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Search of human proteins with 239755591
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755591 PREDICTED: similar to Putative ubiquitin-like
protein FUBI-like protein ENSP00000310146 [Homo sapiens]
(137 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755591 PREDICTED: similar to Putative ubiquitin-like prote... 279 6e-76
gi|239750097 PREDICTED: hypothetical protein XP_002347291 [Homo ... 198 1e-51
gi|4503659 ubiquitin-like protein fubi and ribosomal protein S30... 117 3e-27
gi|11024714 ubiquitin B precursor [Homo sapiens] 40 5e-04
gi|208022622 ubiquitin and ribosomal protein S27a precursor [Hom... 40 5e-04
gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo ... 40 5e-04
gi|67191208 ubiquitin C [Homo sapiens] 40 5e-04
gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo s... 40 5e-04
gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo ... 40 5e-04
gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens] 39 0.001
gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens] 39 0.001
gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens] 39 0.001
gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens] 37 0.005
gi|222352096 ubiquitin D [Homo sapiens] 34 0.043
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 33 0.096
gi|221316624 dystonin isoform 4 [Homo sapiens] 30 0.48
gi|221316622 dystonin isoform 3 [Homo sapiens] 30 0.48
gi|221316618 dystonin isoform 2 [Homo sapiens] 30 0.48
gi|34577047 dystonin isoform 1 [Homo sapiens] 30 0.48
gi|122937478 arrestin domain containing 5 [Homo sapiens] 30 0.81
gi|20357504 dystonin isoform 1eB precursor [Homo sapiens] 29 1.1
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 29 1.1
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 29 1.1
gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog [Homo... 29 1.1
gi|50811889 centrosomal protein 192kDa [Homo sapiens] 28 1.8
gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens] 28 2.4
gi|13173471 transmembrane protease, serine 3 isoform 1 [Homo sap... 28 3.1
gi|14602457 transmembrane protease, serine 3 isoform 3 [Homo sap... 28 3.1
gi|157419154 selectin P precursor [Homo sapiens] 27 6.9
gi|4503657 forkhead box H1 [Homo sapiens] 27 6.9
>gi|239755591 PREDICTED: similar to Putative ubiquitin-like protein
FUBI-like protein ENSP00000310146 [Homo sapiens]
Length = 137
Score = 279 bits (713), Expect = 6e-76
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI
Sbjct: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
Query: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQVNPVQPARYLWTTL 120
PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQVNPVQPARYLWTTL
Sbjct: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQVNPVQPARYLWTTL 120
Query: 121 HSSKQGEPNSSANHRCS 137
HSSKQGEPNSSANHRCS
Sbjct: 121 HSSKQGEPNSSANHRCS 137
>gi|239750097 PREDICTED: hypothetical protein XP_002347291 [Homo
sapiens]
Length = 143
Score = 198 bits (503), Expect = 1e-51
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI
Sbjct: 1 MRGRRRAWRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLI 60
Query: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGG 99
PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGG
Sbjct: 61 PEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGG 99
>gi|4503659 ubiquitin-like protein fubi and ribosomal protein S30
precursor [Homo sapiens]
Length = 133
Score = 117 bits (293), Expect = 3e-27
Identities = 58/71 (81%), Positives = 65/71 (91%)
Query: 29 YVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALT 88
+VRA+ELHT EVTG ETVAQ KAHVASLEG+ PED+VVLLAG+PL++EATLGQCGVEALT
Sbjct: 4 FVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALT 63
