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Search of human proteins with 239756324
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756324 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756324 PREDICTED: hypothetical protein isoform 2 [Homo sap... 378 e-105
gi|239750834 PREDICTED: hypothetical protein XP_002347574 isofor... 378 e-105
gi|239745198 PREDICTED: hypothetical protein XP_002343404 isofor... 265 2e-71
gi|239756326 PREDICTED: hypothetical protein isoform 3 [Homo sap... 228 2e-60
gi|239750836 PREDICTED: hypothetical protein XP_002347575 isofor... 228 2e-60
gi|95147356 mitogen-activated protein kinase 15 [Homo sapiens] 33 0.20
gi|4507973 zinc finger protein of the cerebellum 3 [Homo sapiens] 33 0.20
gi|19111150 angiomotin isoform 2 [Homo sapiens] 30 0.99
gi|166064029 angiomotin isoform 1 [Homo sapiens] 30 0.99
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 30 1.3
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 30 1.3
gi|45120115 hypothetical protein LOC56905 [Homo sapiens] 30 1.3
gi|169216121 PREDICTED: hypothetical protein [Homo sapiens] 30 1.7
gi|156564238 hypothetical protein LOC129293 [Homo sapiens] 30 1.7
gi|239750454 PREDICTED: hypothetical protein XP_002347366 [Homo ... 29 2.2
gi|153945852 G7c protein [Homo sapiens] 29 2.2
gi|56549694 enabled homolog isoform a [Homo sapiens] 29 2.9
gi|39930375 enabled homolog isoform b [Homo sapiens] 29 2.9
gi|47132585 cAMP-dependent protein kinase, regulatory subunit be... 28 3.7
gi|48255924 NADH-ubiquinone oxidoreductase flavoprotein 3 isofor... 28 4.9
gi|19743865 Fc alpha receptor isoform f [Homo sapiens] 28 4.9
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 28 4.9
gi|222080068 pleckstrin homology domain-containing family G memb... 28 6.4
gi|222080066 pleckstrin homology domain-containing family G memb... 28 6.4
gi|22035569 GC-rich sequence DNA-binding factor candidate isofor... 28 6.4
gi|22035565 GC-rich sequence DNA-binding factor candidate isofor... 28 6.4
gi|225543407 BTB domain protein BDPL [Homo sapiens] 28 6.4
gi|190341087 spondin 2, extracellular matrix protein [Homo sapiens] 28 6.4
gi|6912682 spondin 2, extracellular matrix protein [Homo sapiens] 28 6.4
gi|30181233 leucine-rich repeats and calponin homology (CH) doma... 28 6.4
>gi|239756324 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 194
Score = 378 bits (971), Expect = e-105
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MLSTEEHPGTSDEVSSIGSEFWALSVPTSTSAIAFCLSLQSKLTGLNSSLFLLTSSHSAI 60
MLSTEEHPGTSDEVSSIGSEFWALSVPTSTSAIAFCLSLQSKLTGLNSSLFLLTSSHSAI
Sbjct: 1 MLSTEEHPGTSDEVSSIGSEFWALSVPTSTSAIAFCLSLQSKLTGLNSSLFLLTSSHSAI 60
Query: 61 AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQ 120
AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQ
Sbjct: 61 AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQ 120
Query: 121 RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFR 180
RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFR
Sbjct: 121 RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFR 180
Query: 181 KQTRTGRRGRPQER 194
KQTRTGRRGRPQER
Sbjct: 181 KQTRTGRRGRPQER 194
>gi|239750834 PREDICTED: hypothetical protein XP_002347574 isoform 1
[Homo sapiens]
Length = 194
Score = 378 bits (971), Expect = e-105
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MLSTEEHPGTSDEVSSIGSEFWALSVPTSTSAIAFCLSLQSKLTGLNSSLFLLTSSHSAI 60
MLSTEEHPGTSDEVSSIGSEFWALSVPTSTSAIAFCLSLQSKLTGLNSSLFLLTSSHSAI
Sbjct: 1 MLSTEEHPGTSDEVSSIGSEFWALSVPTSTSAIAFCLSLQSKLTGLNSSLFLLTSSHSAI 60
Query: 61 AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQ 120
AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQ
Sbjct: 61 AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQ 120
Query: 121 RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFR 180
RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFR
Sbjct: 121 RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFR 180
Query: 181 KQTRTGRRGRPQER 194
KQTRTGRRGRPQER
Sbjct: 181 KQTRTGRRGRPQER 194
