Search of human proteins with 239756051

Search of human proteins with 239756051

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756051 PREDICTED: hypothetical protein XP_002344785 [Homo
sapiens]
         (132 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756051 PREDICTED: hypothetical protein XP_002344785 [Homo ...   281   1e-76
gi|239750558 PREDICTED: hypothetical protein [Homo sapiens]           281   1e-76
gi|239744855 PREDICTED: hypothetical protein XP_002344122 [Homo ...   281   1e-76
gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]            32   0.11 
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]            32   0.11 
gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo ...    32   0.11 
gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo ...    32   0.11 
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho...    32   0.11 
gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]            32   0.15 
gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]           32   0.15 
gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]           32   0.15 
gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo ...    32   0.19 
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo ...    32   0.19 
gi|169210192 PREDICTED: hypothetical protein [Homo sapiens]            31   0.25 
gi|113425957 PREDICTED: hypothetical protein [Homo sapiens]            31   0.25 
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ...    31   0.32 
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ...    31   0.32 
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]            30   0.42 
gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]            30   0.42 
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]            30   0.42 
gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo ...    30   0.42 
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]            30   0.42 
gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo ...    30   0.42 
gi|145199237 transcription elongation factor B polypeptide 3 bin...    30   0.42 
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ...    30   0.55 
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]            30   0.55 

>gi|239756051 PREDICTED: hypothetical protein XP_002344785 [Homo
           sapiens]
          Length = 132

 Score =  281 bits (718), Expect = 1e-76
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR 60
           MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR
Sbjct: 1   MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR 60

Query: 61  RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT 120
           RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT
Sbjct: 61  RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT 120

Query: 121 KCRAAGRTWLGS 132
           KCRAAGRTWLGS
Sbjct: 121 KCRAAGRTWLGS 132


>gi|239750558 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 132

 Score =  281 bits (718), Expect = 1e-76
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR 60
           MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR
Sbjct: 1   MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR 60

Query: 61  RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT 120
           RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT
Sbjct: 61  RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT 120

Query: 121 KCRAAGRTWLGS 132
           KCRAAGRTWLGS
Sbjct: 121 KCRAAGRTWLGS 132


>gi|239744855 PREDICTED: hypothetical protein XP_002344122 [Homo
           sapiens]
          Length = 132

 Score =  281 bits (718), Expect = 1e-76
 Identities = 132/132 (100%), Positives = 132/132 (100%)

Query: 1   MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR 60
           MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR
Sbjct: 1   MTLENRLESGFCSGDLIVFQVGVKSFQQVSFPASRDPGGPSEQGGWDRSASFSRPHGRRR 60

Query: 61  RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT 120
           RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT
Sbjct: 61  RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSPT 120

Query: 121 KCRAAGRTWLGS 132
           KCRAAGRTWLGS
Sbjct: 121 KCRAAGRTWLGS 132


>gi|239756877 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 34 SRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPR 71
          +R P  P  +G   RSA  S P   RRR G   RRPPR
Sbjct: 23 TRGPSPPRTRGT-PRSAQSSHPGSSRRRSGTRRRRPPR 59


>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 466

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 37  PGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRG 96
           P G    GG   +++  RP  +    G G R    G +     G P G R   +G RR+ 
Sbjct: 127 PSGAQSCGGPAPASALRRPLTQWDASGGGGRASHSGPR----AGTPGGGRSSRAGARRK- 181

Query: 97  GRELCHLATPCRLMTRRFPWSSPTKCRAAGRTWLGS 132
                   TP  L   +    S  +C+  G +W GS
Sbjct: 182 --------TPLSLCPLKLRKGSSRRCQGLGSSWGGS 209


>gi|239751371 PREDICTED: hypothetical protein XP_002347821 [Homo
          sapiens]
          Length = 140

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 34 SRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPR 71
          +R P  P  +G   RSA  S P   RRR G   RRPPR
Sbjct: 23 TRGPSPPRTRGT-PRSAQSSHPGSSRRRSGTRRRRPPR 59


>gi|239745880 PREDICTED: hypothetical protein XP_002343571 [Homo
          sapiens]
          Length = 140

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 34 SRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPR 71
          +R P  P  +G   RSA  S P   RRR G   RRPPR
Sbjct: 23 TRGPSPPRTRGT-PRSAQSSHPGSSRRRSGTRRRRPPR 59


