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Search of human proteins with 11995472
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11995472 Ras-related GTP binding C [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11995472 Ras-related GTP binding C [Homo sapiens] 802 0.0
gi|11034847 Ras-related GTP binding D [Homo sapiens] 600 e-172
gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens] 80 3e-15
gi|5729999 Ras-related GTP binding A [Homo sapiens] 79 7e-15
gi|46249397 Ras-related GTP binding B long isoform [Homo sapiens] 72 7e-13
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 37 0.031
gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens] 36 0.054
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 35 0.092
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 35 0.092
gi|4502211 ADP-ribosylation factor 6 [Homo sapiens] 35 0.12
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 35 0.12
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 35 0.12
gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens] 35 0.16
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 35 0.16
gi|7710121 engrailed homeobox 2 [Homo sapiens] 35 0.16
gi|13994190 frizzled 8 [Homo sapiens] 35 0.16
gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens] 35 0.16
gi|229577180 MPN domain containing isoform 2 [Homo sapiens] 34 0.20
gi|31542699 MPN domain containing isoform 1 [Homo sapiens] 34 0.20
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 34 0.20
gi|66879664 ADP-ribosylation factor 1 [Homo sapiens] 34 0.20
gi|66879662 ADP-ribosylation factor 1 [Homo sapiens] 34 0.20
gi|66879660 ADP-ribosylation factor 1 [Homo sapiens] 34 0.20
gi|4502201 ADP-ribosylation factor 1 [Homo sapiens] 34 0.20
gi|4502203 ADP-ribosylation factor 3 [Homo sapiens] 34 0.20
gi|5174607 NGFI-A binding protein 2 [Homo sapiens] 34 0.20
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 34 0.27
gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens] 34 0.27
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 34 0.27
gi|34486092 adenylate cyclase 5 [Homo sapiens] 34 0.27
>gi|11995472 Ras-related GTP binding C [Homo sapiens]
Length = 399
Score = 802 bits (2072), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS 60
MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS
Sbjct: 1 MSLQYGAEETPLAGSYGAADSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS 60
Query: 61 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ 120
KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ
Sbjct: 61 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ 120
Query: 121 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV 180
MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV
Sbjct: 121 MDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKV 180
Query: 181 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL 240
DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL
Sbjct: 181 DGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQL 240
Query: 241 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG 300
PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG
Sbjct: 241 PTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYG 300
Query: 301 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR 360
LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR
Sbjct: 301 LKEDGSGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFR 360
Query: 361 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI 399
KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI
Sbjct: 361 KAIHEVFEVGVTSHRSCGHQTSASSLKALTHNGTPRNAI 399
>gi|11034847 Ras-related GTP binding D [Homo sapiens]
Length = 400
Score = 600 bits (1546), Expect = e-172
Identities = 308/388 (79%), Positives = 329/388 (84%), Gaps = 14/388 (3%)
Query: 23 PKDFGYGVEEEEEEAAAAGGGVGAGAGG-------GCGPGGADSS-------KPRILLMG 68
P+D EEEEE+ G G G G D S KPRILLMG
Sbjct: 10 PQDEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTEEGVLDFSDPFSTEVKPRILLMG 69