Query: 89 TLEVVGRRLGG 99
TLEV GR LGG
Sbjct: 64 TLEVAGRMLGG 74
>gi|11024714 ubiquitin B precursor [Homo sapiens]
Length = 229
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 90 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 97 LGG 99
GG
Sbjct: 150 RGG 152
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 97 LGG 99
GG
Sbjct: 226 RGG 228
>gi|208022622 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|4506713 ubiquitin and ribosomal protein S27a precursor [Homo
sapiens]
Length = 156
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|67191208 ubiquitin C [Homo sapiens]
Length = 685
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 90 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 149
Query: 97 LGG 99
GG
Sbjct: 150 RGG 152
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 242 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 301
Query: 97 LGG 99
GG
Sbjct: 302 RGG 304
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 318 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 377
Query: 97 LGG 99
GG
Sbjct: 378 RGG 380
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 394 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 453
Query: 97 LGG 99
GG
Sbjct: 454 RGG 456
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 470 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 529
Query: 97 LGG 99
GG
Sbjct: 530 RGG 532
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 546 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 605
Query: 97 LGG 99
GG
Sbjct: 606 RGG 608
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 622 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 681
Query: 97 LGG 99
GG
Sbjct: 682 RGG 684
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ + + ++ AG L++ TL ++ +TL +V R
Sbjct: 166 TLEVEPSDTIENVKAKIQDKEGIPSDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 225
Query: 97 LGG 99
GG
Sbjct: 226 RGG 228
>gi|4507761 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|77539055 ubiquitin and ribosomal protein L40 precursor [Homo
sapiens]
Length = 128
Score = 40.4 bits (93), Expect = 5e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
TLEV +T+ KA + EG+ P+ + ++ AG L++ TL ++ +TL +V R
Sbjct: 14 TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
Query: 97 LGG 99
GG
Sbjct: 74 RGG 76
>gi|239757745 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 WRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL 67
WRG+ AA L V +R + + TLEV + + KA + EG+ P+ + ++
Sbjct: 55 WRGSPVPQSAAATKLQI-FVKTLRGKTI-TLEVEPSDAIENVKAKIQDKEGIPPDQQRLI 112
Query: 68 LAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
AG L++ TL C ++ TL ++ R G
Sbjct: 113 FAGKQLEDGRTLSDCNIQKEPTLHLLLRLCG 143
>gi|239752254 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 WRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL 67
WRG+ AA L V +R + + TLEV + + KA + EG+ P+ + ++
Sbjct: 55 WRGSPVPQSAAATKLQI-FVKTLRGKTI-TLEVEPSDAIENVKAKIQDKEGIPPDQQRLI 112
Query: 68 LAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
AG L++ TL C ++ TL ++ R G
Sbjct: 113 FAGKQLEDGRTLSDCNIQKEPTLHLLLRLCG 143
>gi|239746765 PREDICTED: similar to hCG1790904 [Homo sapiens]
Length = 334
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 8 WRGAWRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL 67
WRG+ AA L V +R + + TLEV + + KA + EG+ P+ + ++
Sbjct: 55 WRGSPVPQSAAATKLQI-FVKTLRGKTI-TLEVEPSDAIENVKAKIQDKEGIPPDQQRLI 112
Query: 68 LAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
AG L++ TL C ++ TL ++ R G
Sbjct: 113 FAGKQLEDGRTLSDCNIQKEPTLHLLLRLCG 143
>gi|4826774 ISG15 ubiquitin-like modifier [Homo sapiens]
Length = 165
Score = 37.0 bits (84), Expect = 0.005