>gi|239745198 PREDICTED: hypothetical protein XP_002343404 isoform 1
[Homo sapiens]
Length = 135
Score = 265 bits (677), Expect = 2e-71
Identities = 134/135 (99%), Positives = 135/135 (100%)
Query: 60 IAAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAG 119
+AAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAG
Sbjct: 1 MAAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAG 60
Query: 120 QRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKF 179
QRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKF
Sbjct: 61 QRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKF 120
Query: 180 RKQTRTGRRGRPQER 194
RKQTRTGRRGRPQER
Sbjct: 121 RKQTRTGRRGRPQER 135
>gi|239756326 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
Length = 114
Score = 228 bits (581), Expect = 2e-60
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 81 MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 140
MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 1 MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
Query: 141 APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 194
APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 61 APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
>gi|239750836 PREDICTED: hypothetical protein XP_002347575 isoform 2
[Homo sapiens]
Length = 114
Score = 228 bits (581), Expect = 2e-60
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 81 MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 140
MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 1 MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
Query: 141 APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 194
APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 61 APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
>gi|95147356 mitogen-activated protein kinase 15 [Homo sapiens]
Length = 544
Score = 32.7 bits (73), Expect = 0.20
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 111 GSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGH---ERESPFSRKN 166
G G+ + H RA+ +LP + P+ P PR +PGH E ESP + KN
Sbjct: 357 GPEGVSPSQAHLHKPRADP------QLPSRTPVQGPRPRPQSSPGHDPAEHESPRAAKN 409
>gi|4507973 zinc finger protein of the cerebellum 3 [Homo sapiens]
Length = 467
Score = 32.7 bits (73), Expect = 0.20
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 99 PQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 154
P+ H+ P R+ G +GL G H+A A A AAA P A L+ +A TP
Sbjct: 22 PRHHEMPNREPAG-MGLNPFGDSTHAAAAAAAAAAFKLSPAAAHDLSSGQSSAFTP 76
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 30.4 bits (67), Expect = 0.99
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 125 ARAEAGAAAGTRLPRQAPLLAPDPRTAVTPG-HERESPFSRKNG 167
A A+A A A T+ P AP +AP P TP + E P S G
Sbjct: 582 AAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATG 625
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 30.4 bits (67), Expect = 0.99
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 125 ARAEAGAAAGTRLPRQAPLLAPDPRTAVTPG-HERESPFSRKNG 167
A A+A A A T+ P AP +AP P TP + E P S G
Sbjct: 991 AAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATG 1034
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 103 QTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESP 161
+ P +V+G EAA A AR A AAG+ +P + A + PGH R P
Sbjct: 238 RAPAARVVGG---EAAATAAARARPRAPLAAGSPVPVRPQDAAARSAAGMQPGHGRRPP 293
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 30.0 bits (66), Expect = 1.3
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 90 KSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDP- 148
K++ A Q P L+Q Q L + +A ARA AG +PR P AP P
Sbjct: 2135 KTVGAAQLKPTLNQLKQTQKLQDMEAQAGWAAPGEARAMTAPRAGVGMPRLPP--APGPL 2192
Query: 149 RTAVTPG 155
T V PG
Sbjct: 2193 STTVIPG 2199
>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
Length = 1047
Score = 30.0 bits (66), Expect = 1.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 125 ARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFS 163
ARA+A A+A P AP+ P P + PG E F+
