++ +P P +G S L A+V+ +
Sbjct: 342 EHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSK-NLLLAEVINIIK 400
Query: 65 REGILGTSGHS 75
RE +L + H+
Sbjct: 401 REDLLNNAAHA 411
>gi|38679946 4-aminobutyrate aminotransferase precursor [Homo
sapiens]
Length = 500
Score = 28.5 bits (62), Expect = 2.1
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 5 ELWGGEGRTKVHTFEALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSER 64
E WG + V TF G H++ +P P +G S L A+V+ +
Sbjct: 342 EHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSK-NLLLAEVINIIK 400
Query: 65 REGILGTSGHS 75
RE +L + H+
Sbjct: 401 REDLLNNAAHA 411
>gi|53829376 plakophilin 4 isoform b [Homo sapiens]
Length = 1149
Score = 27.7 bits (60), Expect = 3.7
Identities = 19/68 (27%), Positives = 26/68 (38%)
Query: 20 ALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSERREGILGTSGHSSMEP 79
A+ G++ R P P Q VGS L AQ + +G +G+S
Sbjct: 284 AIRRIGSVTSRQTSNPNGPTPQYQTTARVGSPLTLTDAQTRVASPSQGQVGSSSPKRSGM 343
Query: 80 GAAPAHGG 87
A P H G
Sbjct: 344 TAVPQHLG 351
>gi|53829374 plakophilin 4 isoform a [Homo sapiens]
Length = 1192
Score = 27.7 bits (60), Expect = 3.7
Identities = 19/68 (27%), Positives = 26/68 (38%)
Query: 20 ALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSERREGILGTSGHSSMEP 79
A+ G++ R P P Q VGS L AQ + +G +G+S
Sbjct: 284 AIRRIGSVTSRQTSNPNGPTPQYQTTARVGSPLTLTDAQTRVASPSQGQVGSSSPKRSGM 343
Query: 80 GAAPAHGG 87
A P H G
Sbjct: 344 TAVPQHLG 351
>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 27.7 bits (60), Expect = 3.7
Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 15/118 (12%)
Query: 20 ALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSER---REGILGTSG--- 73
AL G+ R V CP + R+G+G P+A A LR +R R I T G
Sbjct: 580 ALRGDGSRARRAIVPTTCPLCEIWSRVGIGIA-PIADA--LRRDRSPVRRAIAPTPGTLS 636
Query: 74 --HSSMEPGAAPAHGGHLPSGGTRPHA-RCFTSDQQTRAQQKVTAQTLLSGREGSGSG 128
S AP G G RP + R S T +K A T L+ G+ G
Sbjct: 637 GYRSRARTAIAPTPG---TLRGYRPRSRRAIASTPATLRGEKSRAHTSLAPAPGALRG 691
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 27.7 bits (60), Expect = 3.7
Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 15/118 (12%)
Query: 20 ALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSER---REGILGTSG--- 73
AL G+ R V CP + R+G+G P+A A LR +R R I T G
Sbjct: 580 ALRGDGSRARRAIVPTTCPLCEIWSRVGIGIA-PIADA--LRRDRSPVRRAIAPTPGTLS 636
Query: 74 --HSSMEPGAAPAHGGHLPSGGTRPHA-RCFTSDQQTRAQQKVTAQTLLSGREGSGSG 128
S AP G G RP + R S T +K A T L+ G+ G
Sbjct: 637 GYRSRARTAIAPTPG---TLRGYRPRSRRAIASTPATLRGEKSRAHTSLAPAPGALRG 691
>gi|21536371 telomerase-associated protein 1 [Homo sapiens]
Length = 2627
Score = 27.3 bits (59), Expect = 4.8
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 62 SERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLS- 120
S R+G L H +E + PAH G P + C + + A Q + +++
Sbjct: 2163 SVSRDGTLKVWDHQGVELTSIPAHSG--------PISHCAAAMEPRAAGQPGSELLVVTV 2214
Query: 121 GREGSGSGW------ESHLLLGTSGWVLLA 144
G +G+ W ++H LLG SG V A
Sbjct: 2215 GLDGATRLWHPLLVCQTHTLLGHSGPVRAA 2244
>gi|197333868 T-box 2 [Homo sapiens]
Length = 712
Score = 27.3 bits (59), Expect = 4.8
