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Search of human proteins with 239756864
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756864 PREDICTED: hypothetical protein [Homo sapiens]
(227 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756864 PREDICTED: hypothetical protein [Homo sapiens] 484 e-137
gi|239751356 PREDICTED: hypothetical protein XP_002347829 [Homo ... 484 e-137
gi|239745867 PREDICTED: hypothetical protein XP_002343607 [Homo ... 484 e-137
gi|7706501 WW domain binding protein 11 [Homo sapiens] 41 0.001
gi|42544123 splicing factor 1 isoform 3 [Homo sapiens] 40 0.002
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 40 0.002
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 40 0.002
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.005
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 37 0.011
gi|239754993 PREDICTED: hypothetical protein [Homo sapiens] 37 0.014
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 37 0.014
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 37 0.014
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 37 0.018
gi|55956786 spindle assembly associated Sfi1 homolog isoform a [... 36 0.024
gi|55956784 spindle assembly associated Sfi1 homolog isoform b [... 36 0.024
gi|188536004 zinc finger protein 469 [Homo sapiens] 36 0.031
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 35 0.040
gi|38787970 tensin like C1 domain containing phosphatase isoform... 35 0.040
gi|38787957 tensin like C1 domain containing phosphatase isoform... 35 0.040
gi|38787941 tensin like C1 domain containing phosphatase isoform... 35 0.040
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 35 0.040
gi|153792074 proline rich 12 [Homo sapiens] 35 0.040
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens] 35 0.069
gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo ... 35 0.069
gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1... 35 0.069
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 35 0.069
gi|40254834 kinesin family member 1C [Homo sapiens] 35 0.069
gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 34 0.090
gi|77681565 NG5 protein [Homo sapiens] 34 0.090
gi|156416026 zinc finger protein 219 [Homo sapiens] 34 0.090
>gi|239756864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 227
Score = 484 bits (1245), Expect = e-137
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL
Sbjct: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
Query: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA
Sbjct: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
Query: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL
Sbjct: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
Query: 181 RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA 227
RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA
Sbjct: 181 RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA 227
>gi|239751356 PREDICTED: hypothetical protein XP_002347829 [Homo
sapiens]
Length = 227
Score = 484 bits (1245), Expect = e-137
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL
Sbjct: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
Query: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA
Sbjct: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
Query: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL
Sbjct: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
Query: 181 RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA 227
RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA
Sbjct: 181 RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA 227
>gi|239745867 PREDICTED: hypothetical protein XP_002343607 [Homo
sapiens]
Length = 227
Score = 484 bits (1245), Expect = e-137
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL
Sbjct: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
Query: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA
Sbjct: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
Query: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL
Sbjct: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
Query: 181 RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA 227
RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA
Sbjct: 181 RPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRRPFEA 227
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 40.8 bits (94), Expect = 0.001
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 78 PLPRLQAWESAGGHSGGPAPTGSPG--PSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTL 135
PLPRL G GP P PG P PPR P +P + PR P + P L
Sbjct: 453 PLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPR-PGMMRPPL 511
Query: 136 LSPPVLYSPHPLFLQDPSSVPGATSS 161
+ PP+ +P LF P PG S+
Sbjct: 512 V-PPLGPAPPGLFPPAPLPNPGVLSA 536
Score = 27.7 bits (60), Expect = 8.4
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
Query: 78 PLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLS 137
P ++QA G GP P P PP P +P LR P P L P
Sbjct: 398 PPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPL--- 454
Query: 138 PPVLYSPHPLFLQDPSSVPG 157
P L P P + P PG
Sbjct: 455 -PRLLPPGPPPGRPPGPPPG 473
>gi|42544123 splicing factor 1 isoform 3 [Homo sapiens]
Length = 548
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 29/122 (23%)
Query: 14 EHGESGLDDAIWGEAGLSITLATAQPRGAAY-----PHTCKRRARKTPPWLLDA---RRT 65
E GE+ + ++ +G + T + PR AA P + + PPW+ R
Sbjct: 319 ELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRP 378
Query: 66 HHGRVCGNGGA---------HPLPRLQAWESAGGHSGGPA---PTGSPGPSEQSWDRPPR 113
+HG G G HPLP L GGH G P P G P P W +PP
Sbjct: 379 YHGMHGGGPGGPGGGPHSFPHPLPSL-----TGGHGGHPMQHNPNGPPPP----WMQPPP 429
Query: 114 YP 115
P
Sbjct: 430 PP 431
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 29/122 (23%)
Query: 14 EHGESGLDDAIWGEAGLSITLATAQPRGAAY-----PHTCKRRARKTPPWLLDA---RRT 65
E GE+ + ++ +G + T + PR AA P + + PPW+ R
Sbjct: 319 ELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRP 378
Query: 66 HHGRVCGNGGA---------HPLPRLQAWESAGGHSGGPA---PTGSPGPSEQSWDRPPR 113
+HG G G HPLP L GGH G P P G P P W +PP
Sbjct: 379 YHGMHGGGPGGPGGGPHSFPHPLPSL-----TGGHGGHPMQHNPNGPPPP----WMQPPP 429
Query: 114 YP 115
P
Sbjct: 430 PP 431
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 40.0 bits (92), Expect = 0.002
Identities = 36/122 (29%), Positives = 48/122 (39%), Gaps = 29/122 (23%)
Query: 14 EHGESGLDDAIWGEAGLSITLATAQPRGAAY-----PHTCKRRARKTPPWLLDA---RRT 65
E GE+ + ++ +G + T + PR AA P + + PPW+ R
Sbjct: 319 ELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRP 378
Query: 66 HHGRVCGNGGA---------HPLPRLQAWESAGGHSGGPA---PTGSPGPSEQSWDRPPR 113
+HG G G HPLP L GGH G P P G P P W +PP
Sbjct: 379 YHGMHGGGPGGPGGGPHSFPHPLPSL-----TGGHGGHPMQHNPNGPPPP----WMQPPP 429