>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
           sapiens]
          Length = 520

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 14/29 (48%), Positives = 15/29 (51%)

Query: 34  SRDPGGPSEQGGWDRSASFSRPHGRRRRP 62
           S  PG   E GGWDR +S  R  G   RP
Sbjct: 441 SSSPGSAGELGGWDRGSSLLRVSGLESRP 469


>gi|239757749 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 264

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 30  SFPASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRD 89
           S+P S +P    ++GG    A+   P     RP  G  RPP  LQ +  C R AG RGR+
Sbjct: 9   SYPWSAEPTDAEKRGGARAKATPPAP-----RPRPGGFRPP--LQRAR-CYRAAGGRGRE 60

Query: 90  SGRRRRGGRELCHLATPCRLMTRRFPWSS 118
           +G   +G R    LA   R     FP +S
Sbjct: 61  TG-NAQGPR----LALQARAAAPAFPAAS 84


>gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 30  SFPASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRD 89
           S+P S +P    ++GG    A+   P     RP  G  RPP  LQ +  C R AG RGR+
Sbjct: 3   SYPWSAEPTDAEKRGGARAKATPPAP-----RPRPGGFRPP--LQRAR-CYRAAGGRGRE 54

Query: 90  SGRRRRGGRELCHLATPCRLMTRRFPWSS 118
           +G   +G R    LA   R     FP +S
Sbjct: 55  TG-NAQGPR----LALQARAAAPAFPAAS 78


>gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens]
          Length = 317

 Score = 32.0 bits (71), Expect = 0.15
 Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 13/89 (14%)

Query: 30  SFPASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRD 89
           S+P S +P    ++GG    A+   P     RP  G  RPP  LQ +  C R AG RGR+
Sbjct: 3   SYPWSAEPTDAEKRGGARAKATPPAP-----RPRPGGFRPP--LQRAR-CYRAAGGRGRE 54

Query: 90  SGRRRRGGRELCHLATPCRLMTRRFPWSS 118
           +G   +G R    LA   R     FP +S
Sbjct: 55  TG-NAQGPR----LALQARAAAPAFPAAS 78


>gi|239755634 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 32  PASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRP----AGLRG 87
           P SR P  PS + G  +     R  G R R G G     RG   SL   R     A + G
Sbjct: 132 PPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVG 191

Query: 88  RDSGRRRRGGRELCHLATP 106
           R   RR + G  +    +P
Sbjct: 192 RHEARRLKPGVSVSSSLSP 210


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 40  PSEQGGWDRSASFSRPHGRRRRP-GAGTRRPPRG-LQLSLLCGRPAGLRGRDSGRRRRGG 97
           P+    W   A  SR  GRR  P G   R P RG    +     P   RG  +G  R GG
Sbjct: 78  PARSAAWGPPARASRAAGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGG 137

Query: 98  RELCHLATPCRLMTRRFP 115
                 A    +  RR P
Sbjct: 138 ATAASSAGTRSVPARRLP 155


>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 37  PGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRG 96
           P G    GG   +++  RP  +    G G R    G +     G P G R   +G RR+ 
Sbjct: 127 PSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPR----AGTPGGGRSSRAGARRKT 182

Query: 97  GRELCHLATPCRLMTRRFPWSSPTKCRAAGRTWLGS 132
              LC L         +    S  +C+  G +W GS
Sbjct: 183 PLSLCPL---------KLRKGSSRRCQGLGSSWGGS 209


>gi|239750121 PREDICTED: hypothetical protein XP_002347280 [Homo
           sapiens]
          Length = 402

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 32  PASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRP----AGLRG 87
           P SR P  PS + G  +     R  G R R G G     RG   SL   R     A + G
Sbjct: 132 PPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVG 191

Query: 88  RDSGRRRRGGRELCHLATP 106
           R   RR + G  +    +P
Sbjct: 192 RHEARRLKPGVSVSSSLSP 210


>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 564

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 13/96 (13%)

Query: 37  PGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRG 96
           P G    GG   +++  RP  +    G G R    G +     G P G R   +G RR+ 
Sbjct: 127 PSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPR----AGTPGGGRSSRAGARRKT 182

