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Search of human proteins with 239755705
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755705 PREDICTED: hypothetical protein [Homo sapiens]
(306 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755705 PREDICTED: hypothetical protein [Homo sapiens] 640 0.0
gi|239750217 PREDICTED: hypothetical protein [Homo sapiens] 502 e-142
gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo ... 502 e-142
gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo ... 48 1e-05
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 48 1e-05
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 47 2e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 47 2e-05
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 47 2e-05
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 47 3e-05
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 45 6e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 45 6e-05
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 44 1e-04
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 44 1e-04
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 44 1e-04
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 44 2e-04
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 44 2e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 43 3e-04
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 43 3e-04
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 43 3e-04
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 43 4e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 43 4e-04
gi|150378539 piccolo isoform 1 [Homo sapiens] 43 4e-04
>gi|239755705 PREDICTED: hypothetical protein [Homo sapiens]
Length = 306
Score = 640 bits (1652), Expect = 0.0
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG
Sbjct: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
Query: 61 EKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
EKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN
Sbjct: 61 EKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA
Sbjct: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
Query: 181 LWLGEWRRVEKTFRPSCGIHANGWAQDWVFGLAGRLGTSRPEFKCYQRQLICSGLRFRVL 240
LWLGEWRRVEKTFRPSCGIHANGWAQDWVFGLAGRLGTSRPEFKCYQRQLICSGLRFRVL
Sbjct: 181 LWLGEWRRVEKTFRPSCGIHANGWAQDWVFGLAGRLGTSRPEFKCYQRQLICSGLRFRVL 240
Query: 241 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPSCTPLHMLPPEEELSTLQRFTLTPPTQ 300
CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPSCTPLHMLPPEEELSTLQRFTLTPPTQ
Sbjct: 241 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPSCTPLHMLPPEEELSTLQRFTLTPPTQ 300
Query: 301 PASFRA 306
PASFRA
Sbjct: 301 PASFRA 306
>gi|239750217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 363
Score = 502 bits (1293), Expect = e-142
Identities = 248/274 (90%), Positives = 248/274 (90%), Gaps = 25/274 (9%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG
Sbjct: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
Query: 61 EKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
EKVQPQVLAFPGKSS PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN
Sbjct: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA
Sbjct: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
Query: 181 LWLGEWRRVEKTFRPSCGIHANGWAQDWVFGLAGRLGTSRPEFKCYQRQLICSGLRFRVL 240
LWLGEWRR GRLGTSRPEFKCYQRQLICSGLRFRVL
Sbjct: 181 LWLGEWRR-------------------------GRLGTSRPEFKCYQRQLICSGLRFRVL 215
Query: 241 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS 274
CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS
Sbjct: 216 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS 249
>gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo
sapiens]
Length = 363
Score = 502 bits (1293), Expect = e-142
Identities = 248/274 (90%), Positives = 248/274 (90%), Gaps = 25/274 (9%)
Query: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG
Sbjct: 1 MPLRLHLFNSLTLAKSLPCFGSQFPVCEMRGRREQRRGPFRLCSASNSRLLVRLFLRGNG 60
Query: 61 EKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
EKVQPQVLAFPGKSS PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN
Sbjct: 61 EKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA
Sbjct: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRA 180
Query: 181 LWLGEWRRVEKTFRPSCGIHANGWAQDWVFGLAGRLGTSRPEFKCYQRQLICSGLRFRVL 240
LWLGEWRR GRLGTSRPEFKCYQRQLICSGLRFRVL
Sbjct: 181 LWLGEWRR-------------------------GRLGTSRPEFKCYQRQLICSGLRFRVL 215
Query: 241 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS 274
CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS
Sbjct: 216 CGIGRSVDGEGAAALWHGLGRGCLALSRLVGRPS 249
>gi|39930399 tumor protein p53 inducible nuclear protein 2 [Homo
sapiens]
Length = 220
Score = 47.8 bits (112), Expect = 1e-05
Identities = 44/149 (29%), Positives = 57/149 (38%), Gaps = 35/149 (23%)
Query: 67 VLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGE 126
++ P + PPS G P P+ RPPP+P L DE+ A + P G
Sbjct: 37 IIDLPDSYAAPPSPGAAPAPAGRPPPAPS-------LMDESWFVTPPACFTAEGP---GL 86
Query: 127 GPAR---------------------PSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARR 165
GPAR ST L P +P G E PARR
Sbjct: 87 GPARLQSSPLEDLLIEHPSMSVYVTGSTIVLEPGSPSPLPDAALPDGDLSEG-ELTPARR 145
Query: 166 RPAPAPPLLPLPSRALWL---GEWRRVEK 191
P A PLP+RA L G+ RR+++
Sbjct: 146 EPRAARHAAPLPARAALLEKAGQVRRLQR 174
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 47.8 bits (112), Expect = 1e-05
Identities = 47/134 (35%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 68 LAFPGKSSQPPSAGPTPPPS-------SRPPPSPPRRRR------PAWLQDEAEVAA-AL 113
L FP SQ P PTPPP+ + PPP PPR + PA Q +A +
Sbjct: 908 LQFP--PSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQ 965
Query: 114 AGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPA--- 170
G I + G PA P T T P SV V G P G P+ PAPA
Sbjct: 966 VPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPS-GTPTAPS-HAPAPAPMA 1023
Query: 171 ----PPLLPLPSRA 180
PPLLP ++A
Sbjct: 1024 ATGLPPLLPAENKA 1037
Score = 32.7 bits (73), Expect = 0.41
Identities = 32/96 (33%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 77 PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTG-EGPARPSTQT 135
PP+ P RPPP PP + D AA P T P P +T
Sbjct: 1336 PPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPER-----KPLGTAPHCPRLPLRKT 1390
Query: 136 LRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAP 171
R E+VG PGA G A GR PAP P
Sbjct: 1391 YR-------ENVGGPGAPEGTPA-GRARGGSPAPLP 1418
Score = 31.2 bits (69), Expect = 1.2
Identities = 39/141 (27%), Positives = 48/141 (34%), Gaps = 30/141 (21%)
Query: 56 LRGNGEKVQPQV--LAFPGKSSQPPSAGPTPPPS---------SRPPPSPPRRRRPAWLQ 104
L+G G P + A G S PS PT PPS SRPP PP P
Sbjct: 768 LKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCP---- 823
Query: 105 DEAEVAAALAGYGFI-----------NPSSTGEGPARP--STQTLRRSGAFPCESVGVPG 151
+ L G I NP+ T GP +P Q+ G P P
Sbjct: 824 -PPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPS 882
Query: 152 ARPGR-GAEGRPARRRPAPAP 171
+ + + R PAP P
Sbjct: 883 STSSAVASSSETSSRLPAPTP 903
Score = 30.8 bits (68), Expect = 1.6
Identities = 37/125 (29%), Positives = 40/125 (32%), Gaps = 39/125 (31%)
Query: 71 PGKSSQP--------------PSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
PG SS P PS PT PP SRPP P RP
Sbjct: 771 PGPSSSPSLPHQAPLGDSPHLPSPHPTRPP-SRPPSRPQSVSRP---------------- 813
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCES---VGVPGARPGRGAEGRP-ARRRPAPAPP 172
PS P P G F ++ V P + P A G P RP PP
Sbjct: 814 ----PSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPP 869
Query: 173 LLPLP 177
PLP
Sbjct: 870 EGPLP 874
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 47.4 bits (111), Expect = 2e-05
Identities = 41/135 (30%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 41 RLCSASNSRLLVRLFLRGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRP-PPSPPRRRR 99
RLC R G E+ P A + ++ SA P P SRP PP P +R
Sbjct: 724 RLCQLKGPTCQYRAAQSGPSERPGPPQRALLARGTKQASALSFPAPPSRPLPPDPVSKRL 783
Query: 100 PAWLQDEAEVAAALAGYGFINPSSTGEGPAR--PSTQTLRRSGAFPCESVGVPGARPGRG 157
A L D + S +GPA+ P + L C S +PG PG G
Sbjct: 784 QAELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPG--PGAG 841
Query: 158 AEGRPARRRPAPAPP 172
RPAP PP
Sbjct: 842 IPPLVVPSRPAPPPP 856
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 47.4 bits (111), Expect = 2e-05