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 37 TLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRR 96
T EV +TVA K V+ LEG+ + + G PL+++ LG+ G++ L+T+ + R
Sbjct: 95 TYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRL 154
Query: 97 LGG 99
GG
Sbjct: 155 RGG 157
>gi|222352096 ubiquitin D [Homo sapiens]
Length = 165
Score = 33.9 bits (76), Expect = 0.043
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 36 HTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGR 95
H L+V +VAQ KA + + G+IPE ++V G L++ + G+ L +
Sbjct: 102 HLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACY 161
Query: 96 RLGG 99
+GG
Sbjct: 162 CIGG 165
Score = 30.8 bits (68), Expect = 0.36
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 17 AADLSLLCPQVAYVRARE--LHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQ 74
A + S LC +VR+ E L T + ++V + K HV S + +D+V+LL L+
Sbjct: 2 APNASCLC---VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILK 58
Query: 75 NEATLGQCGVEALTTLEV 92
+L G++ T+ +
Sbjct: 59 PRRSLSSYGIDKEKTIHL 76
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 32.7 bits (73), Expect = 0.096
Identities = 21/75 (28%), Positives = 30/75 (40%)
Query: 62 EDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQVNPVQPARYLWTTLH 121
ED +L + L+ EA L E+ T L VG+ L + + + +Q W T H
Sbjct: 1185 EDSDILTSSEALEEEAKLDVVTPESFTQLSRVGKPLIEDPAVDVIRKLLQLPNTKWPTHH 1244
Query: 122 SSKQGEPNSSANHRC 136
K HRC
Sbjct: 1245 CDKDPSQTGFKRHRC 1259
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 30.4 bits (67), Expect = 0.48
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L
Sbjct: 408 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILE 465
Query: 99 GNNCLSLQVNPVQ 111
N L V VQ
Sbjct: 466 CENLLRQHVIDVQ 478
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 30.4 bits (67), Expect = 0.48
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L
Sbjct: 419 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILE 476
Query: 99 GNNCLSLQVNPVQ 111
N L V VQ
Sbjct: 477 CENLLRQHVIDVQ 489
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 30.4 bits (67), Expect = 0.48
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L
Sbjct: 557 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILE 614
Query: 99 GNNCLSLQVNPVQ 111
N L V VQ
Sbjct: 615 CENLLRQHVIDVQ 627
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 30.4 bits (67), Expect = 0.48
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 39 EVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLG 98
EV LE + Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L
Sbjct: 379 EVERLEMLQQI-ANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILE 436
Query: 99 GNNCLSLQVNPVQ 111
N L V VQ
Sbjct: 437 CENLLRQHVIDVQ 449
>gi|122937478 arrestin domain containing 5 [Homo sapiens]
Length = 342
Score = 29.6 bits (65), Expect = 0.81
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 43 LETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEA--TLGQCGVEALTTLEVVGR 95
L T + V S+E ++PED+ + LAGS ++ + TL V+ + +E+VGR
Sbjct: 8 LSTPQPPMSVVKSIELVLPEDR-IYLAGSSIKGQVILTLNSTLVDPIVKVELVGR 61
>gi|20357504 dystonin isoform 1eB precursor [Homo sapiens]
Length = 3062
Score = 29.3 bits (64), Expect = 1.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 48 QSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQV 107
Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L N L V
Sbjct: 61 QQIANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHV 119
Query: 108 NPVQ 111
VQ
Sbjct: 120 IDVQ 123
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 29.3 bits (64), Expect = 1.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 48 QSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQV 107
Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L N L V