Query: 97  GRELCHLATPCRLMTRRFPWSSPTKCRAAGRTWLGS 132
              LC L         +    S  +C+  G +W GS
Sbjct: 183 PLSLCPL---------KLRKGSSRRCQGLGSSWGGS 209


>gi|239744429 PREDICTED: hypothetical protein XP_002343157 [Homo
           sapiens]
          Length = 449

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 32  PASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRP----AGLRG 87
           P SR P  PS + G  +     R  G R R G G     RG   SL   R     A + G
Sbjct: 132 PPSRVPAEPSSRRGASKRRESWRTDGERLRSGRGCAGAARGPDASLDTRREGWPRAAVVG 191

Query: 88  RDSGRRRRGGRELCHLATP 106
           R   RR + G  +    +P
Sbjct: 192 RHEARRLKPGVSVSSSLSP 210


>gi|169210192 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score = 31.2 bits (69), Expect = 0.25
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 34  SRDPGGPSEQGGWDRS--ASFSRPHGRRRRPGAGTRRPP--RGLQLSLLCGRPAGLRGRD 89
           +R PGG    G    +  ++ + P+     PG     PP  R  ++S LCG   G R   
Sbjct: 64  ARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRR-- 121

Query: 90  SGRRRRGGRELCHLATPCRLMTRRFPWSSPTKCRAAGR 127
           +G   R GR L  L+ PC+ +       +P     AGR
Sbjct: 122 AGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGR 159


>gi|113425957 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score = 31.2 bits (69), Expect = 0.25
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 34  SRDPGGPSEQGGWDRS--ASFSRPHGRRRRPGAGTRRPP--RGLQLSLLCGRPAGLRGRD 89
           +R PGG    G    +  ++ + P+     PG     PP  R  ++S LCG   G R   
Sbjct: 64  ARGPGGGGNPGDTVLTPLSAPADPNTHPPAPGTQPALPPLARPCRVSTLCGSRLGRRR-- 121

Query: 90  SGRRRRGGRELCHLATPCRLMTRRFPWSSPTKCRAAGR 127
           +G   R GR L  L+ PC+ +       +P     AGR
Sbjct: 122 AGEGPRPGRALPFLSLPCQAVPAPTLTPTPPDPPRAGR 159


>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
           sapiens]
          Length = 647

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 32  PASRDPG-GPSEQG--GWDRSAS---FSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGL 85
           P +R  G GP+ +G   W   A     +RP GRR+ P  G R P  G   S      A  
Sbjct: 402 PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAG 461

Query: 86  RGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSP 119
           RG D G   R  R        C    R  P + P
Sbjct: 462 RGWDPGGGSRARRRAAR-GRGCLRSARSSPHARP 494



 Score = 28.9 bits (63), Expect = 1.2
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 48  RSASFSRPHGRRR---RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLA 104
           + AS+ RP    R    P A  R     L  S   GRP G  G  +GR  RG    C + 
Sbjct: 258 QKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVG 317

Query: 105 TPCRLMTR-RFPWSSPTKCRAAGRTW 129
                  +    W+   + RA G TW
Sbjct: 318 LARGTAPQPASTWALAARPRAGG-TW 342


>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
           sapiens]
          Length = 647

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 32  PASRDPG-GPSEQG--GWDRSAS---FSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGL 85
           P +R  G GP+ +G   W   A     +RP GRR+ P  G R P  G   S      A  
Sbjct: 402 PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAG 461

Query: 86  RGRDSGRRRRGGRELCHLATPCRLMTRRFPWSSP 119
           RG D G   R  R        C    R  P + P
Sbjct: 462 RGWDPGGGSRARRRAAR-GRGCLRSARSSPHARP 494



 Score = 28.9 bits (63), Expect = 1.2
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 48  RSASFSRPHGRRR---RPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRRRGGRELCHLA 104
           + AS+ RP    R    P A  R     L  S   GRP G  G  +GR  RG    C + 
Sbjct: 258 QKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVG 317

Query: 105 TPCRLMTR-RFPWSSPTKCRAAGRTW 129
                  +    W+   + RA G TW
Sbjct: 318 LARGTAPQPASTWALAARPRAGG-TW 342


>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 44  GGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRR 94
           GGW+           RRR  + T+ PP  L  +    RPA LR R +GR R
Sbjct: 197 GGWNTETL--NTEDARRRARSATQAPPLALVPARSRARPAHLRVRAAGRSR 245