Query: 69 LRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTF 128
LRRSGKSSIQKVVFHKMSPNETLFLESTNKI ++D+SNSSFVNFQIWDFPGQ+DFFDPTF
Sbjct: 70 LRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQIDFFDPTF 129
Query: 129 DYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHK 188
DYEMIFRGTGALI+VID+QDDYMEAL RLH+TV++AYKVN D+NFEVFIHKVDGLSDDHK
Sbjct: 130 DYEMIFRGTGALIFVIDSQDDYMEALARLHLTVTRAYKVNTDINFEVFIHKVDGLSDDHK 189
Query: 189 IETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN 248
IETQRDIHQRANDDLADAGLEK+HLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN
Sbjct: 190 IETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN 249
Query: 249 IFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGSGS 308
IFISNSGIEKAFLFDVVSKIYIATDS+PVDMQ+YELCCDMIDVVID+SCIYGLKEDG+G+
Sbjct: 250 IFISNSGIEKAFLFDVVSKIYIATDSTPVDMQTYELCCDMIDVVIDISCIYGLKEDGAGT 309
Query: 309 AYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFE 368
YDKES AIIKLNNTTVLYLKEVTKFLALVC +REESFERKGLIDYNFHCFRKAIHEVFE
Sbjct: 310 PYDKESTAIIKLNNTTVLYLKEVTKFLALVCFVREESFERKGLIDYNFHCFRKAIHEVFE 369
Query: 369 VGVTSHRSCGHQTSASSLKALTHNGTPR 396
V + +S Q K T NGTPR
Sbjct: 370 VRMKVVKSRKVQNRLQKKKRATPNGTPR 397
>gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens]
Length = 346
Score = 80.1 bits (196), Expect = 3e-15
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 61 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ 120
K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ
Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 99
Query: 121 MDFFDPTFDYEM--IFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN-PDMNFEVFI 177
F + F + IFR LIYV D + +E + + +A N PD +
Sbjct: 100 DTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLV 159
Query: 178 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLI 237
HK+D + +D QRD+ + ++ L S + TSI+D ++++A+S +V +LI
Sbjct: 160 HKMDLVQED-----QRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQLI 214
Query: 238 PQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIA 271
P + LE L F ++ LF+ + + I+
Sbjct: 215 PNVQQLEMNLRNFAEIIEADEVLLFERATFLVIS 248
>gi|5729999 Ras-related GTP binding A [Homo sapiens]
Length = 313
Score = 79.0 bits (193), Expect = 7e-15
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 61 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQ 120
K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ
Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66
Query: 121 MDFFDPTF--DYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVN-PDMNFEVFI 177
F + F + IFR LIYV D + +E + + +A N PD +
Sbjct: 67 DTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLV 126
Query: 178 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLI 237
HK+D + +D QRD+ + ++ L + + TSI+D ++++A+S +V +LI
Sbjct: 127 HKMDLVQED-----QRDLIFKEREEDLRRLSRPLECACFRTSIWDETLYKAWSSIVYQLI 181
Query: 238 PQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIA 271
P + LE L F ++ LF+ + + I+
Sbjct: 182 PNVQQLEMNLRNFAQIIEADEVLLFERATFLVIS 215
>gi|46249397 Ras-related GTP binding B long isoform [Homo sapiens]
Length = 374
Score = 72.4 bits (176), Expect = 7e-13
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Query: 61 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLEST--NKIYKDDISNS----------- 107
K ++LLMG SGK+S++ ++F +T L +T ++I+ I++S
Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVG 99
Query: 108 ---------SFVNF------QIWDFPGQMDFFDPTFDYEM--IFRGTGALIYVIDAQDDY 150
S V F +WD GQ F + F + IFR LIYV D +
Sbjct: 100 NTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE 159
Query: 151 MEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLE 209
+E + + +A N PD +HK+D + +D QRD+ + ++
Sbjct: 160 LEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRLSR 214
Query: 210 KLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIY 269
L S + TSI+D ++++A+S +V +LIP + LE L F ++ LF+ + +
Sbjct: 215 PLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFLV 274
Query: 270 IA 271
I+
Sbjct: 275 IS 276
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 37.0 bits (84), Expect = 0.031
