BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239756435 PREDICTED: hypothetical protein [Homo sapiens] (144 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239756435 PREDICTED: hypothetical protein [Homo sapiens] 295 9e-81 gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo ... 295 9e-81 gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo ... 295 9e-81 gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo ... 282 6e-77 gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo ... 282 6e-77 gi|239756491 PREDICTED: hypothetical protein [Homo sapiens] 280 2e-76 gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo ... 280 2e-76 gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo ... 279 7e-76 gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 33 0.11 gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 31 0.31 gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] 30 0.70 gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens] 30 0.70 gi|222418633 family with sequence similarity 71, member B [Homo ... 30 0.91 gi|83367077 mucin 16 [Homo sapiens] 30 0.91 gi|55743092 aristaless-like homeobox 4 [Homo sapiens] 30 0.91 gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 30 0.91 gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 29 1.6 gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 29 1.6 gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 29 1.6 gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 29 1.6 gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 29 1.6 gi|88758613 CD93 antigen precursor [Homo sapiens] 28 2.0 gi|4503357 docking protein 1 [Homo sapiens] 28 2.7 gi|116284382 G protein-coupled bile acid receptor 1 [Homo sapiens] 28 2.7 gi|116284384 G protein-coupled bile acid receptor 1 [Homo sapiens] 28 2.7 gi|24850109 G protein-coupled bile acid receptor 1 [Homo sapiens] 28 2.7 gi|55750053 atrophin-1 [Homo sapiens] 28 3.5 gi|55750041 atrophin-1 [Homo sapiens] 28 3.5 gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens] 28 3.5 gi|161019170 mucin 5AC [Homo sapiens] 27 4.5 >gi|239756435 PREDICTED: hypothetical protein [Homo sapiens] Length = 144 Score = 295 bits (755), Expect = 9e-81 Identities = 144/144 (100%), Positives = 144/144 (100%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239750968 PREDICTED: hypothetical protein XP_002347619 [Homo sapiens] Length = 144 Score = 295 bits (755), Expect = 9e-81 Identities = 144/144 (100%), Positives = 144/144 (100%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239745374 PREDICTED: hypothetical protein XP_002343449 [Homo sapiens] Length = 144 Score = 295 bits (755), Expect = 9e-81 Identities = 144/144 (100%), Positives = 144/144 (100%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239745437 PREDICTED: hypothetical protein XP_002343466 [Homo sapiens] Length = 144 Score = 282 bits (722), Expect = 6e-77 Identities = 138/144 (95%), Positives = 141/144 (97%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239745420 PREDICTED: hypothetical protein XP_002343461 [Homo sapiens] Length = 144 Score = 282 bits (722), Expect = 6e-77 Identities = 138/144 (95%), Positives = 141/144 (97%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239756491 PREDICTED: hypothetical protein [Homo sapiens] Length = 144 Score = 280 bits (717), Expect = 2e-76 Identities = 137/144 (95%), Positives = 140/144 (97%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSF TVTRA+EYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239745428 PREDICTED: hypothetical protein XP_002343462 [Homo sapiens] Length = 144 Score = 280 bits (717), Expect = 2e-76 Identities = 137/144 (95%), Positives = 140/144 (97%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSF TVTRA+EYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFRTVTRASEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVSPCSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSPCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|239745440 