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 13/79 (16%)
Query: 19 EALESKGNIVHRDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSERREGILGTS------ 72
EA E K G+ P +T +A +G G LA + L ++ G LG
Sbjct: 438 EAAEGK-----EQGLAPLVVQTDSASPLGAGHLPGLAFSSHLHGQQFFGPLGAGQPLFLH 492
Query: 73 -GHSSMEPGAAPAHG-GHL 89
G +M PGA A G GHL
Sbjct: 493 PGQFTMGPGAFSAMGMGHL 511
>gi|27501450 axin 1 isoform a [Homo sapiens]
Length = 862
Score = 27.3 bits (59), Expect = 4.8
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Query: 72 SGHSSMEP----GAAPAHGGHLPSGGTR---------PHARCFTSDQQTRAQQKVTAQTL 118
SGH + P GAA HG H+P G + H R +++V A+
Sbjct: 496 SGHVAKMPVALGGAASGHGKHVPKSGAKLDAAGLHHHRHVHHHVHHSTARPKEQVEAEAT 555
Query: 119 LSGREGSGSGWESH 132
+ G E H
Sbjct: 556 RRAQSSFAWGLEPH 569
>gi|31083144 axin 1 isoform b [Homo sapiens]
Length = 826
Score = 27.3 bits (59), Expect = 4.8
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 13/74 (17%)
Query: 72 SGHSSMEP----GAAPAHGGHLPSGGTR---------PHARCFTSDQQTRAQQKVTAQTL 118
SGH + P GAA HG H+P G + H R +++V A+
Sbjct: 496 SGHVAKMPVALGGAASGHGKHVPKSGAKLDAAGLHHHRHVHHHVHHSTARPKEQVEAEAT 555
Query: 119 LSGREGSGSGWESH 132
+ G E H
Sbjct: 556 RRAQSSFAWGLEPH 569
>gi|239750208 PREDICTED: hypothetical protein [Homo sapiens]
Length = 92
Score = 27.3 bits (59), Expect = 4.8
Identities = 16/70 (22%), Positives = 25/70 (35%)
Query: 30 RDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHL 89
R P P + GV + +P + R+G+ G S+ PG+ P+ G
Sbjct: 19 RQAGAPWVPERRKRRPDGVSTVFPEPHVSTAQCRERQGLQGNYQTHSLSPGSLPSSGTEK 78
Query: 90 PSGGTRPHAR 99
G R
Sbjct: 79 AHHGLHSRTR 88
>gi|239744514 PREDICTED: hypothetical protein [Homo sapiens]
Length = 92
Score = 27.3 bits (59), Expect = 4.8
Identities = 16/70 (22%), Positives = 25/70 (35%)
Query: 30 RDGVQPKCPRTQTALRIGVGSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHL 89
R P P + GV + +P + R+G+ G S+ PG+ P+ G
Sbjct: 19 RQAGAPWVPERRKRRPDGVSTVFPEPHVSTAQCRERQGLQGNYQTHSLSPGSLPSSGTEK 78
Query: 90 PSGGTRPHAR 99
G R
Sbjct: 79 AHHGLHSRTR 88
>gi|45387953 potassium channel tetramerization domain containing 18
[Homo sapiens]
Length = 426
Score = 26.9 bits (58), Expect = 6.2
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 57 AQVLRSERREGILGTS--GHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKV 113
AQ R ++GT GH PGAA A G G P A+ SD++ Q+ +
Sbjct: 323 AQRSAPSRATALVGTGAPGHPQASPGAASAENG----GTHLPPAKVLLSDKKPTPQRVI 377
>gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
Length = 1004
Score = 26.9 bits (58), Expect = 6.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 124 GSGSGWESHLLLGTSGWVLLACRLF 148
GSG+GWE LL ++ L C F
Sbjct: 936 GSGAGWEGTALLHHGSYIKLGCLQF 960
>gi|169210237 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 26.6 bits (57), Expect = 8.2
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 70 GTSGHSSMEPGAAPAHGGH--LPSGGTRPH 97
G S +S G P+ G PSGG RPH
Sbjct: 131 GKSSEASRRNGTGPSTAGRSGAPSGGCRPH 160
>gi|169168737 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 26.6 bits (57), Expect = 8.2
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 70 GTSGHSSMEPGAAPAHGGH--LPSGGTRPH 97
