Guide to the Human Genome
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Name: FLJ41350 Sequence: fasta or formatted (103aa) NCBI GI: 239755425
Description:

PREDICTED: hypothetical protein isoform 1

Not currently referenced in the text

Other entries for this name:
alt mRNA {103aa} PREDICTED: hypothetical protein isoform 1
alt prot {120aa} PREDICTED: hypothetical protein isoform 2
alt mRNA {103aa} PREDICTED: hypothetical protein isoform 1
alt prot {120aa} PREDICTED: hypothetical protein isoform 2
alt prot {120aa} PREDICTED: hypothetical protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8          8           4
 C cysteine            1.0          1           1
 D aspartate           1.0          1           1
 E glutamate           2.9          3           1
 F phenylalanine       3.9          4           1
 G glycine             6.8          7           1
 H histidine           2.9          3           1
 I isoleucine          2.9          3           1
 K lysine              2.9          3           1
 L leucine            10.7         11           2
 M methionine          1.9          2           1
 N asparagine          2.9          3           1
 P proline            16.5         17           2
 Q glutamine           2.9          3           1
 R arginine            8.7          9           2
 S serine              6.8          7           1
 T threonine           3.9          4           1
 V valine              5.8          6           2
 W tryptophan          5.8          6           2
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein isoform 1 
FLJ41350              1.000   PREDICTED: hypothetical protein isoform 1 
FLJ41350              1.000   PREDICTED: hypothetical protein isoform 1 
FLJ41350              0.921   PREDICTED: hypothetical protein isoform 2 
FLJ41350              0.921   PREDICTED: hypothetical protein isoform 2 
FLJ41350              0.921   PREDICTED: hypothetical protein isoform 2 
MAGED1                0.039   melanoma antigen family D, 1 isoform a 
MAGED1                0.039   melanoma antigen family D, 1 isoform b 
MAGED1                0.039   melanoma antigen family D, 1 isoform b 
C21orf58              0.030   hypothetical protein LOC54058 
COPZ2                 0.025   coatomer protein complex, subunit zeta 2 
CSF2RB                0.025   colony stimulating factor 2 receptor, beta precursor ...
FAM157C               0.025   PREDICTED: family with sequence similarity 157, mem...
FAM157A               0.020   family with sequence similarity 157, member A [Homo...
SEC14L4               0.020   SEC14p-like protein TAP3 isoform b 
SEC14L4               0.020   SEC14p-like protein TAP3 isoform a 
LOC400553             0.020   PREDICTED: FLJ44904 protein 
LOC100132858          0.020   PREDICTED: similar to family with sequence similari...
FAM157B               0.020   family with sequence similarity 157, member B [Homo...
LOC644246             0.020   PREDICTED: hypothetical protein LOC644246 
FLJ39639              0.015   PREDICTED: hypothetical protein FLJ39639 
FLJ39639              0.015   PREDICTED: hypothetical protein FLJ39639 
FLJ39639              0.015   PREDICTED: hypothetical protein LOC283876 
BEND4                 0.015   BEN domain containing 4 isoform b 
BEND4                 0.015   BEN domain containing 4 isoform a 
LOC100287723          0.015   PREDICTED: hypothetical protein XP_002342271 
MRPL2                 0.015   mitochondrial ribosomal protein L2 
SLC35E2               0.015   solute carrier family 35, member E2 
ATP13A2               0.010   ATPase type 13A2 isoform 3 
VPS37C                0.010   vacuolar protein sorting 37C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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