Query: 114 YP 115
P
Sbjct: 430 PP 431
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 38.5 bits (88), Expect = 0.005
Identities = 36/124 (29%), Positives = 46/124 (37%), Gaps = 13/124 (10%)
Query: 72 GNGGAH----PLPRLQAWESAG------GHSGGPAPTGSPGPSEQSWDRPPRY-PTKSPA 120
G GG H P P + ++ G G SG P P P +Q PP+ P + P
Sbjct: 24 GRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPP 83
Query: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSS--ASGQGRPIGRRLSGDLE 178
+ P +P PP S P+ Q P PG S+ AS P SG
Sbjct: 84 PHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPP 143
Query: 179 GLRP 182
G P
Sbjct: 144 GSGP 147
Score = 33.9 bits (76), Expect = 0.12
Identities = 40/151 (26%), Positives = 56/151 (37%), Gaps = 30/151 (19%)
Query: 45 PHTCKRRARKTPPWLLDARRT----HHGRVCGNGGAHPL----PRLQAWESAGGHSGGPA 96
PH + ++ PP D+ + G G G A P P S GP
Sbjct: 89 PHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPG 148
Query: 97 PTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVP 156
PT +P P+ S PP P +P + +P +PP P P P++VP
Sbjct: 149 PTPTPPPAVTS--APPGAPPPTPPSSGVP----------TTPPQAGGPPP----PPAAVP 192
Query: 157 G---ATSSASGQGRPIGRRLSGDLEGLRPRG 184
G G G P G ++ G G +P G
Sbjct: 193 GPGPGPKQGPGPGGPKGGKMPG---GPKPGG 220
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 37.4 bits (85), Expect = 0.011
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 13/75 (17%)
Query: 95 PAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSS 154
PAP P P+ PP PT PA F PT + P +P P+F P+
Sbjct: 350 PAPPSVPMPTPTPSSGPPSTPTLIPA----------FAPTPVPAP---TPAPIFTPAPTP 396
Query: 155 VPGATSSASGQGRPI 169
+P AT +A PI
Sbjct: 397 MPAATPAAIPTSAPI 411
>gi|239754993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 76 AHPLPRLQ-AWES------AGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYP 128
+H PR Q AW S AG H+G T + P W+R P + P A + P Y
Sbjct: 44 SHRAPRTQRAWSSPLTPSPAGTHAGS---THTSAPPPNFWERTPG--SAQPLAFQKPLYA 98
Query: 129 TLFC-----PTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRP 168
L P+LLSP PL + PS+ P + + + P
Sbjct: 99 YLIFVIGDEPSLLSPFPHTHQSPLAIPSPSASPPPSCAPAPHSHP 143
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 37.0 bits (84), Expect = 0.014
Identities = 37/118 (31%), Positives = 44/118 (37%), Gaps = 37/118 (31%)
Query: 79 LPRLQAWESA--------------------GGHSGGPAP---------TGSPGPSEQSWD 109
LPRL+AW + G GGPAP + SP PS S
Sbjct: 148 LPRLRAWRTGKTVSPQSNSSRPTCARHLTLGTGDGGPAPPPAPSSASSSPSPSPSSSSPS 207
Query: 110 RPPRYPTKSPAALRMPRYPTL--FCPT--LLSPPVLYSPHPLFLQDPSSVPGATSSAS 163
PP P +P A PR+ F PT SPP P P DP G+ S+S
Sbjct: 208 PPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPP----PAPEQKYDPFEPTGSNPSSS 261
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 37.0 bits (84), Expect = 0.014
Identities = 37/122 (30%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 66 HHGRVCGNGGAHP--LPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALR 123
HHG G G P +LQA + GPAP P + S PP+ P P
Sbjct: 1246 HHGHSHGGLGVLPDGQSKLQALHAQYCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQLGS 1305
Query: 124 MPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGLRPR 183
+P P +PPV PH F VPG G+ RR +G P
Sbjct: 1306 IPP------PPASAPPV--GPHRHF-HAHGPVPGPQHYTLGRPGRAPRRGAGGHPQFAPH 1356
Query: 184 GR 185
GR
Sbjct: 1357 GR 1358
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 36.6 bits (83), Expect = 0.018
Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 8/108 (7%)
Query: 81 RLQAW-ESAGGHSGGPAPTGS-----PGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPT 134
R+ +W + AG + P+ GS PGP SW RPPR PAA P
Sbjct: 4 RILSWGDQAGERARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGR 63
Query: 135 LLSPPVLYS--PHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGL 180
P S + + PG SG P GRR + L GL
Sbjct: 64 SGGGPAAQSGGDGGGLPRRAGAEPGGRGGGSGGTMPGGRRAAAWLTGL 111
>gi|55956786 spindle assembly associated Sfi1 homolog isoform a [Homo
sapiens]
Length = 1242
Score = 36.2 bits (82), Expect = 0.024
Identities = 30/109 (27%), Positives = 40/109 (36%), Gaps = 7/109 (6%)
Query: 60 LDARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSP 119
L+ +R R G G A E HS P E + + P+ P +
Sbjct: 972 LETKRPQASRPLGALGRLAAEEPHALELNTAHSARKQPRRPHFLLEPAQSQRPQKPQEHG 1031
Query: 120 AALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRP 168
+ P P+L P L P PH S +PGA SSA G +P
Sbjct: 1032 LGMAQPAAPSLTRPFLAEAPTALVPH-------SPLPGALSSAPGPKQP 1073
>gi|55956784 spindle assembly associated Sfi1 homolog isoform b [Homo
sapiens]
Length = 1211
Score = 36.2 bits (82), Expect = 0.024
Identities = 30/109 (27%), Positives = 40/109 (36%), Gaps = 7/109 (6%)
Query: 60 LDARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSP 119
L+ +R R G G A E HS P E + + P+ P +
Sbjct: 941 LETKRPQASRPLGALGRLAAEEPHALELNTAHSARKQPRRPHFLLEPAQSQRPQKPQEHG 1000
Query: 120 AALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASGQGRP 168
+ P P+L P L P PH S +PGA SSA G +P
Sbjct: 1001 LGMAQPAAPSLTRPFLAEAPTALVPH-------SPLPGALSSAPGPKQP 1042
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 35.8 bits (81), Expect = 0.031
Identities = 44/149 (29%), Positives = 55/149 (36%), Gaps = 16/149 (10%)
Query: 52 ARKTPPWLLDARR-----THHGRVCGNGGAH-PLPRLQAWESAGGHSGGPAPTGSPGPSE 105
+R P L AR T R G G H L + ES+ G P + S
Sbjct: 3744 SRSPAPERLPARAQAKSCTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQVPGPARSESV 3803
Query: 106 QSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSAS-- 163
S+ R P P K P R P+ PT P P P + + PG T
Sbjct: 3804 GSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKPRPPPSEQRKAEPGHTQRKDRL 3863
Query: 164 GQGRPIGRRLSGDLEGLRP--RGRSRNGA 190
G+ P GR L LRP RG + +GA
Sbjct: 3864 GKAFPQGRPL------LRPPKRGTAVHGA 3886
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 35.4 bits (80), Expect = 0.040
Identities = 45/179 (25%), Positives = 59/179 (32%), Gaps = 45/179 (25%)
Query: 1 MAEAGGTETKQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLL 60
+ A G E+++ G +G D WG P G A H +RA P
Sbjct: 28 LGRAAGVESRRRAGEGAAGRRDGGWG------------PPGGAGDHQTLQRASLLPGGSA 75
Query: 61 DARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPA 120
D + + G A P P Q PT P RPP
Sbjct: 76 DKDQEREPSLAARGTAPPAPPRQC-----------LPTPCPPLGHGLRPRPP-------- 116
Query: 121 ALRMPRYPTLFCPTLLSPPVLYSPHPLFLQD---PSSVPGATSSASGQGRP---IGRRL 173
P P CP L+P P LF P+ A +A+ +GRP GRR+
Sbjct: 117 ----PGTPPPRCPRTLAP----GPRGLFPAPPPAPARTGPAGKAAADRGRPGPAAGRRV 167
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 35.4 bits (80), Expect = 0.040
Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 87 SAGGHSGG-----PAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSP-PV 140
S GGHS G P PT PG W + PR P SP + P+ + SP P
Sbjct: 867 SPGGHSDGASPRSPVPTTLPGLRHAPW-QGPRGPPDSPDGSPLTPVPSQMPWLVASPEPP 925