PREDICTED: hypothetical protein XP_002343467 [Homo sapiens] Length = 144 Score = 279 bits (713), Expect = 7e-76 Identities = 137/144 (95%), Positives = 140/144 (97%) Query: 1 MPTTPGVQLRARRCVMRALTHNTELFLHGQNRAALTSFSTVTRANEYSMTCWGSACRSSP 60 MPTTPGVQLRAR CVM ALT NTELFLHGQNRAALTSFSTVTRA+EYSMTCWGSACRSSP Sbjct: 1 MPTTPGVQLRARCCVMWALTRNTELFLHGQNRAALTSFSTVTRASEYSMTCWGSACRSSP 60 Query: 61 GSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 GSTLAVS CSQTVSP+ALPLGSGRVMA+DLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP Sbjct: 61 GSTLAVSRCSQTVSPIALPLGSGRVMARDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAP 120 Query: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 SWSCTTTARPTSKCGLKPGGSTAP Sbjct: 121 SWSCTTTARPTSKCGLKPGGSTAP 144 >gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] Length = 2817 Score = 32.7 bits (73), Expect = 0.11 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 5/114 (4%) Query: 30 QNRAALTSFSTVTRANEYSMTCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKD 89 Q ++LTS T + + M A +SP SP + T P+A + S Sbjct: 2231 QQSSSLTSVPPTTFSLTFKMESARKAWENSPNVREKGSPVTSTAPPIATGVSSSASGPST 2290 Query: 90 LR----AEGGGEQVAV-SGAPSHGLAHLLRATTAAPSWSCTTTARPTSKCGLKP 138 + Q+ V S P+ L+ TT++ S TTT+ P + C +KP Sbjct: 2291 ANYNSFSSASMPQIPVASVTPTASLSGAGTYTTSSLSTKSTTTSDPPNICKVKP 2344 >gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase [Homo sapiens] Length = 1327 Score = 31.2 bits (69), Expect = 0.31 Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 10/69 (14%) Query: 37 SFSTVTRANEYSMTCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGG 96 S S + ++ S T S+ SSPGS+LA SP + VS A PLG G A G G Sbjct: 123 SGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTA-PLGPG--------AAGPG 173 Query: 97 EQV-AVSGA 104 V AVSGA Sbjct: 174 TGVPAVSGA 182 >gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] Length = 296 Score = 30.0 bits (66), Expect = 0.70 Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 81 GSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132 GSG ++ GGG +A+S PS G+ LL AA S S ++++ +S Sbjct: 65 GSGCTLSPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116 >gi|7669554 AMMECR1 protein isoform 1 [Homo sapiens] Length = 333 Score = 30.0 bits (66), Expect = 0.70 Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 81 GSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTS 132 GSG ++ GGG +A+S PS G+ LL AA S S ++++ +S Sbjct: 65 GSGCTLSPPQGCGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASS 116 >gi|222418633 family with sequence similarity 71, member B [Homo sapiens] Length = 605 Score = 29.6 bits (65), Expect = 0.91 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 29 GQNRAALTSFSTVTRANEYSMTCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAK 88 G+N++A ++ + +A++ S + R++PGS V+ + V VA + + AK Sbjct: 516 GKNQSASSTGALQKKASKISSFL--RSLRATPGSKTRVTSHDREVDIVAKMVEKQNIEAK 573 Query: 89 DLRAEGGGEQVAVSG 103 +A+GG E +SG Sbjct: 574 VEKAQGGQELEMISG 588 >gi|83367077 mucin 16 [Homo sapiens] Length = 14507 Score = 29.6 bits (65), Expect = 0.91 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%) Query: 88 KDLRAEGGGEQVAVSGAPSHGLAHLLRATTA----APSWSCTTTARPTSK 133 ++LR G S +HG + +LRATT+ A SW+ +TA+ S+ Sbjct: 481 RELRTTGSTSGRQSSSTAAHGSSDILRATTSSTSKASSWTSESTAQQFSE 530 >gi|55743092 aristaless-like homeobox 4 [Homo sapiens] Length = 411 Score = 29.6 bits (65), Expect = 0.91 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 21/97 (21%) Query: 29 GQNRAALTSFST------VTRANEYSMT---CW---GSACRSSPGSTLAVSPCSQTVSPV 76 GQ + T FST +TRA Y+ W A P + P +SP Sbjct: 276 GQMQQVRTHFSTAYELPLLTRAENYAQIQNPSWLGNNGAASPVPACVVPCDPVPACMSPH 335 Query: 77 ALPLGSGRVMAKDLRAEGGGEQVAVSGAPSH-GLAHL 112 A P GSG D ++VSGA SH G H+ Sbjct: 336 AHPPGSGASSVTDF--------LSVSGAGSHVGQTHM 364 >gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] Length = 1711 Score = 29.6 bits (65), Expect = 0.91 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%) Query: 64 LAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWS 123 +A P + V+PV L L S + L + G + ++ P +HL +T Sbjct: 910 IAAKPYEEQVNPVLLTL-SPQTGTLALSVQPSGGDIRMNQGPEESESHLCSDSTPKMEG- 967 Query: 124 CTTTARPTSKCGLKPGGSTAP 144 P CGLK G T P Sbjct: 968 ------PQGACGLKLAGDTKP 982 >gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] Length = 1662 Score = 28.9 bits (63), Expect = 1.6 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%) Query: 52 WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100 WG+ C S + A C Q A+ GSG ++ D+R G + Sbjct: 910 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 969 Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135 G +H H + AT T W + TTTARP+S CG Sbjct: 970 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1016 >gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] Length = 1788 Score = 28.9 bits (63), Expect = 1.6 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%) Query: 52 WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100 WG+ C S + A C Q A+ GSG ++ D+R G + Sbjct: 1036 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1095 Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135 G +H H + AT T W + TTTARP+S CG Sbjct: 1096 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1142 >gi|148539844 deleted in malignant brain tumors 1 isoform c precursor [Homo sapiens] Length = 2403 Score = 28.9 bits (63), Expect = 1.6 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%) Query: 52 WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100 WG+ C S + A C Q A+ GSG ++ D+R G + Sbjct: 1651 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1710 Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135 G +H H + AT T W + TTTARP+S CG Sbjct: 1711 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1757 >gi|148539842 deleted in malignant brain tumors 1 isoform b precursor [Homo sapiens] Length = 2413 Score = 28.9 bits (63), Expect = 1.6 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%) Query: 52 WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100 WG+ C S + A C Q A+ GSG ++ D+R G + Sbjct: 1661 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1720 Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135 G +H H + AT T W + TTTARP+S CG Sbjct: 1721 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1767 >gi|148539840 deleted in malignant brain tumors 1 isoform a precursor [Homo sapiens] Length = 1785 Score = 28.9 bits (63), Expect = 1.6 Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 23/107 (21%) Query: 52 WGSACRSSPGSTLAVSPCSQTVSPVALPL--------GSGRVMAKDLRAEGGGEQV---A 100 WG+ C S + A C Q A+ GSG ++ D+R G + Sbjct: 1033 WGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGSGPIVLDDVRCSGNESYLWSCP 1092 Query: 101 VSGAPSHGLAH------LLRAT----TAAPSW--SCTTTARPTSKCG 135 G +H H + AT T W + TTTARP+S CG Sbjct: 1093 HKGWLTHNCGHHEDAGVICSATQINSTTTDWWHPTTTTTARPSSNCG 1139 >gi|88758613 CD93 antigen precursor [Homo sapiens] Length = 652 Score = 28.5 bits (62), Expect = 2.0 Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 3/89 (3%) Query: 56 CRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKDL-RAEGGGEQVAVSGAPSHGLAHLLR 114 C PG LA + S T+ PV+L SG +D EG A + +P+ G + Sbjct: 452 CGCLPGWVLAPNGVSCTMGPVSLGPPSGPPDEEDKGEKEGSTVPRAATASPTRGPEGTPK 511 Query: 115 A--TTAAPSWSCTTTARPTSKCGLKPGGS 141 A TT+ PS S L P GS Sbjct: 512 ATPTTSRPSLSSDAPITSAPLKMLAPSGS 540 >gi|4503357 docking protein 1 [Homo sapiens] Length = 481 Score = 28.1 bits (61), Expect = 2.7 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 68 PCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLA--HLLRATTAAPSWSCT 125 P ++ P+ P G + A G SG SH A ++ + A+ SW C Sbjct: 412 PPPRSTKPLLAPKPQGPAFPEPGTATG-------SGIKSHNSALYSQVQKSGASGSWDCG 464 Query: 126 TTARPTSKCGLKPGGST 142 + T K G+K GST Sbjct: 465 LSRVGTDKTGVKSEGST 481 >gi|116284382 G protein-coupled bile acid receptor 1 [Homo sapiens] Length = 330 Score = 28.1 bits (61), Expect = 2.