Identities = 51/179 (28%), Positives = 62/179 (34%), Gaps = 39/179 (21%)
Query: 26 VCEMRGRR---EQRRGPFRLCSASNSRLLVRLFLRG-----NGEKVQPQVLAFPGKSSQP 77
+C M RR E R L R ++R+ +G N +VQP P + + P
Sbjct: 54 ICRMVRRRHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQP-----PRRGATP 108
Query: 78 PS--------------AGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSS 123
P+ A P P P+ PPP+P PA A AAA A P S
Sbjct: 109 PAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPA-RAPRAAAAAATA------PPS 161
Query: 124 TGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRP-----ARRRPAPAPPLLPLP 177
G P Q A P P P G P AR P P PP P P
Sbjct: 162 PGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAP 220
Score = 33.1 bits (74), Expect = 0.32
Identities = 43/141 (30%), Positives = 48/141 (34%), Gaps = 21/141 (14%)
Query: 62 KVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINP 121
+ P +A PP P PP +PPP P Q E A AG G P
Sbjct: 198 RAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQP--------QPPPEGGAVRAG-GAARP 248
Query: 122 SST--------GEGPARPSTQTLRRSGAFPCESVGVPG--ARPGRGAEGRPARRRPAPAP 171
S G G A R G E G R GA P RP AP
Sbjct: 249 VSLREVVRYLGGSGGAGGRLTRGRVQGLLE-EEAAARGRLERTRLGALALPRGDRPGRAP 307
Query: 172 PLLPL-PSRALWLGEWRRVEK 191
P PSR+ GE R +EK
Sbjct: 308 PAASARPSRSKRGGEERVLEK 328
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/109 (33%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 74 SSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPST 133
++ P G PPP+ PPP PPR + A A G G +P +
Sbjct: 768 AAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETE 827
Query: 134 QTLRRSGAFP----CESVGVPGARPGRGAE-GRPARRRPAPAPPLLPLP 177
GAFP E GVP RP E P RP P P LPLP
Sbjct: 828 TPFSPEGAFPGGGAAEEEGVP--RPRAPPEPPDPGAPRPPPDPGPLPLP 874
Score = 38.1 bits (87), Expect = 0.010
Identities = 41/148 (27%), Positives = 50/148 (33%), Gaps = 35/148 (23%)
Query: 68 LAFPGKSSQPPSAGP---------TP------PPSSRPPPSPPRRRRPA-----WLQDEA 107
L FP + +PP GP TP P P P R PA ++
Sbjct: 1038 LRFPRNTERPPETGPWRAPGPWEKTPESWGPAPTIGEPAPETSLERAPAPSAVVSSRNGG 1097
Query: 108 EVAAALAG----YGFINPSS------TGEGPARPSTQTLR--RSGAFPCESVGVPGARPG 155
E A G G + P + TG P P L G P + PG PG
Sbjct: 1098 ETAPGPLGPAPKNGTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGTAPGGGPG 1157
Query: 156 RGAEGRPA---RRRPAPAPPLLPLPSRA 180
G + + RP P PP LP P A
Sbjct: 1158 SGVDAKAGWVDNTRPQPPPPPLPPPPEA 1185
Score = 32.3 bits (72), Expect = 0.54
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 71 PGKSSQPPSAG-PTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPA 129
P +PP G P PPP P P P R +P ++ + ++ + + GE A
Sbjct: 850 PRAPPEPPDPGAPRPPPDPGPLPLPGPREKPTFVVQVSTEQLLMSLREDVTRNLLGEKGA 909
Query: 130 RPSTQTLRRSGAFPCESVGVPG 151
R++G P VPG
Sbjct: 910 TARETGPRKAGRGPGNREKVPG 931
Score = 29.6 bits (65), Expect = 3.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 82 PTPPPSSRPPPSPPRRRRPAWLQDEAEVA 110
P PPP PP + PRR PA + EVA
Sbjct: 1174 PPPPPLPPPPEAQPRRLEPAPPRARPEVA 1202
Score = 29.3 bits (64), Expect = 4.6
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 12/88 (13%)
Query: 85 PPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPC 144
PP + P P RRP W +A A AG + GPA +
Sbjct: 1265 PPLTLTPFPGPGPRRPPWEGADAGAAGGEAG------GAGAPGPAEEDGED-EDEDEEED 1317
Query: 145 ESVGVPGARPG-RGAEGRPARRRPAPAP 171
E PGA G RG P R R AP P
Sbjct: 1318 EEAAAPGAAAGPRG----PGRARAAPVP 1341
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 46.6 bits (109), Expect = 3e-05
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 15/114 (13%)
Query: 65 PQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSST 124
P+++ P P +A P PPP + PP +P R P + YG + P++
Sbjct: 755 PRLVRRPPPGPAPAAASPGPPPPASPPGAPASPRAP-----------RTSPYGGL-PAAP 802
Query: 125 GEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPS 178
GPA P+ + R S +P PG A RPA + P L P P+
Sbjct: 803 LAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRPA---SSSTPRLGPTPA 853
Score = 37.0 bits (84), Expect = 0.022
Identities = 34/108 (31%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 57 RGNGEKV--QPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALA 114
RG G + P PG PP A P P PPP+PP PA Q A
Sbjct: 4 RGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEA--- 60
