Guide to the Human Genome
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Name: LOC283486 Sequence: fasta or formatted (123aa) NCBI GI: 239756033
Description:

PREDICTED: hypothetical protein LOC283486

Not currently referenced in the text

Other entries for this name:
alt prot {123aa} PREDICTED: hypothetical protein LOC283486
alt prot {123aa} PREDICTED: hypothetical protein LOC283486
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.2         15           1
 C cysteine            6.5          8           1
 D aspartate           0.0          0           0
 E glutamate           5.7          7           2
 F phenylalanine       0.8          1           1
 G glycine            16.3         20           2
 H histidine           3.3          4           1
 I isoleucine          0.8          1           1
 K lysine              1.6          2           1
 L leucine             6.5          8           1
 M methionine          0.8          1           1
 N asparagine          0.0          0           0
 P proline             9.8         12           1
 Q glutamine           3.3          4           1
 R arginine            9.8         12           1
 S serine              8.1         10           2
 T threonine           4.1          5           1
 V valine              6.5          8           1
 W tryptophan          4.1          5           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC283486 
LOC283486             0.992   PREDICTED: hypothetical protein LOC283486 
LOC283486             0.992   PREDICTED: hypothetical protein LOC283486 
LOC100292576          0.028   PREDICTED: hypothetical protein 
LOC100288860          0.028   PREDICTED: hypothetical protein 
LOC100294414          0.028   PREDICTED: hypothetical protein 
LOC100288860          0.028   PREDICTED: hypothetical protein XP_002343712 
CECR6                 0.020   cat eye syndrome chromosome region, candidate 6 isof...
LOC100293375          0.020   PREDICTED: hypothetical protein 
PYROXD2               0.020   pyridine nucleotide-disulphide oxidoreductase domai...
PHF1                  0.020   PHD finger protein 1 isoform a 
LOC100292673          0.020   PREDICTED: hypothetical protein 
LOC100291194          0.020   PREDICTED: hypothetical protein XP_002348117 
LOC100288065          0.020   PREDICTED: hypothetical protein XP_002344233 
DIDO1                 0.020   death inducer-obliterator 1 isoform c 
LOC100291317          0.016   PREDICTED: hypothetical protein XP_002346735 
C3orf32               0.016   hypothetical protein LOC51066 
PCSK9                 0.016   proprotein convertase subtilisin/kexin type 9 prepro...
LOC100291147          0.016   PREDICTED: hypothetical protein XP_002347883 
LOC100291076          0.016   PREDICTED: hypothetical protein XP_002347846 
LOC100289560          0.016   PREDICTED: hypothetical protein XP_002344188 
SNRPB                 0.016   small nuclear ribonucleoprotein polypeptide B/B' iso...
SNRPB                 0.016   small nuclear ribonucleoprotein polypeptide B/B' isof...
PRR12                 0.016   proline rich 12 
SNRPN                 0.012   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.012   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.012   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.012   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.012   small nuclear ribonucleoprotein polypeptide N 
FN1                   0.012   fibronectin 1 isoform 3 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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