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 52 WGSACRSSPGSTLAVSPCSQT 72 WG A R SPG ++A P SQ+ Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323 >gi|116284384 G protein-coupled bile acid receptor 1 [Homo sapiens] Length = 330 Score = 28.1 bits (61), Expect = 2.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 52 WGSACRSSPGSTLAVSPCSQT 72 WG A R SPG ++A P SQ+ Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323 >gi|24850109 G protein-coupled bile acid receptor 1 [Homo sapiens] Length = 330 Score = 28.1 bits (61), Expect = 2.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 52 WGSACRSSPGSTLAVSPCSQT 72 WG A R SPG ++A P SQ+ Sbjct: 303 WGRASRDSPGPSIAYHPSSQS 323 >gi|55750053 atrophin-1 [Homo sapiens] Length = 1190 Score = 27.7 bits (60), Expect = 3.5 Identities = 20/70 (28%), Positives = 27/70 (38%) Query: 75 PVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKC 134 P P G+G V++ GG + G P+ G H T + S S + A PT Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP 276 Query: 135 GLKPGGSTAP 144 GG P Sbjct: 277 TTPVGGGNLP 286 >gi|55750041 atrophin-1 [Homo sapiens] Length = 1190 Score = 27.7 bits (60), Expect = 3.5 Identities = 20/70 (28%), Positives = 27/70 (38%) Query: 75 PVALPLGSGRVMAKDLRAEGGGEQVAVSGAPSHGLAHLLRATTAAPSWSCTTTARPTSKC 134 P P G+G V++ GG + G P+ G H T + S S + A PT Sbjct: 217 PQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP 276 Query: 135 GLKPGGSTAP 144 GG P Sbjct: 277 TTPVGGGNLP 286 >gi|110224465 phosphatidylinositol glycan, class B [Homo sapiens] Length = 554 Score = 27.7 bits (60), Expect = 3.5 Identities = 10/15 (66%), Positives = 12/15 (80%) Query: 129 RPTSKCGLKPGGSTA 143 RP SKCG++PGG A Sbjct: 3 RPLSKCGMEPGGGDA 17 >gi|161019170 mucin 5AC [Homo sapiens] Length = 6207 Score = 27.3 bits (59), Expect = 4.5 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 31 NRAALTSFSTVTRANEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKD 89 N A T +++ ++ +++ T W SA + G+T P + T A G+ + Sbjct: 4479 NTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPA 4538 Query: 90 LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132 L + + S P H A TA PS + T+T P+S Sbjct: 4539 LSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 4587 Score = 26.9 bits (58), Expect = 5.9 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 31 NRAALTSFSTVTRANEYSM-TCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKD 89 N A T +++ ++ +++ T W SA + G+T P + T A G+ + Sbjct: 3332 NTTATTHGRSLSPSSPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPA 3391 Query: 90 LRAEGGGEQVAVSG------APSHGLAHLLRATTAAPSWSCTTTARPTS 132 L + + S P H A TA PS + T+T P+S Sbjct: 3392 LSSPHPSSRTTESPPSPGTTTPGHTRATSRTTATATPSKTRTSTLLPSS 3440 Score = 26.6 bits (57), Expect = 7.7 Identities = 23/89 (25%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 50 TCWGSACRSSPGSTLAVSPCSQTVSPVALPLGSGRVMAKDLRAEGGGEQVAVSG------ 103 T W SA G+T P + T +A G+ + L + + S Sbjct: 2850 TAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPALSSPHPSSRTTESPPSPGTT 2909 Query: 104 APSHGLAHLLRATTAAPSWSCTTTARPTS 132 P H A TA PS + T+T P+S Sbjct: 2910 TPGHTTATSRTTATATPSKTRTSTLLPSS 2938 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.126 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,231,078 Number of Sequences: 37866 Number of extensions: 269540 Number of successful extensions: 1021 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 982 Number of HSP's gapped (non-prelim): 64 length of query: 144 length of database: 18,247,518 effective HSP length: 92 effective length of query: 52 effective length of database: 14,763,846 effective search space: 767719992 effective search space used: 767719992 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.