Query: 115 GYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRP 162
+ P + EG R RS C G PGA A+G P
Sbjct: 61 ----LPPEAADEGGPRGRL----RSRDSSCGRPGTPGA--ASTAKGSP 98
Score = 29.6 bits (65), Expect = 3.5
Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 90 PPPSPPRRRRPAWLQDEAEVA-AALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVG 148
PPP P A LQ A ++ + P + G S + +RR P +
Sbjct: 717 PPPPPQVTSAIATLQQAAAMSFCPQVARPLVGPLALG------SPRLVRRPPPGPAPAAA 770
Query: 149 VPGARPGRGAEGRPAR-RRPAPAP----PLLPLPSRALWLGEWRRVEKTFRP 195
PG P G PA R P +P P PL AL RR+ + RP
Sbjct: 771 SPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPAL---PARRLSRASRP 819
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 45.8 bits (107), Expect = 5e-05
Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%)
Query: 71 PGKSSQPPSAGPTPPPSSRPPPSPPRR----------RRPAWLQDEAEVAAALAGYGFIN 120
PG+ S PP GP P RP PP R + AW Q + A +
Sbjct: 157 PGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLL 216
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
PS+ RP+ + + A G+R GRG RPA R A PPL L
Sbjct: 217 PSAKPARAPRPAPRAREEAAA---------GSR-GRGGAERPAARGSAQQPPLARL 262
Score = 30.8 bits (68), Expect = 1.6
Identities = 40/143 (27%), Positives = 47/143 (32%), Gaps = 27/143 (18%)
Query: 65 PQVLAFPGKSSQPPSAGPTP---------PPSSRPPPSP-----------PRRRRPAWLQ 104
P LA P S+ PS P P P+ P P RRRR
Sbjct: 290 PPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGG--- 346
Query: 105 DEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPAR 164
+E V G +P GPA P RR+ + G PG P GA+G R
Sbjct: 347 EERRVRGRRQGCALGSPPIPA-GPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVR 405
Query: 165 RRPAP---APPLLPLPSRALWLG 184
P PS A W G
Sbjct: 406 GGVTPRARGSSTCLRPSPATWQG 428
Score = 30.0 bits (66), Expect = 2.7
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 57 RGNGE--KVQPQVLAFPGKSSQ---PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAA 111
RG+G + QP+ A+ +SS P + + PS++P R RPA E A
Sbjct: 183 RGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPA----RAPRPAPRAREEAAAG 238
Query: 112 ALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESV--GVPGARPGRGAEGRPARRRP-- 167
+ G P++ G P + L S S+ P +P G+ P P
Sbjct: 239 SRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLA 298
Query: 168 -APAPPLLPLPSR 179
+ AP L P P R
Sbjct: 299 GSRAPSLSPFPRR 311
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 45.8 bits (107), Expect = 5e-05
Identities = 36/116 (31%), Positives = 45/116 (38%), Gaps = 20/116 (17%)
Query: 71 PGKSSQPPSAGPTPPPSSRPPPSPPRR----------RRPAWLQDEAEVAAALAGYGFIN 120
PG+ S PP GP P RP PP R + AW Q + A +
Sbjct: 157 PGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLL 216
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
PS+ RP+ + + A G+R GRG RPA R A PPL L
Sbjct: 217 PSAKPARAPRPAPRAREEAAA---------GSR-GRGGAERPAARGSAQQPPLARL 262
Score = 30.8 bits (68), Expect = 1.6
Identities = 40/143 (27%), Positives = 47/143 (32%), Gaps = 27/143 (18%)
Query: 65 PQVLAFPGKSSQPPSAGPTP---------PPSSRPPPSP-----------PRRRRPAWLQ 104
P LA P S+ PS P P P+ P P RRRR
Sbjct: 290 PPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGG--- 346
Query: 105 DEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPAR 164
+E V G +P GPA P RR+ + G PG P GA+G R
Sbjct: 347 EERRVRGRRQGCALGSPPIPA-GPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVR 405
Query: 165 RRPAP---APPLLPLPSRALWLG 184
P PS A W G
Sbjct: 406 GGVTPRARGSSTCLRPSPATWQG 428
Score = 30.0 bits (66), Expect = 2.7
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 57 RGNGE--KVQPQVLAFPGKSSQ---PPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAA 111
RG+G + QP+ A+ +SS P + + PS++P R RPA E A
Sbjct: 183 RGSGRVPRGQPEQQAWEQRSSHFLAPEGSVASLLPSAKPA----RAPRPAPRAREEAAAG 238
Query: 112 ALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESV--GVPGARPGRGAEGRPARRRP-- 167
+ G P++ G P + L S S+ P +P G+ P P
Sbjct: 239 SRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLA 298
Query: 168 -APAPPLLPLPSR 179
+ AP L P P R
Sbjct: 299 GSRAPSLSPFPRR 311
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 45.4 bits (106), Expect = 6e-05
Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 72 GKSSQPPSAGPTPPPSSRPP--PSPPRRRRPAWLQDEAEVA---------AALAGYGFIN 120
G+ S+P + GP PP++RPP PSP R+ P + V+ A G
Sbjct: 530 GRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQG 589
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSR 179
P GPA P+ Q S A P G P + R + PA R P P L PS+
Sbjct: 590 PPQKPPGPAGPTRQA---SQAGPVPRTGPPTTQQPRPSGPGPAGR---PKPQLAQKPSQ 642
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/129 (25%), Positives = 49/129 (37%), Gaps = 16/129 (12%)
Query: 59 NGEKVQPQVLAFPGKSSQPPSAGPT---PPPSSRPP---PSPPRRRRPAWLQDEAEVAAA 112
+G+ P L ++SQ P+ P PPP PP P P R+ P + +
Sbjct: 433 HGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQH 492
Query: 113 LAGYG----------FINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRP 162
L+G G +P+S + PA + + G G PGA P P
Sbjct: 493 LSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASP 552
Query: 163 ARRRPAPAP 171
+ +R A P
Sbjct: 553 SPQRQAGPP 561
Score = 35.8 bits (81), Expect = 0.049
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q P + PP GP P PP ++RP Q + ++ G
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP-PQGQQHLSGLGPPAGSP 503
Query: 120 NPS---STGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
P S P +P++Q A P + G +RP G G P PA PP P
Sbjct: 504 LPQRLPSPTSAPQQPASQ-----AAPPTQGQG-RQSRPVAGGPGAP----PAARPPASPS 553
Query: 177 PSR 179
P R
Sbjct: 554 PQR 556
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 45.4 bits (106), Expect = 6e-05
Identities = 38/119 (31%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 72 GKSSQPPSAGPTPPPSSRPP--PSPPRRRRPAWLQDEAEVA---------AALAGYGFIN 120
G+ S+P + GP PP++RPP PSP R+ P + V+ A G
Sbjct: 530 GRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQG 589
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSR 179
P GPA P+ Q S A P G P + R + PA R P P L PS+
Sbjct: 590 PPQKPPGPAGPTRQA---SQAGPVPRTGPPTTQQPRPSGPGPAGR---PKPQLAQKPSQ 642
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/129 (25%), Positives = 49/129 (37%), Gaps = 16/129 (12%)
Query: 59 NGEKVQPQVLAFPGKSSQPPSAGPT---PPPSSRPP---PSPPRRRRPAWLQDEAEVAAA 112
+G+ P L ++SQ P+ P PPP PP P P R+ P + +
Sbjct: 433 HGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQH 492
Query: 113 LAGYG----------FINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRP 162
L+G G +P+S + PA + + G G PGA P P
Sbjct: 493 LSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAARPPASP 552
Query: 163 ARRRPAPAP 171
+ +R A P
Sbjct: 553 SPQRQAGPP 561
Score = 35.8 bits (81), Expect = 0.049
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q P + PP GP P PP ++RP Q + ++ G
Sbjct: 445 GRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP-PQGQQHLSGLGPPAGSP 503
Query: 120 NPS---STGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
P S P +P++Q A P + G +RP G G P PA PP P
Sbjct: 504 LPQRLPSPTSAPQQPASQ-----AAPPTQGQG-RQSRPVAGGPGAP----PAARPPASPS 553
Query: 177 PSR 179
P R
Sbjct: 554 PQR 556
Score = 33.1 bits (74), Expect = 0.32
Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 16/120 (13%)
Query: 65 PQVLAFPGKSSQPPS-AGPTPPPSSRPPPS-------PPRRRRPAWLQDEAEVAAALAGY 116
PQ A P ++++ S +GP PP +S PP P + PA +A A +
Sbjct: 554 PQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRT 613
Query: 117 G---FINPSSTGEGPA-RPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
G P +G GPA RP Q ++ P + V P G + PA A P
Sbjct: 614 GPPTTQQPRPSGPGPAGRPKPQLAQK----PSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 58 GNGEKVQPQVLAFPGK-SSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
GN Q +F G+ SQPP T P+ +P P+ P R PA+ E A
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRA---- 233
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
S G GPA+P+ L P P R GR A G A RRP P P
Sbjct: 234 -----ESRGSGPAQPAHLPLPGPAHSPAPP--APELREGR-APGSTAGRRPRPREP 281
Score = 28.9 bits (63), Expect = 6.0
Identities = 30/116 (25%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 57 RGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
RG+G QP L PG + P A P P P RRP + +A + A
Sbjct: 236 RGSGP-AQPAHLPLPGPAHSP--APPAPELREGRAPGSTAGRRPRPREPQAAEESGCATV 292
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
G G ++P + C R G G EG PA P