G S +S G P+ G PSGG RPH
Sbjct: 131 GKSSEASRRNGTGPSTAGRSGAPSGGCRPH 160
>gi|169210128 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 26.6 bits (57), Expect = 8.2
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 70 GTSGHSSMEPGAAPAHGGH--LPSGGTRPH 97
G S +S G P+ G PSGG RPH
Sbjct: 131 GKSSEASRRNGTGPSTAGRSGAPSGGCRPH 160
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 26.6 bits (57), Expect = 8.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 81 AAPAHGGHLPSGGTRPHARCFTSDQQTRAQQKVTAQTLLSGREGSGSG 128
++ A G PSGG+ P + Q+ A A L R G G G
Sbjct: 371 SSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGGGGGG 418
>gi|41349460 PR domain containing 10 isoform 2 [Homo sapiens]
Length = 1156
Score = 26.6 bits (57), Expect = 8.2
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 49 GSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTR 108
G P+ T QV +L S E + GG P A + D QT
Sbjct: 1074 GVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQ----VEPPAHSDSLDPQTN 1129
Query: 109 AQQKVTAQTLLSGREGSGSGWESHL 133
+QQ+ T + + G+GS E H+
Sbjct: 1130 SQQQTTQYIITTTTNGNGSS-EVHI 1153
>gi|41349464 PR domain containing 10 isoform 4 [Homo sapiens]
Length = 1023
Score = 26.6 bits (57), Expect = 8.2
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 49 GSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTR 108
G P+ T QV +L S E + GG P A + D QT
Sbjct: 941 GVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQ----VEPPAHSDSLDPQTN 996
Query: 109 AQQKVTAQTLLSGREGSGSGWESHL 133
+QQ+ T + + G+GS E H+
Sbjct: 997 SQQQTTQYIITTTTNGNGSS-EVHI 1020
>gi|41349458 PR domain containing 10 isoform 1 [Homo sapiens]
Length = 1160
Score = 26.6 bits (57), Expect = 8.2
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 49 GSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTR 108
G P+ T QV +L S E + GG P A + D QT
Sbjct: 1078 GVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQ----VEPPAHSDSLDPQTN 1133
Query: 109 AQQKVTAQTLLSGREGSGSGWESHL 133
+QQ+ T + + G+GS E H+
Sbjct: 1134 SQQQTTQYIITTTTNGNGSS-EVHI 1157
>gi|41349462 PR domain containing 10 isoform 3 [Homo sapiens]
Length = 1061
Score = 26.6 bits (57), Expect = 8.2
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Query: 49 GSTWPLATAQVLRSERREGILGTSGHSSMEPGAAPAHGGHLPSGGTRPHARCFTSDQQTR 108
G P+ T QV +L S E + GG P A + D QT
Sbjct: 979 GVATPVTTGQVKAVTSGHYVLSESQSELEEKQTSALSGGVQ----VEPPAHSDSLDPQTN 1034
Query: 109 AQQKVTAQTLLSGREGSGSGWESHL 133
+QQ+ T + + G+GS E H+
Sbjct: 1035 SQQQTTQYIITTTTNGNGSS-EVHI 1058
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,354,181
Number of Sequences: 37866
Number of extensions: 279744
Number of successful extensions: 936
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 923
Number of HSP's gapped (non-prelim): 33
length of query: 148
length of database: 18,247,518
effective HSP length: 93
effective length of query: 55
effective length of database: 14,725,980
effective search space: 809928900
effective search space used: 809928900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.