Query: 141 LYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGLRPRGRSRNGACSSAVFH 197
SP P F P + T+ S P R L G + P G + + + + H
Sbjct: 926 QSSPTPAF---PLAASYDTNGLSQPPLPEKRHLPGPGQQPGPWGPEQASSPARGISH 979
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 35.4 bits (80), Expect = 0.040
Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 87 SAGGHSGG-----PAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSP-PV 140
S GGHS G P PT PG W + PR P SP + P+ + SP P
Sbjct: 991 SPGGHSDGASPRSPVPTTLPGLRHAPW-QGPRGPPDSPDGSPLTPVPSQMPWLVASPEPP 1049
Query: 141 LYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGLRPRGRSRNGACSSAVFH 197
SP P F P + T+ S P R L G + P G + + + + H
Sbjct: 1050 QSSPTPAF---PLAASYDTNGLSQPPLPEKRHLPGPGQQPGPWGPEQASSPARGISH 1103
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 35.4 bits (80), Expect = 0.040
Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 87 SAGGHSGG-----PAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSP-PV 140
S GGHS G P PT PG W + PR P SP + P+ + SP P
Sbjct: 1001 SPGGHSDGASPRSPVPTTLPGLRHAPW-QGPRGPPDSPDGSPLTPVPSQMPWLVASPEPP 1059
Query: 141 LYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGLRPRGRSRNGACSSAVFH 197
SP P F P + T+ S P R L G + P G + + + + H
Sbjct: 1060 QSSPTPAF---PLAASYDTNGLSQPPLPEKRHLPGPGQQPGPWGPEQASSPARGISH 1113
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 35.4 bits (80), Expect = 0.040
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 22/130 (16%)
Query: 88 AGGHSGGPAPTGSPGP----------SEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLS 137
AGG P + S GP S Q+ P P+ +PA P T L
Sbjct: 976 AGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPA-------PAPMAATGL- 1027
Query: 138 PPVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGLR--PRGRSRNGAC--SS 193
PP+L + + F + ++ A +++SG G+P G + L GL+ P + AC
Sbjct: 1028 PPLLPAENKAFASNLPTLNVAKAASSGPGKPSGLQYESKLSGLKKPPTLQPSKEACFLEH 1087
Query: 194 AVFHQGARLH 203
HQG+ LH
Sbjct: 1088 LHKHQGSVLH 1097
Score = 27.7 bits (60), Expect = 8.4
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 77 HPLPRLQAWESAGG------HSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTL 130
HP P QA + G G P P +P P+ +PP P P +P P L
Sbjct: 820 HPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHL 879
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 35.4 bits (80), Expect = 0.040
Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 75 GAHPLPRLQAWESAGGHSGG-----PAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPT 129
G PLP L + S G P PT P P+ Q PP P PA +P P
Sbjct: 1432 GPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPP-PPPQPA---LPSPPP 1487
Query: 130 LFCPTLLSPPVLYSPHPLFLQDPSSVP 156
L PT SPP P PL P ++P
Sbjct: 1488 LVAPTPSSPP----PPPLPPPPPPAMP 1510
Score = 28.5 bits (62), Expect = 4.9
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 95 PAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSS 154
P P P P + + PP +P++ P P P + SPP P L P
Sbjct: 1469 PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPE 1528
Query: 155 VPGATS 160
P A S
Sbjct: 1529 EPAAPS 1534
>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 34.7 bits (78), Expect = 0.069
Identities = 41/149 (27%), Positives = 55/149 (36%), Gaps = 33/149 (22%)
Query: 55 TPPWLLDARRTHHGRVCGNGGAHPLPRLQAWESAGGHS---GGPAPTGSPGP-------- 103
+PPW A R + G G +AW AG G PGP