Sbjct: 730 ARAQAPASARDPAPAPAPVAGPAPASTSAPGDSLEQHFT 768
>gi|169216121 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 29.6 bits (65), Expect = 1.7
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 48 SSLFLLTSSHSAIAAFSLAKESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLR 107
S L L ++H + A SL + +I LP++ F + + + +P+ T
Sbjct: 33 SRLLPLQAAHLSCAPASLTRRVRICLPVA------FKTAASSSAFSSWSPWPRRADTGT- 85
Query: 108 QVLGSLGLEAAGQRAHSARAEAGAAAGTRLPR 139
GS+GL G H R+ +G R+PR
Sbjct: 86 -TFGSVGLYLQGWGCHRPRSASGRPDEIRVPR 116
>gi|156564238 hypothetical protein LOC129293 [Homo sapiens]
Length = 456
Score = 29.6 bits (65), Expect = 1.7
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 118 AGQRAHSARAEAGAAAGTR----LPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPN 173
AG+ H +++ + T P+ L P P AV+ GH P + G P+
Sbjct: 306 AGRPIHKGKSKKTSTRPTLSTIFAPKVPTLEVPAPE-AVSSGHSTLPPLVSRPGSADTPS 364
Query: 174 RALLKFRKQTRTGRRGRPQER 194
A +FRK+ R +R RP+ R
Sbjct: 365 EAEQRFRKKRRRSQR-RPRLR 384
>gi|239750454 PREDICTED: hypothetical protein XP_002347366 [Homo
sapiens]
Length = 144
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 111 GSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNG 167
G L + A + +A G T LPR+ PL A DP P E P R NG
Sbjct: 7 GWLQIPAGNGNSPGVKAAPGPLCLTSLPRKRPLPASDPSWG-APITEARGPGLRSNG 62
>gi|153945852 G7c protein [Homo sapiens]
Length = 891
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 89 QKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAP--LLAP 146
++ LLA P L TP L +G +AAG+R H A + L P LAP
Sbjct: 679 ERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLELSGPSGFLAP 738
Query: 147 DPRTAVT 153
+ ++
Sbjct: 739 GSKVPLS 745
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 28.9 bits (63), Expect = 2.9
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 99 PQLHQTPLRQVLGSL-----GLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTA 151
P +TPL VLG GL+AA Q A + ++ G G P P L P P A
Sbjct: 270 PASVETPLNSVLGDSSASEPGLQAASQPAETP-SQQGIVLGPLAPPPPPPLPPGPAQA 326
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 28.9 bits (63), Expect = 2.9
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 99 PQLHQTPLRQVLGSL-----GLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTA 151
P +TPL VLG GL+AA Q A + ++ G G P P L P P A
Sbjct: 270 PASVETPLNSVLGDSSASEPGLQAASQPAETP-SQQGIVLGPLAPPPPPPLPPGPAQA 326
>gi|47132585 cAMP-dependent protein kinase, regulatory subunit beta
2 [Homo sapiens]
Length = 418
Score = 28.5 bits (62), Expect = 3.7
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 94 ALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVT 153
ALQHF +L Q R+ G E + GAAAG P + A +P + +
Sbjct: 32 ALQHFTRLQQENERKGTARFGHEGR------TWGDLGAAAGGGTPSKGVNFAEEPMQSDS 85
Query: 154 PGHERESPFSRKNGVFFEP 172
E E G F P
Sbjct: 86 EDGEEEEAAPADAGAFNAP 104
>gi|48255924 NADH-ubiquinone oxidoreductase flavoprotein 3 isoform a
precursor [Homo sapiens]
Length = 473
Score = 28.1 bits (61), Expect = 4.9
Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 67 KESKIFLPLSGNLQMNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSAR 126
KE+ + G+L+ ++ Q L+ P + + +L LEA G+ A
Sbjct: 352 KETSGTQGIEGHLKGGQAIVEDQIPPSNLETVPVENNHGFHEKTAALKLEAEGEAMEDAA 411
Query: 127 AEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTG 186
A GT+ P P D T H S ++ F + N L KFR +
Sbjct: 412 APGDDRGGTQEPAPVPAEPFDNTTYKNLQHHDYSTYT-----FLDLNLELSKFRMPQPSS 466
Query: 187 RRGRPQ 192
R P+
Sbjct: 467 GRESPR 472
>gi|19743865 Fc alpha receptor isoform f [Homo sapiens]
Length = 209
Score = 28.1 bits (61), Expect = 4.9
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 43 LTGLNSSLFLLTSSHSAIAAFSLAKESKIFLP--LSGNLQMNFLLLVAQKSLLALQ--HF 98
+ G N SL +S+H FSLAKE ++ LP SG NF L ++ + H
Sbjct: 125 MPGENISL-TCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRLHP 183
Query: 99 PQLHQTPL 106
P+LH L
Sbjct: 184 PRLHDAEL 191
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 28.1 bits (61), Expect = 4.9
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 107 RQVLGSLGLEAAGQ------RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERES 160