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 39/236 (16%)
Query: 35 EEAAAAGGGVGAGAGGGCGPGGADSSKP--------RILLMGLRRSGKSSIQKVVFHKMS 86
+ A GGG+GAG+ G G +P +++++G R GK+S+ +
Sbjct: 8 QRRAGGGGGLGAGSPALSGGQGRRRKQPPRPADFKLQVIIIGSRGVGKTSLMERF----- 62
Query: 87 PNETLFLESTNKIYKDDIS------NSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGAL 140
+ F E+ D + QIWD GQ F T Y +R +
Sbjct: 63 -TDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAY---YRSAKGI 118
Query: 141 IYVID-AQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRA 199
I V D + + + L + + K + D + +K+D ET R+I ++
Sbjct: 119 ILVYDITKKETFDDLPKWMKMIDK--YASEDAELLLVGNKLD-------CETDREITRQQ 169
Query: 200 NDDLADAGLEKLHLSFYLTSIYDH-SIFEAFSKVVQKLIPQLPTLENLLNIFISNS 254
+ A + + F S D+ ++ E F K+V ++ ++P ++L +SNS
Sbjct: 170 GEKFAQ---QITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPL--DILRNELSNS 220
>gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]
Length = 182
Score = 36.2 bits (82), Expect = 0.054
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 57 ADSSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWD 116
A + RILL+GL +GK+++ K +++ + + T + + F +WD
Sbjct: 13 APDQEVRILLLGLDNAGKTTLLK----QLASEDISHITPTQGFNIKSVQSQGF-KLNVWD 67
Query: 117 FPGQMDFFDPTFDYEMIFRGTGALIYVIDAQD 148
GQ +Y F T LIYVID+ D
Sbjct: 68 IGGQRKIRPYWKNY---FENTDILIYVIDSAD 96
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 35.4 bits (80), Expect = 0.092
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Query: 46 AGAGGGCGPGGADSSKP----RILLMGLRRSGKSSIQ----KVVFHKMSPNETLFLESTN 97
AG GG P G + +++L+G GKSS+ K FH+ + T
Sbjct: 2 AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61
Query: 98 KIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVID 145
+ DD + V F+IWD GQ + M +RG A I V D
Sbjct: 62 TVCLDDTT----VKFEIWDTAGQERYHSLA---PMYYRGAQAAIVVYD 102
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 35.4 bits (80), Expect = 0.092
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Query: 46 AGAGGGCGPGGADSSKP----RILLMGLRRSGKSSIQ----KVVFHKMSPNETLFLESTN 97
AG GG P G + +++L+G GKSS+ K FH+ + T
Sbjct: 2 AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61
Query: 98 KIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVID 145
+ DD + V F+IWD GQ + M +RG A I V D
Sbjct: 62 TVCLDDTT----VKFEIWDTAGQERYHSLA---PMYYRGAQAAIVVYD 102
>gi|4502211 ADP-ribosylation factor 6 [Homo sapiens]
Length = 175
Score = 35.0 bits (79), Expect = 0.12
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 63 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMD 122
RIL++GL +GK++I +K+ +++ T + ++ + V F +WD GQ D
Sbjct: 15 RILMLGLDAAGKTTI----LYKLKLGQSVTTIPTVGFNVETVTYKN-VKFNVWDVGGQ-D 68
Query: 123 FFDPTFDYEMIFRGTGALIYVIDA--QDDYMEALTRLH 158
P + + + GT LI+V+D +D EA LH
Sbjct: 69 KIRPLWRH--YYTGTQGLIFVVDCADRDRIDEARQELH 104
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 35.0 bits (79), Expect = 0.12
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 6 GAEETPLAGSYGAADSFPKDFG-YGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS-KPR 63
G P AG+ GAA S G G A+A GGG G G GGG G GA + P
Sbjct: 190 GHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPH 249
Query: 64 ILLMGLRRSGKSSIQKVV 81
GL + S +++V
Sbjct: 250 HAAGGLHFDDRFSDEQLV 267
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 35.0 bits (79), Expect = 0.12
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 6 GAEETPLAGSYGAADSFPKDFG-YGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS-KPR 63
G P AG+ GAA S G G A+A GGG G G GGG G GA + P
Sbjct: 190 GHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHPH 249
Query: 64 ILLMGLRRSGKSSIQKVV 81
GL + S +++V
Sbjct: 250 HAAGGLHFDDRFSDEQLV 267
>gi|19923979 ADP-ribosylation factor-like 11 [Homo sapiens]
Length = 196
Score = 34.7 bits (78), Expect = 0.16
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 60 SKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPG 119
++ ++++MGL +GK+++ +K+ ++ + T + + V+ +WD G
Sbjct: 11 AEAQVVMMGLDSAGKTTL----LYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGG 66