Sbjct: 10 SPPW---AGRPSGCNLVGAGRRCRAWPERAWPQAGDSDCLGQGRRAQRRPGPGVSAVGAS 66
Query: 104 ----SEQSWDRPPRYPTKSP---AALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVP 156
+ +S +RP PT +P +A R P P L P+ P+ +P P P
Sbjct: 67 GQQRAPESNERPAEEPTPAPMPSSAPRGPTEPALRRPSSADRPL--APGPSSSPGAGRAP 124
Query: 157 GATSSASGQGRPIGRRLSGDLEGLRPRGR 185
GA +S SG + G +PRGR
Sbjct: 125 GAMASPSGSSKATG----------KPRGR 143
>gi|239746556 PREDICTED: hypothetical protein XP_002343778 [Homo
sapiens]
Length = 169
Score = 34.7 bits (78), Expect = 0.069
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 89 GGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLF 148
GG GP+ SP +E + PT++P L FCP L S H
Sbjct: 71 GGLRTGPSLRSSPAGAEIA-------PTRTPRWLASAAGSPSFCPRL-------SLH--- 113
Query: 149 LQDPSSVPGATSSASGQGRPIGRRLS--GDLEGLRPRGRSRNGACSSAVFHQG--ARLH 203
+ P A + SG +P R L+ G EGL RG+S +G A +G AR H
Sbjct: 114 -----TSPRAEGAGSGLSQPQRRALTAQGGAEGLLERGQSGHGGRGGAKSERGLLARCH 167
>gi|226817313 SH3 and multiple ankyrin repeat domains 2 isoform 1
[Homo sapiens]
Length = 1849
Score = 34.7 bits (78), Expect = 0.069
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 98 TGSPGPSEQSW--DRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSV 155
T PG S+ RPP Y +++ R P + PT ++ L P PL S
Sbjct: 1679 TVRPGTSQPITLQSRPPDYESRTSGTRRAPS--PVVSPTEMNKETL--PAPLSAATASPS 1734
Query: 156 PGATSSASGQGRPIGRRLSGDLEGLRPRGRSRN 188
P + S +P SGDL GL P GRSR+
Sbjct: 1735 PALSDVFSLPSQPP----SGDLFGLNPAGRSRS 1763
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 34.7 bits (78), Expect = 0.069
Identities = 44/171 (25%), Positives = 53/171 (30%), Gaps = 20/171 (11%)
Query: 72 GNGGAHPLPRLQAWESAGGHSGGPAPTGSP---------------GPSEQSWDRPPRYPT 116
GN GA P + W G G P G P GP+ DR P+ P
Sbjct: 1314 GNPGAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRGEQGFMGNTGPTGAVGDRGPKGPK 1373
Query: 117 KSPAALRMPRYPTLFCPTLLSPP--VLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLS 174
P P T+ P + P + P + Q PGA QG P
Sbjct: 1374 GDPGFPGAP--GTVGAPGIAGIPQKIAVQPGTVGPQGRRGPPGAPGEMGPQGPPGEPGFR 1431
Query: 175 GDLEGLRPRGRSRNGACSSAVFHQGARLHHFP-EQSGLASPTWLPVLPRRP 224
G P+GR A +G H P Q G P LP P
Sbjct: 1432 GAPGKAGPQGRGGVSAVPGFRGDEGPIGHQGPIGQEGAPGRPGSPGLPGMP 1482
Score = 28.9 bits (63), Expect = 3.8
Identities = 41/165 (24%), Positives = 56/165 (33%), Gaps = 45/165 (27%)
Query: 90 GHSGGPAPTGSPGPS-EQSWDRPPRY--PTKSPAALRMPRYPTLFCPTLLSPPVLYSPHP 146
G GGP P G PG + + + PP + P S A+ +P P SP P
Sbjct: 711 GADGGPGPRGLPGDAGREGFPGPPGFIGPRGSKGAVGLP-----------GPD--GSPGP 757
Query: 147 LFLQDP--------------SSVPGATSSASGQGRPIGRRLSGD--------------LE 178
+ L P + PG A G+P + L GD +
Sbjct: 758 IGLPGPDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLPGDRGPPGFRGSQGMPGMP 817
Query: 179 GLRPRGRSRNGACSSAVFHQGARLHHFPEQSGLASPTWLPVLPRR 223
GL+ + G + LH FP G P LP +P R
Sbjct: 818 GLKGQ-PGLPGPSGQPGLYGPPGLHGFPGAPGQEGPLGLPGIPGR 861
Score = 27.7 bits (60), Expect = 8.4
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 72 GNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPS 104
G+ G H LP + G+ G P P G+ G S
Sbjct: 518 GDPGQHGLPGFPGLKGVPGNIGAPGPKGAKGDS 550
Score = 27.7 bits (60), Expect = 8.4
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 72 GNGGAHPLPRLQAWESAGGHSGGPAPTGSPGP 103
G G LP + E G G P TG+PGP
Sbjct: 848 GQEGPLGLPGIPGREGLPGDRGDPGDTGAPGP 879
>gi|40254834 kinesin family member 1C [Homo sapiens]