Sbjct: 293 GLRRGDCDRAGSSQPPATSGNGERCRFCRR----RRRRGGGGEGEGTHATHGPASP 344
Score = 28.5 bits (62), Expect = 7.8
Identities = 44/154 (28%), Positives = 53/154 (34%), Gaps = 19/154 (12%)
Query: 32 RREQRRGPFRLCSASNSRLLVR-LFLRGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRP 90
R + RGP S + R LFLR G + +L P + G RP
Sbjct: 116 RHRKNRGPSAGTSQLGKKTQCRSLFLRTKG--LCALLLELPPRPPPNLQEGGQRAIFQRP 173
Query: 91 P------PSPPRRR-----RPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRS 139
P P+PPR+ RP + AA A P T PARP R
Sbjct: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAP----QPGPTAP-PARPPAYESREG 228
Query: 140 GAFPCESVGVPGARPGRGAEGRPARRRPAPAPPL 173
ES G A+P PA PAP L
Sbjct: 229 PRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPEL 262
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 58 GNGEKVQPQVLAFPGK-SSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
GN Q +F G+ SQPP T P+ +P P+ P R PA+ E A
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRA---- 233
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
S G GPA+P+ L P P R GR A G A RRP P P
Sbjct: 234 -----ESRGSGPAQPAHLPLPGPAHSPAPP--APELREGR-APGSTAGRRPRPREP 281
Score = 28.9 bits (63), Expect = 6.0
Identities = 30/116 (25%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 57 RGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
RG+G QP L PG + P A P P P RRP + +A + A
Sbjct: 236 RGSGP-AQPAHLPLPGPAHSP--APPAPELREGRAPGSTAGRRPRPREPQAAEESGCATV 292
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
G G ++P + C R G G EG PA P
Sbjct: 293 GLRRGDCDRAGSSQPPATSGNGERCRFCRR----RRRRGGGGEGEGTHATHGPASP 344
Score = 28.5 bits (62), Expect = 7.8
Identities = 44/154 (28%), Positives = 53/154 (34%), Gaps = 19/154 (12%)
Query: 32 RREQRRGPFRLCSASNSRLLVR-LFLRGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRP 90
R + RGP S + R LFLR G + +L P + G RP
Sbjct: 116 RHRKNRGPSAGTSQLGKKTQCRSLFLRTKG--LCALLLELPPRPPPNLQEGGQRAIFQRP 173
Query: 91 P------PSPPRRR-----RPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRS 139
P P+PPR+ RP + AA A P T PARP R
Sbjct: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAP----QPGPTAP-PARPPAYESREG 228
Query: 140 GAFPCESVGVPGARPGRGAEGRPARRRPAPAPPL 173
ES G A+P PA PAP L
Sbjct: 229 PRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPEL 262
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/165 (29%), Positives = 56/165 (33%), Gaps = 46/165 (27%)
Query: 69 AFPGKSSQPPSAGP--------TPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
A P +S +PP P +P P++ PSPP PA E A
Sbjct: 33 ATPARSPRPPLCAPRPAPGRAQSPVPAAGAVPSPPAAAHPARPALRGETPA--------- 83
Query: 121 PSSTGEGPARPSTQTLRRSGAF--PCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPS 178
P G R Q R P G+ RPG+G P+RR P PAPP
Sbjct: 84 PGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPPPNPSRRLP-PAPP----GG 138
Query: 179 RALWL------------GEWRRVEKTFRPSCGIHANGWAQDWVFG 211
R WL G RR FR A DW FG
Sbjct: 139 RRTWLSALATGPAAGGAGRRRRSPPVFR----------AADWGFG 173
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 58 GNGEKVQPQVLAFPGK-SSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
GN Q +F G+ SQPP T P+ +P P+ P R PA+ E A
Sbjct: 178 GNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARPPAYESREGPRGRA---- 233
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
S G GPA+P+ L P P R GR A G A RRP P P
Sbjct: 234 -----ESRGSGPAQPAHLPLPGPAHSPAPP--APELREGR-APGSTAGRRPRPREP 281
Score = 28.9 bits (63), Expect = 6.0
Identities = 30/116 (25%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 57 RGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGY 116
RG+G QP L PG + P A P P P RRP + +A + A
Sbjct: 236 RGSGP-AQPAHLPLPGPAHSP--APPAPELREGRAPGSTAGRRPRPREPQAAEESGCATV 292
Query: 117 GFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
G G ++P + C R G G EG PA P
Sbjct: 293 GLRRGDCDRAGSSQPPATSGNGERCRFCRR----RRRRGGGGEGEGTHATHGPASP 344
Score = 28.5 bits (62), Expect = 7.8
Identities = 44/154 (28%), Positives = 53/154 (34%), Gaps = 19/154 (12%)
Query: 32 RREQRRGPFRLCSASNSRLLVR-LFLRGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRP 90
R + RGP S + R LFLR G + +L P + G RP
Sbjct: 116 RHRKNRGPSAGTSQLGKKTQCRSLFLRTKG--LCALLLELPPRPPPNLQEGGQRAIFQRP 173