>gi|239756892 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 576

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 19/78 (24%)

Query: 32  PASRDPGGPSEQG--GWDRSASFSRPHGRRRRPGAG--------------TRR---PPRG 72
           PA R+  GP      G  R+ + + P  RRRR GAG              TRR   P R 
Sbjct: 249 PAGRELEGPGGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARP 308

Query: 73  LQLSLLCGRPAGLRGRDS 90
                 C RPAG R R +
Sbjct: 309 DAAGEQCPRPAGARPRQA 326


>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 44  GGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRR 94
           GGW+           RRR  + T+ PP  L  +    RPA LR R +GR R
Sbjct: 197 GGWNTETL--NTEDARRRARSATQAPPLALVPARSRARPAHLRVRAAGRSR 245


>gi|239751388 PREDICTED: hypothetical protein XP_002347834 [Homo
           sapiens]
          Length = 404

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 19/78 (24%)

Query: 32  PASRDPGGPSEQG--GWDRSASFSRPHGRRRRPGAG--------------TRR---PPRG 72
           PA R+  GP      G  R+ + + P  RRRR GAG              TRR   P R 
Sbjct: 249 PAGRELEGPGGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARP 308

Query: 73  LQLSLLCGRPAGLRGRDS 90
                 C RPAG R R +
Sbjct: 309 DAAGEQCPRPAGARPRQA 326


>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 44  GGWDRSASFSRPHGRRRRPGAGTRRPPRGLQLSLLCGRPAGLRGRDSGRRR 94
           GGW+           RRR  + T+ PP  L  +    RPA LR R +GR R
Sbjct: 197 GGWNTETL--NTEDARRRARSATQAPPLALVPARSRARPAHLRVRAAGRSR 245


>gi|239745895 PREDICTED: hypothetical protein XP_002343612 [Homo
           sapiens]
          Length = 404

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 19/78 (24%)

Query: 32  PASRDPGGPSEQG--GWDRSASFSRPHGRRRRPGAG--------------TRR---PPRG 72
           PA R+  GP      G  R+ + + P  RRRR GAG              TRR   P R 
Sbjct: 249 PAGRELEGPGGGAALGEQRAGATTTPGSRRRRRGAGRSAGWPHPGGPSRPTRRNAPPARP 308

Query: 73  LQLSLLCGRPAGLRGRDS 90
                 C RPAG R R +
Sbjct: 309 DAAGEQCPRPAGARPRQA 326


>gi|145199237 transcription elongation factor B polypeptide 3
           binding protein 1 [Homo sapiens]
          Length = 1221

 Score = 30.4 bits (67), Expect = 0.42
 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 32  PASRDPGGPSEQGGWDRSASFSRPHGRRRRPGAGTRRPPRGLQL 75
           P+S  P   S +G  DR A    P     RP AG R PPR LQL
Sbjct: 437 PSSATPVATSGKGRPDRPARRPSPTSGDSRPAAG-RGPPRPLQL 479


>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
           sapiens]
          Length = 231

 Score = 30.0 bits (66), Expect = 0.55
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 37  PGGPSEQGGWDRSASFSRPHGRRRRPGAGT---------RRPPRGLQLSLLCGRPAGLRG 87
           PGG    GG   +  ++     +R  GAG          R  P GL+   L  R  G  G
Sbjct: 82  PGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 141

Query: 88  RDSGRRRRGG 97
           R +GR R+ G
Sbjct: 142 RGAGRARKPG 151


>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 30.0 bits (66), Expect = 0.55
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 37  PGGPSEQGGWDRSASFSRPHGRRRRPGAGT---------RRPPRGLQLSLLCGRPAGLRG 87
           PGG    GG   +  ++     +R  GAG          R  P GL+   L  R  G  G
Sbjct: 82  PGGSGGGGGGCGAQHWAAGRRAQREQGAGAAVLADFGHVRAAPSGLRRRRLQRRRGGRGG 141

Query: 88  RDSGRRRRGG 97
           R +GR R+ G
Sbjct: 142 RGAGRARKPG 151


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.140    0.462 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,751,816
Number of Sequences: 37866
Number of extensions: 394396
Number of successful extensions: 1575
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 1486
Number of HSP's gapped (non-prelim): 193
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.