Length = 1103
Score = 34.7 bits (78), Expect = 0.069
Identities = 33/121 (27%), Positives = 40/121 (33%), Gaps = 20/121 (16%)
Query: 10 KQSQEHGESGLDDAIWGEAGLSITLATAQPRGAAYPHTCKRRARKTPPWLLDARRTHHGR 69
K + +H ES W G QP PH R P RR+HH R
Sbjct: 982 KSNPQHRES------WPGMGSGEAPTPLQPPEEVTPHPATPARRPPSP-----RRSHHPR 1030
Query: 70 VCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPR-YPTKSPAALRMPRYP 128
G S G S P P S+ +PP+ YP + P R P Y
Sbjct: 1031 RNSLDGGG--------RSRGAGSAQPEPQHFQPKKHNSYPQPPQPYPAQRPPGPRYPPYT 1082
Query: 129 T 129
T
Sbjct: 1083 T 1083
Score = 28.5 bits (62), Expect = 4.9
Identities = 42/147 (28%), Positives = 51/147 (34%), Gaps = 18/147 (12%)
Query: 81 RLQAWESAGGHSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALR--MPRYPTLFCPTLLSP 138
RLQ + +GG GG P D R+P KS R P + PT L P
Sbjct: 948 RLQGLQGSGGRGGGLRRP--PARFVPPHDCKLRFPFKSNPQHRESWPGMGSGEAPTPLQP 1005
Query: 139 PVLYSPHPLFLQDPSSVPGATSSASGQGRPIGRRLSGDLEGLRPRGRSRN-GACSSAVFH 197
P +PHP P+ P S P L G GRSR G+ H
Sbjct: 1006 PEEVTPHP---ATPARRP---PSPRRSHHPRRNSLDGG-------GRSRGAGSAQPEPQH 1052
Query: 198 QGARLHHFPEQSGLASPTWLPVLPRRP 224
+ H+ Q P P PR P
Sbjct: 1053 FQPKKHNSYPQPPQPYPAQRPPGPRYP 1079
>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
Length = 1141
Score = 34.3 bits (77), Expect = 0.090
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 31/111 (27%)
Query: 66 HHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSWDR-----------PPRY 114
+ GRV GA PL A E A + P PS+ +DR PP
Sbjct: 1022 YKGRVNSQRGAQPLA--VAKELAAVKAPSP-------PSQSLYDRVHSSALFGAICPPLC 1072
Query: 115 PTKSPAA------LRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGAT 159
P S + L MP P P LL PP++ S L+DP PG+T
Sbjct: 1073 PRSSACSAASGPHLTMPARPPSLPPLLLLPPLIPS-----LRDPQQAPGST 1118
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 34.3 bits (77), Expect = 0.090
Identities = 36/120 (30%), Positives = 40/120 (33%), Gaps = 18/120 (15%)
Query: 56 PPWLLDARRTHHGRVCGNGGAHPLPRLQAWESAGGHSGGPAPTGSPGPSEQSW-DRPPRY 114
PP + HH G LPRL A G A T GPS + RPP +
Sbjct: 33 PPQAAPSSHHHHHHHYHQSGTATLPRLGA-----GGLASSAATAQRGPSSSATLPRPPHH 87
Query: 115 PTKSPAA----------LRMPRYPTLFCPTLLSPPVLYSPHPLFLQDPSSVPGATSSASG 164
PAA RMP P L P L P P P P T+ A G
Sbjct: 88 APPGPAAGAPPPGCATLPRMPPDPYLQETRFEGP--LPPPPPAAAAPPPPAPAQTAQAPG 145
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 34.3 bits (77), Expect = 0.090
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 91 HSGGPAPTGSPGPSEQSWDRPPRYPTKSPAALRMPRYPTLFCPTLLSPPVLYSPHPLFLQ 150
H+ P +PGP+ P R P P L + Y L LL+P +P P +
Sbjct: 324 HASKLGPLRAPGPASG----PARAP--QPPDLGLLAYEPLGPALLLAP----APTPAERR 373
Query: 151 DPSSVPGATSSASGQGRPIGRRLSGDLEGLRP-RGRSRNG 189
+P S+ G S +G+GRP G EG P GRS G
Sbjct: 374 EPPSLLGYLSLRAGEGRPNG-------EGAEPGPGRSFGG 406
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,475,072
Number of Sequences: 37866
Number of extensions: 800839
Number of successful extensions: 6087
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 341
Number of HSP's that attempted gapping in prelim test: 4910
Number of HSP's gapped (non-prelim): 1494
length of query: 227
length of database: 18,247,518
effective HSP length: 99
effective length of query: 128
effective length of database: 14,498,784
effective search space: 1855844352
effective search space used: 1855844352
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.