Query: 91 P------PSPPRRR-----RPAWLQDEAEVAAALAGYGFINPSSTGEGPARPSTQTLRRS 139
P P+PPR+ RP + AA A P T PARP R
Sbjct: 174 PVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAP----QPGPTAP-PARPPAYESREG 228
Query: 140 GAFPCESVGVPGARPGRGAEGRPARRRPAPAPPL 173
ES G A+P PA PAP L
Sbjct: 229 PRGRAESRGSGPAQPAHLPLPGPAHSPAPPAPEL 262
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 43.9 bits (102), Expect = 2e-04
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 62 KVQPQVLAFPGKSSQPPSAGPTP-PPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFIN 120
+V P+ G+ P GP P PP+ PPP R RR A LQ + + A++ G
Sbjct: 271 EVSPEERPSSGQQDVAPDRGPEPGPPAPLPPPGGARARR-ARLQHSSALTASVEEGGV-- 327
Query: 121 PSSTGEGP-ARPSTQTLRRSGAFP---CESVGVPGARPGRGAEGRPARRRPAPAPPLLPL 176
GE P +RP+T L + P E P P G +G PA P P
Sbjct: 328 ---PGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAPPAGPCAPA 384
Query: 177 PSRA 180
+A
Sbjct: 385 TDKA 388
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 43.5 bits (101), Expect = 2e-04
Identities = 36/134 (26%), Positives = 50/134 (37%), Gaps = 16/134 (11%)
Query: 75 SQPPSAGPTPPPSSRPPP----------SPPRRRRPAWLQDEAEVAAALAGYGFINPSST 124
+QPPS PPP + PP SP + A AAA +GYG + PS+T
Sbjct: 282 AQPPSMSSPPPPPALPPMHRYDMAGLQYSPMMPPGAQSYMNVAAAAAAASGYGGMAPSAT 341
Query: 125 GEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLPLPSRALWLG 184
A Q + A A G G + P+ PP + S+ LG
Sbjct: 342 AAAAAAYGQQPATAAAA------AAAAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLG 395
Query: 185 EWRRVEKTFRPSCG 198
+ R + + P G
Sbjct: 396 DLRDMISMYLPPGG 409
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFI 119
G + Q L P S+ P GP P P P P+PP RP + +G
Sbjct: 212 GMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPG 271
Query: 120 NPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPPLLP 175
P GP +P + P + P + P + +P RP+PAPP +P
Sbjct: 272 MPGQPPGGPPKPWPEG-------PMANAAAPTSTPQKLIPPQPT-GRPSPAPPAVP 319
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 43.1 bits (100), Expect = 3e-04
Identities = 37/134 (27%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 41 RLCSASNSRLLVRLFLRGNGEKVQPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRRRP 100
RLC R G E+ P A + ++ + PPS PP P +R
Sbjct: 724 RLCQLKGPTCQYRAAQSGPSERPGPPQRALLARGTKASALSFPAPPSRPLPPDPVSKRLQ 783
Query: 101 AWLQDEAEVAAALAGYGFINPSSTGEGPAR--PSTQTLRRSGAFPCESVGVPGARPGRGA 158
A L D + S +GPA+ P + L C S +PG PG G
Sbjct: 784 AELADRPNPPTRPLPADPVVRSPKSQGPAKPPPPRKPLPADPQGRCPSGDLPG--PGAGI 841
Query: 159 EGRPARRRPAPAPP 172
RPAP PP
Sbjct: 842 PPLVVPSRPAPPPP 855
>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
Length = 669
Score = 42.7 bits (99), Expect = 4e-04
Identities = 49/164 (29%), Positives = 67/164 (40%), Gaps = 36/164 (21%)
Query: 64 QPQVLAFPGKSSQPPSAGPTPPPSSRPPPSPPRRR--RPAWLQD------------EAEV 109
+P+ + P K QP GP P S+P PS +R +P + D E+ +
Sbjct: 335 EPEFNSLPRKLLQPERRGP-PRKFSQPEPSAVLKRHPQPEFFGDLPRKPPLPSSASESSL 393
Query: 110 AAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAP 169
AA+AG+ +P S G G A T R G V GARPG P RRRP P
Sbjct: 394 PAAVAGFSSRHPLSPGFGAA--GTPRWRSGGL-----VHSGGARPGLR-PSHPPRRRPLP 445
Query: 170 -------APPLLPLPSRALWLGEWRRVE------KTFRPSCGIH 200
P PLP + + +RR + R + G+H
Sbjct: 446 PASSLGHPPAKPPLPPGPVDMQSFRRPSAASIDLRRTRSAAGLH 489
Score = 30.4 bits (67), Expect = 2.0
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 64 QPQVLAFPGKSSQP-----PSAGPTPPPSSRPPPSPPR------RRRPAWLQDEAEV--- 109
QP++ FP K +QP P P P P S P+ + P W +E
Sbjct: 206 QPELSTFPKKPAQPEFNVYPKKPPQPQVGGLPKKSVPQPEFSEAAQTPLWKPQSSEPKRD 265
Query: 110 AAALAGYGFINP-SSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPA 168
++A P S + P +P L R+ + P V V RP R AE + ++P
Sbjct: 266 SSAFPKKASQPPLSDFPKKPPQPELGDLTRTSSEP--EVSVLPKRP-RPAEFKALSKKP- 321
Query: 169 PAPPLLPLP 177
P P L LP
Sbjct: 322 PQPELGGLP 330
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 42.7 bits (99), Expect = 4e-04
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 65 PQVLAFPGKSSQPPSAGPTPPPSSRPPPS--PPRRRRPAWLQDEAEVAAALAGY--GFIN 120
P A PGK+S + GPT PPS P P+ PP++ PA + +A G
Sbjct: 450 PAQQAGPGKTSAQQT-GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTK 508