RQ LGS A R ARA G AG + + P T++ G +R+S
Sbjct: 1160 RQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKHVRSSSMASLRSPSTSIKSGLKRDS 1219
Query: 161 PFSRKNGVFFEPNRALLKFRKQTRTGR 187
K FF+ + R+ T G+
Sbjct: 1220 KSEDKGLSFFKSALRQKETRRSTDLGK 1246
>gi|222080068 pleckstrin homology domain-containing family G member
6 isoform a [Homo sapiens]
Length = 790
Score = 27.7 bits (60), Expect = 6.4
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 95 LQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 154
++ F H+ PL+ ++ S +E G R RA A + AG PR P+L P R
Sbjct: 1 MKAFGPPHEGPLQGLVASR-IETYGGRH---RASAQSTAGRLYPRGYPVLDPSRRRL--- 53
Query: 155 GHERESPFSRKNG 167
++ PF+R +G
Sbjct: 54 --QQYVPFARGSG 64
>gi|222080066 pleckstrin homology domain-containing family G member
6 isoform a [Homo sapiens]
Length = 790
Score = 27.7 bits (60), Expect = 6.4
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 95 LQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 154
++ F H+ PL+ ++ S +E G R RA A + AG PR P+L P R
Sbjct: 1 MKAFGPPHEGPLQGLVASR-IETYGGRH---RASAQSTAGRLYPRGYPVLDPSRRRL--- 53
Query: 155 GHERESPFSRKNG 167
++ PF+R +G
Sbjct: 54 --QQYVPFARGSG 64
>gi|22035569 GC-rich sequence DNA-binding factor candidate isoform 2
[Homo sapiens]
Length = 815
Score = 27.7 bits (60), Expect = 6.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 128 EAGAAAGTRLPRQAPLL--APDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRT 185
EAG G R P LL P P +A+TPG E+ G EP LK RK+ R
Sbjct: 41 EAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGA--EPGNG-LKPRKRPRE 97
Query: 186 GR 187
+
Sbjct: 98 NK 99
>gi|22035565 GC-rich sequence DNA-binding factor candidate isoform 1
[Homo sapiens]
Length = 917
Score = 27.7 bits (60), Expect = 6.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 128 EAGAAAGTRLPRQAPLL--APDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRT 185
EAG G R P LL P P +A+TPG E+ G EP LK RK+ R
Sbjct: 41 EAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGA--EPGNG-LKPRKRPRE 97
Query: 186 GR 187
+
Sbjct: 98 NK 99
>gi|225543407 BTB domain protein BDPL [Homo sapiens]
Length = 485
Score = 27.7 bits (60), Expect = 6.4
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query: 117 AAGQRAHSARAEAGAA----AGTRLPRQAPLLAPDPRTAVTP---GHERESP 161
A+ A A + AGAA AG R P AP AP P P + +ESP
Sbjct: 9 ASAAAADLANSNAGAAVGRKAGPRSPPSAPAPAPPPPAPAPPTLGNNHQESP 60
>gi|190341087 spondin 2, extracellular matrix protein [Homo sapiens]
Length = 331
Score = 27.7 bits (60), Expect = 6.4
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 106 LRQVLGSLGLEAAGQRAHSARAEA-------GAAAGTRLPRQAPLLAPDPRTAVTPGHER 158
L LG+ G G+ SARA A G + T P+Q PL P + + G
Sbjct: 18 LLATLGAAGQPLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAH 77
Query: 159 ESPFS--RKN 166
S +S RKN
Sbjct: 78 SSDYSMWRKN 87
>gi|6912682 spondin 2, extracellular matrix protein [Homo sapiens]
Length = 331
Score = 27.7 bits (60), Expect = 6.4
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Query: 106 LRQVLGSLGLEAAGQRAHSARAEA-------GAAAGTRLPRQAPLLAPDPRTAVTPGHER 158
L LG+ G G+ SARA A G + T P+Q PL P + + G
Sbjct: 18 LLATLGAAGQPLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAH 77
Query: 159 ESPFS--RKN 166
S +S RKN
Sbjct: 78 SSDYSMWRKN 87
>gi|30181233 leucine-rich repeats and calponin homology (CH) domain
containing 4 [Homo sapiens]
Length = 683
Score = 27.7 bits (60), Expect = 6.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 124 SARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQT 183
S+ ++AGAAAG P AP + +P P +P R G PN L + Q+
Sbjct: 460 SSASQAGAAAGQGAPAPAP-ASQEPLPIAGPA---TAPAPRPLGSIQRPNSFLFRSSSQS 515
Query: 184 RTG 186
+G
Sbjct: 516 GSG 518
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,093,576
Number of Sequences: 37866
Number of extensions: 293033
Number of successful extensions: 1289
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1268
Number of HSP's gapped (non-prelim): 43
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.