Guide to the Human Genome
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Name: GPBAR1 Sequence: fasta or formatted (330aa) NCBI GI: 24850109
Description:

G protein-coupled bile acid receptor 1

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [330aa] G protein-coupled bile acid receptor 1
alt mRNA [330aa] G protein-coupled bile acid receptor 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.9         46           3
 C cysteine            2.1          7           1
 D aspartate           2.1          7           1
 E glutamate           1.8          6           1
 F phenylalanine       2.4          8           2
 G glycine             8.2         27           1
 H histidine           1.2          4           1
 I isoleucine          2.4          8           2
 K lysine              0.3          1           1
 L leucine            20.6         68           3
 M methionine          1.2          4           1
 N asparagine          2.4          8           1
 P proline             8.5         28           2
 Q glutamine           3.6         12           1
 R arginine            6.7         22           2
 S serine              8.5         28           2
 T threonine           3.6         12           1
 V valine              4.2         14           1
 W tryptophan          3.0         10           1
 Y tyrosine            3.0         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled bile acid receptor 1 
GPBAR1                1.000   G protein-coupled bile acid receptor 1 
GPBAR1                1.000   G protein-coupled bile acid receptor 1 
S1PR4                 0.067   sphingosine-1-phosphate receptor 4 precursor 
HRH2                  0.050   histamine receptor H2 isoform 1 
HRH2                  0.050   histamine receptor H2 isoform 2 
ADORA2B               0.049   adenosine A2b receptor 
S1PR5                 0.047   endothelial differentiation, sphingolipid G-protein-...
ADRB3                 0.045   adrenergic, beta-3-, receptor 
LPAR1                 0.038   lysophosphatidic acid receptor 1 
LPAR1                 0.038   lysophosphatidic acid receptor 1 
HTR6                  0.038   5-hydroxytryptamine (serotonin) receptor 6 
CNR1                  0.036   cannabinoid receptor 1 isoform a 
CNR1                  0.036   cannabinoid receptor 1 isoform a 
CNR1                  0.036   cannabinoid receptor 1 isoform a 
CNR1                  0.036   cannabinoid receptor 1 isoform a 
CNR1                  0.036   cannabinoid receptor 1 isoform a 
S1PR1                 0.036   sphingosine-1-phosphate receptor 1 
CNR1                  0.036   cannabinoid receptor 1 isoform b 
GPR78                 0.036   G protein-coupled receptor 78 
HTR4                  0.034   serotonin 5-HT4 receptor isoform n 
HTR4                  0.034   serotonin 5-HT4 receptor isoform i 
HTR4                  0.034   serotonin 5-HT4 receptor isoform d 
HTR4                  0.034   serotonin 5-HT4 receptor isoform a 
HTR4                  0.034   serotonin 5-HT4 receptor isoform g 
HTR4                  0.034   serotonin 5-HT4 receptor isoform b 
SSTR5                 0.031   somatostatin receptor 5 
LTB4R2                0.031   leukotriene B4 receptor 2 
TAAR5                 0.031   trace amine associated receptor 5 
ADRA1B                0.031   alpha-1B-adrenergic receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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