LOC100293655 23004

Name: LOC100293655	Sequence: fasta or formatted (302aa)		NCBI GI: 239756904
Description: PREDICTED: similar to SNRNP200 protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 19 2 C cysteine 1.0 3 1 D aspartate 6.6 20 1 E glutamate 7.9 24 3 F phenylalanine 4.0 12 1 G glycine 4.6 14 2 H histidine 2.3 7 2 I isoleucine 5.3 16 1 K lysine 7.3 22 1 L leucine 9.6 29 3 M methionine 3.3 10 1 N asparagine 3.3 10 2 P proline 4.0 12 1 Q glutamine 6.0 18 2 R arginine 4.3 13 1 S serine 8.6 26 2 T threonine 5.3 16 1 V valine 7.0 21 2 W tryptophan 1.3 4 2 Y tyrosine 2.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to SNRNP200 protein SNRNP200 0.823 activating signal cointegrator 1 complex subunit 3-l... LOC100289243 0.812 PREDICTED: hypothetical protein XP_002343618 LOC652147 0.776 PREDICTED: similar to U5 snRNP-specific 200kD prote... ASCC3 0.125 activating signal cointegrator 1 complex subunit 3 i... SEC63 0.077 SEC63-like protein IMPDH2 0.010 inosine monophosphate dehydrogenase 2 TTN 0.009 titin isoform N2-A GRIPAP1 0.009 GRIP1 associated protein 1 isoform 2 GBP3 0.009 guanylate binding protein 3 GBP1 0.007 guanylate binding protein 1, interferon-inducible, ... SYNE1 0.005 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.005 spectrin repeat containing, nuclear envelope 1 isof... BOD1L 0.005 biorientation of chromosomes in cell division 1-like... MXD1 0.005 MAX dimerization protein 1 STAG1 0.005 stromal antigen 1 IGFALS 0.005 insulin-like growth factor binding protein, acid la... IGFALS 0.005 insulin-like growth factor binding protein, acid labi... ANKHD1 0.005 ankyrin repeat and KH domain containing 1 isoform 1 ... ANKHD1-EIF4EBP3 0.005 ANKHD1-EIF4EBP3 protein BAZ2B 0.005 bromodomain adjacent to zinc finger domain, 2B [Homo... ANKRD17 0.005 ankyrin repeat domain protein 17 isoform a ANKRD17 0.005 ankyrin repeat domain protein 17 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.