Query: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQDD 149
Q DY GT L+YV+D+ D+
Sbjct: 67 QAPLRASWKDY---LEGTDILVYVLDSTDE 93
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 34.7 bits (78), Expect = 0.16
Identities = 41/147 (27%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 50 GGCGPGGADSSKPRILLMGLRRSGKSSI----QKVVFHKMSPNETLFLESTNKIYKDDIS 105
GG GP D + +L+G GK+S+ + F S + T+ + TNK+ D
Sbjct: 11 GGAGPDFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVD-- 68
Query: 106 NSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVID-----AQDDYMEALTRLHIT 160
V QIWD GQ F T Y +R AL+ + D + D+ LT +H
Sbjct: 69 -GVRVKLQIWDTAGQERFRSVTHAY---YRDAQALLLLYDITNKSSFDNIRAWLTEIHEY 124
Query: 161 VSKAYKV-----NPDMNFEVFIHKVDG 182
+ + DM+ E I DG
Sbjct: 125 AQRDVVIMLLGNKADMSSERVIRSEDG 151
>gi|7710121 engrailed homeobox 2 [Homo sapiens]
Length = 333
Score = 34.7 bits (78), Expect = 0.16
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 20 DSFPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSSKPRILLM 67
D P + VE + + ++ GGG +G GGG PG AD+ + R L++
Sbjct: 5 DPKPGEAAAAVEGQRQPESSPGGG--SGGGGGSSPGEADTGRRRALML 50
Score = 28.9 bits (63), Expect = 8.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 38 AAAGGGVGAGAGGGCGPGGAD 58
A AGGG G GAGG G GA+
Sbjct: 90 AGAGGGRGGGAGGEGGASGAE 110
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 34.7 bits (78), Expect = 0.16
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 37 AAAAGGGVGAGAGGGCGPGG 56
A AAGGG G G GGG GPGG
Sbjct: 635 ATAAGGGGGPGGGGGGGPGG 654
Score = 33.5 bits (75), Expect = 0.35
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 41 GGGVGAGAGGGCGPGGADSSKPRILLMGLR-RSGKSSIQKVVFHKMSP 87
GGG G G GGG GPGG S + GL RSG +S V + K P
Sbjct: 645 GGGGGGGPGGGGGPGGGGGSLYSDVSTGLTWRSGTAS--SVSYPKQMP 690
Score = 32.7 bits (73), Expect = 0.59
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 36 EAAAAGGGVGA-GAGGGCGPGGADSSKP 62
+ AA GGG GA AGGG GPGG P
Sbjct: 625 KGAAVGGGAGATAAGGGGGPGGGGGGGP 652
>gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.16
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 64 ILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN--KIYKDDISNSSFVNFQIWDFPGQM 121
+ L+GL+ SGK++ V+ + + N K+ K +++ +IWD GQ
Sbjct: 23 LTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVT------IKIWDIGGQP 76
Query: 122 DFFDPTFDYEMIFRGTGALIYVIDAQD 148
F +E RG A++Y+IDA D
Sbjct: 77 RFRSM---WERYCRGVNAIVYMIDAAD 100
>gi|229577180 MPN domain containing isoform 2 [Homo sapiens]
Length = 451
Score = 34.3 bits (77), Expect = 0.20
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 17/68 (25%)
Query: 7 AEETPLAGSYGAADSFPKDFGYGVEEEEEE-----------------AAAAGGGVGAGAG 49
A PL+ + GA + P++ E E+ E + GGG GAGAG
Sbjct: 2 AAPEPLSPAGGAGEEAPEEDEDEAEAEDPERPNAGAGGGRSGGGGSSVSGGGGGGGAGAG 61
Query: 50 GGCGPGGA 57
G GPGGA
Sbjct: 62 GCGGPGGA 69
>gi|31542699 MPN domain containing isoform 1 [Homo sapiens]
Length = 471
Score = 34.3 bits (77), Expect = 0.20
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 17/68 (25%)
Query: 7 AEETPLAGSYGAADSFPKDFGYGVEEEEEE-----------------AAAAGGGVGAGAG 49
A PL+ + GA + P++ E E+ E + GGG GAGAG
Sbjct: 2 AAPEPLSPAGGAGEEAPEEDEDEAEAEDPERPNAGAGGGRSGGGGSSVSGGGGGGGAGAG 61
Query: 50 GGCGPGGA 57
G GPGGA
Sbjct: 62 GCGGPGGA 69
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 34.3 bits (77), Expect = 0.20
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 25/201 (12%)
Query: 50 GGCGPGGADSSKP----RILLMGLRRSGKSSIQ----KVVFHKMSPNETLFLESTNKIYK 101
G P G ++ +++L+G GKSS+ K FH+ + T +
Sbjct: 5 GATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCL 64
Query: 102 DDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITV 161
DD + V F+IWD GQ + M +RG A I V D ++ E+ R V
Sbjct: 65 DDTT----VKFEIWDTAGQERYHSLA---PMYYRGAQAAIVVYDITNE--ESFARAKNWV 115
Query: 162 SKAYK-VNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSI 220
+ + +P++ + +K D + +R + + AD + TS+
Sbjct: 116 KELQRQASPNIVIALSGNKAD-------LANKRAVDFQEAQSYADDNSLLFMETSAKTSM 168
Query: 221 YDHSIFEAFSKVVQKLIPQLP 241
+ IF A +K + K PQ P
Sbjct: 169 NVNEIFMAIAKKLPKNEPQNP 189