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
P GPA+PS Q + G S P +PG +P+ ++P+PA P
Sbjct: 509 PPPQQPGPAKPSPQ---QPG-----STKPPSQQPG---SAKPSAQQPSPAKP 549
Score = 35.8 bits (81), Expect = 0.049
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 19/126 (15%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTP--PPSSRP-----------PPSPPRRRRPAWLQDE 106
GE V+P + + S+PP PTP PP+ +P PP+ P Q
Sbjct: 291 GESVKPSLPS----PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 107 AEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRR 166
V + G P + GPA+P Q + P P A G+ ++
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQ--QTGSEKPSSEQPGPKALAQPPGVGKTPAQQ 404
Query: 167 PAPAPP 172
P PA P
Sbjct: 405 PGPAKP 410
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
Query: 74 SSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTG----EGPA 129
S+QPP P PPP PPP PP P + + +P +T +
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPK-KKLTVASPVTTATPLFDAVT 2460
Query: 130 RPSTQTLRRSGAFP----CESVGVP-GARPGRGAEGRPARRRPAPA-PPLLPLP 177
T + RS P C + P +P G RP P+ PP+ P P
Sbjct: 2461 TLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKP 2514
Score = 30.4 bits (67), Expect = 2.0
Identities = 33/135 (24%), Positives = 48/135 (35%), Gaps = 36/135 (26%)
Query: 71 PGKSSQPPSAGPTP--------PPSSR---------------PPPSPPRRRRPAWLQDEA 107
P +QPP G TP PP+ + P +P + P
Sbjct: 388 PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPG 447
Query: 108 EVAAALAGYGFINPSSTG--------EGPARPSTQTLRRSGAFPCE--SVGVPGARPGRG 157
++ A AG G + TG GPA+P Q + P + S P +PG
Sbjct: 448 KIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG-- 505
Query: 158 AEGRPARRRPAPAPP 172
+P ++P PA P
Sbjct: 506 -STKPPPQQPGPAKP 519
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 42.7 bits (99), Expect = 4e-04
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 65 PQVLAFPGKSSQPPSAGPTPPPSSRPPPS--PPRRRRPAWLQDEAEVAAALAGY--GFIN 120
P A PGK+S + GPT PPS P P+ PP++ PA + +A G
Sbjct: 450 PAQQAGPGKTSAQQT-GPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTK 508
Query: 121 PSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRRPAPAPP 172
P GPA+PS Q + G S P +PG +P+ ++P+PA P
Sbjct: 509 PPPQQPGPAKPSPQ---QPG-----STKPPSQQPG---SAKPSAQQPSPAKP 549
Score = 35.8 bits (81), Expect = 0.049
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 19/126 (15%)
Query: 60 GEKVQPQVLAFPGKSSQPPSAGPTP--PPSSRP-----------PPSPPRRRRPAWLQDE 106
GE V+P + + S+PP PTP PP+ +P PP+ P Q
Sbjct: 291 GESVKPSLPS----PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQP 346
Query: 107 AEVAAALAGYGFINPSSTGEGPARPSTQTLRRSGAFPCESVGVPGARPGRGAEGRPARRR 166
V + G P + GPA+P Q + P P A G+ ++
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQ--QTGSEKPSSEQPGPKALAQPPGVGKTPAQQ 404
Query: 167 PAPAPP 172
P PA P
Sbjct: 405 PGPAKP 410
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
Query: 74 SSQPPSAGPTPPPSSRPPPSPPRRRRPAWLQDEAEVAAALAGYGFINPSSTG----EGPA 129
S+QPP P PPP PPP PP P + + +P +T +
Sbjct: 2402 SAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPK-KKLTVASPVTTATPLFDAVT 2460
Query: 130 RPSTQTLRRSGAFP----CESVGVP-GARPGRGAEGRPARRRPAPA-PPLLPLP 177
T + RS P C + P +P G RP P+ PP+ P P
Sbjct: 2461 TLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKP 2514
Score = 30.4 bits (67), Expect = 2.0
Identities = 33/135 (24%), Positives = 48/135 (35%), Gaps = 36/135 (26%)
Query: 71 PGKSSQPPSAGPTP--------PPSSR---------------PPPSPPRRRRPAWLQDEA 107
P +QPP G TP PP+ + P +P + P
Sbjct: 388 PKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPG 447
Query: 108 EVAAALAGYGFINPSSTG--------EGPARPSTQTLRRSGAFPCE--SVGVPGARPGRG 157
++ A AG G + TG GPA+P Q + P + S P +PG
Sbjct: 448 KIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPG-- 505
Query: 158 AEGRPARRRPAPAPP 172
+P ++P PA P
Sbjct: 506 -STKPPPQQPGPAKP 519
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,390,815
Number of Sequences: 37866
Number of extensions: 1032630
Number of successful extensions: 20816
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 926
Number of HSP's that attempted gapping in prelim test: 11693
Number of HSP's gapped (non-prelim): 7068
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.