Guide to the Human Genome
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Name: LOC100286897 Sequence: fasta or formatted (132aa) NCBI GI: 239744855
Description:

PREDICTED: hypothetical protein XP_002344122

Not currently referenced in the text

Other entries for this name:
alt mRNA {132aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          7           2
 C cysteine            3.8          5           1
 D aspartate           3.0          4           1
 E glutamate           3.0          4           1
 F phenylalanine       4.5          6           1
 G glycine            14.4         19           2
 H histidine           1.5          2           1
 I isoleucine          0.8          1           1
 K lysine              1.5          2           1
 L leucine             9.1         12           2
 M methionine          1.5          2           1
 N asparagine          0.8          1           1
 P proline             8.3         11           2
 Q glutamine           3.8          5           2
 R arginine           18.2         24           4
 S serine             10.6         14           2
 T threonine           4.5          6           1
 V valine              3.0          4           1
 W tryptophan          2.3          3           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002344122 
LOC100291617          1.000   PREDICTED: hypothetical protein XP_002344785 
LOC100286897          1.000   PREDICTED: hypothetical protein 
LOC100292592          0.027   PREDICTED: hypothetical protein 
FLJ31945              0.027   PREDICTED: hypothetical protein 
LOC100289939          0.027   PREDICTED: hypothetical protein XP_002347821 
LOC100288866          0.027   PREDICTED: hypothetical protein XP_002343571 
CREB3L2               0.027   cAMP responsive element binding protein 3-like 2 [Ho...
LOC100293492          0.027   PREDICTED: hypothetical protein 
LOC729162             0.027   PREDICTED: similar to hCG1981372 
LOC729162             0.027   PREDICTED: similar to hCG1981372 
LOC100293604          0.027   PREDICTED: hypothetical protein 
LOC100293375          0.027   PREDICTED: hypothetical protein 
FLJ31945              0.027   PREDICTED: hypothetical protein 
LOC100289721          0.027   PREDICTED: hypothetical protein XP_002347280 
FLJ31945              0.027   PREDICTED: hypothetical protein 
LOC100287837          0.027   PREDICTED: hypothetical protein XP_002343157 
LOC728804             0.023   PREDICTED: hypothetical protein 
LOC728804             0.023   PREDICTED: hypothetical protein 
LOC100290372          0.023   PREDICTED: hypothetical protein XP_002346788 
LOC100288606          0.023   PREDICTED: hypothetical protein XP_002342652 
LOC729417             0.020   PREDICTED: hypothetical protein 
LOC100293107          0.020   PREDICTED: hypothetical protein 
LOC729417             0.020   PREDICTED: hypothetical protein 
LOC100290679          0.020   PREDICTED: hypothetical protein XP_002347834 
LOC729417             0.020   PREDICTED: hypothetical protein 
LOC100288571          0.020   PREDICTED: hypothetical protein XP_002343612 
REXO1                 0.020   transcription elongation factor B polypeptide 3 bin...
LOC100288658          0.020   PREDICTED: hypothetical protein XP_002342750 
LOC100288658          0.020   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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