>gi|66879664 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 34.3 bits (77), Expect = 0.20
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 63 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMD 122
RIL++GL +GK++I +K+ E + T + + + ++F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 123 FFDPTFDYEMIFRGTGALIYVIDAQD 148
P + + F+ T LI+V+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>gi|66879662 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 34.3 bits (77), Expect = 0.20
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 63 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMD 122
RIL++GL +GK++I +K+ E + T + + + ++F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 123 FFDPTFDYEMIFRGTGALIYVIDAQD 148
P + + F+ T LI+V+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>gi|66879660 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 34.3 bits (77), Expect = 0.20
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 63 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMD 122
RIL++GL +GK++I +K+ E + T + + + ++F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 123 FFDPTFDYEMIFRGTGALIYVIDAQD 148
P + + F+ T LI+V+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>gi|4502201 ADP-ribosylation factor 1 [Homo sapiens]
Length = 181
Score = 34.3 bits (77), Expect = 0.20
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 63 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMD 122
RIL++GL +GK++I +K+ E + T + + + ++F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 123 FFDPTFDYEMIFRGTGALIYVIDAQD 148
P + + F+ T LI+V+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>gi|4502203 ADP-ribosylation factor 3 [Homo sapiens]
Length = 181
Score = 34.3 bits (77), Expect = 0.20
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 63 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMD 122
RIL++GL +GK++I +K+ E + T + + + ++F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 123 FFDPTFDYEMIFRGTGALIYVIDAQD 148
P + + F+ T LI+V+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>gi|5174607 NGFI-A binding protein 2 [Homo sapiens]
Length = 525
Score = 34.3 bits (77), Expect = 0.20
Identities = 31/82 (37%), Positives = 39/82 (47%), Gaps = 18/82 (21%)
Query: 3 LQYGAEETPLAGSYGAAD-------SFPK-DFGYGVEEEEEE---AAAAGGGVGAGAG-- 49
L+ G + +PL G GA D S P+ D G G EEE + AGGGV G G
Sbjct: 164 LELGEKLSPLPGGPGAGDPRIWPGRSTPESDVGAGGEEEAGSPPFSPPAGGGVPEGTGAG 223
Query: 50 ----GGCGPGGADSSKPRILLM 67
GG G GG D +P ++ M
Sbjct: 224 GLAAGGTG-GGPDRLEPEMVRM 244
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 33.9 bits (76), Expect = 0.27
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 38 AAAGGGVGAGAGGGCGPGGA 57
AA GG GAGAG GCG GG+
Sbjct: 18 AAGGGAGGAGAGAGCGSGGS 37
>gi|38787904 BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 33.9 bits (76), Expect = 0.27
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 38 AAAGGGVGAGAGGGCGPGGA 57
AA GG GAGAG GCG GG+
Sbjct: 18 AAGGGAGGAGAGAGCGSGGS 37
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 33.9 bits (76), Expect = 0.27
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 5 YGAEETPLAGSYGAADS--FPKDFGYGVEEEEEEAAAAGGGVGAGAGGGCGPGGADSS 60
Y ++ + G YGA S P + GGG G G GGG G GG D S
Sbjct: 34 YREAQSLVQGDYGALQSNGHPLSHAHQWITALSHGGGGGGGGGGGGGGGGGGGGGDGS 91
>gi|34486092 adenylate cyclase 5 [Homo sapiens]
Length = 1261
Score = 33.9 bits (76), Expect = 0.27
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Query: 6 GAEETPLAGSYGAADSFPKDFGYGVEE--------EEEEAAAAGGGVGAGAGGGCGPGGA 57
G A S G + P+ G+EE +E EA A GG G+G GG G+
Sbjct: 136 GGGSAAAAASAGGTEVRPRSVEVGLEERRGKGRAADELEAGAVEGGEGSGDGGSSADSGS 195
Query: 58 DSSKPRILLMG 68
+ +L +G
Sbjct: 196 GAGPGAVLSLG 206
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,975,132
Number of Sequences: 37866
Number of extensions: 695584
Number of successful extensions: 7307
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 5535
Number of HSP's gapped (non-prelim): 1272
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.