Sbjct: 61 QQIANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHV 119
Query: 108 NPVQ 111
VQ
Sbjct: 120 IDVQ 123
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 29.3 bits (64), Expect = 1.1
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 48 QSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQCGVEALTTLEVVGRRLGGNNCLSLQV 107
Q A+ + +I EDK++L AG+ LQ+++ + GV+ E+ G L N L V
Sbjct: 61 QQIANRVQRDSVICEDKLIL-AGNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHV 119
Query: 108 NPVQ 111
VQ
Sbjct: 120 IDVQ 123
>gi|88853865 isoamyl acetate-hydrolyzing esterase 1 homolog [Homo
sapiens]
Length = 248
Score = 29.3 bits (64), Expect = 1.1
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 44 ETVAQSKAHVASLEGL-IPEDKVVLLAGSPLQNEATLGQC---GVEALTTLEVVGRRLGG 99
E A K+ V L+ + IPE++V+L+ +PL A QC G + VVG
Sbjct: 106 EYAANLKSMVQYLKSVDIPENRVILITPTPLCETAWEEQCIIQGCKLNRLNSVVGEY--A 163
Query: 100 NNCLSLQVNPVQPARYLWTTLHSSK 124
N CL + + LWT + S+
Sbjct: 164 NACLQVAQDCGTDVLDLWTLMQDSQ 188
>gi|50811889 centrosomal protein 192kDa [Homo sapiens]
Length = 1941
Score = 28.5 bits (62), Expect = 1.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 33 RELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGSPLQNEATLGQC 82
R L TL TG T+ Q A A++ G +AG P+QN +G C
Sbjct: 668 RYLGTLPSTGSTTLPQCHAGNATVCGFSGGLPYPAVAGEPVQNSVAVGIC 717
>gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 1012
Score = 28.1 bits (61), Expect = 2.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 35 LHTLEVTGLETVAQSKAHVASLEGLIPEDKVVL-LAGSPLQNEATL 79
+HT G+E + H ++ L+ ED V +AG LQN+A L
Sbjct: 391 VHTAPAHGMEDYGVASQHNLPMDCLVDEDGVFTDVAGPELQNKAVL 436
>gi|13173471 transmembrane protease, serine 3 isoform 1 [Homo
sapiens]
Length = 454
Score = 27.7 bits (60), Expect = 3.1
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 18/104 (17%)
Query: 12 WRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGS 71
W+G A ++ C Q+ + L V+ LE Q + S++ L+P+DKV L S
Sbjct: 133 WKGHYA---NVACAQLGFPSYVSSDNLRVSSLE--GQFREEFVSIDHLLPDDKVTALHHS 187
Query: 72 PLQNEATLGQCGVEALTTLEVV---------GRRLGGNNCLSLQ 106
E C + TL+ R +GGN L Q
Sbjct: 188 VYVREG----CASGHVVTLQCTACGHRRGYSSRIVGGNMSLLSQ 227
>gi|14602457 transmembrane protease, serine 3 isoform 3 [Homo
sapiens]
Length = 344
Score = 27.7 bits (60), Expect = 3.1
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 18/104 (17%)
Query: 12 WRGGGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIPEDKVVLLAGS 71
W+G A ++ C Q+ + L V+ LE Q + S++ L+P+DKV L S
Sbjct: 133 WKGHYA---NVACAQLGFPSYVSSDNLRVSSLE--GQFREEFVSIDHLLPDDKVTALHHS 187
Query: 72 PLQNEATLGQCGVEALTTLEVV---------GRRLGGNNCLSLQ 106
E C + TL+ R +GGN L Q
Sbjct: 188 VYVREG----CASGHVVTLQCTACGHRRGYSSRIVGGNMSLLSQ 227
>gi|157419154 selectin P precursor [Homo sapiens]
Length = 830
Score = 26.6 bits (57), Expect = 6.9
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 12/84 (14%)
Query: 65 VVLLAGSPLQNEATLGQCG--------VEALTTLEVVGRRLGGNN---CLSLQVNPVQ-P 112
V++ PL N + QC V + LE + + N CL+ Q P++ P
Sbjct: 209 VLMNCSHPLGNFSFNSQCSFHCTDGYQVNGPSKLECLASGIWTNKPPQCLAAQCPPLKIP 268
Query: 113 ARYLWTTLHSSKQGEPNSSANHRC 136
R T LHS+K + SS + C
Sbjct: 269 ERGNMTCLHSAKAFQHQSSCSFSC 292
>gi|4503657 forkhead box H1 [Homo sapiens]
Length = 365
Score = 26.6 bits (57), Expect = 6.9
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 15 GGAADLSLLCPQVAYVRARELHTLEVTGLETVAQSKAHVASLEGLIP 61
GGA S L P+ RA LH L+ T + S H ASL G +P
Sbjct: 235 GGAIGPSTLSPEP---RAWPLHLLQGTAVPGGRSSGGHRASLWGQLP 278
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,158,576
Number of Sequences: 37866
Number of extensions: 188002
Number of successful extensions: 532
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 46
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.